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Lsi10G005890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:8553344..8554079
RNA-Seq ExpressionLsi10G005890
SyntenyLsi10G005890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651933.1 hypothetical protein Csa_006731 [Cucumis sativus]1.3e-5265.82Show/hide
Query:  MPHDQSNITLQYHIPCQENP-TTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIG
        MP +QS+ITL+Y IPCQENP  TKVL   IV++    VG +DYGSFFVS+ALEEFRCV +D+ N  Y  VTITSSQI+FV  +DH E   TTQ+G CIIG
Subjt:  MPHDQSNITLQYHIPCQENP-TTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIG

Query:  GIEEGDEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDD
        GIEEG+EI+CG SLYPMEFY++FTS+RVW F S D +GL+L+APMG+YT ISS+FP D
Subjt:  GIEEGDEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDD

XP_008457793.2 PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo]5.5e-4360.28Show/hide
Query:  QENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPM
        QE+P  K      +  +  +VG +DYGSFFVS+ALEEFRCV  D+ N  Y PVTITSS+I+FV  IDH E   TT++G CIIGGIEEG EI+CG SLYPM
Subjt:  QENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPM

Query:  EFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDD
        +FY++FTS+RVW F S D +GL+L+APMG+YT ISS+FP +
Subjt:  EFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDD

XP_022928046.1 uncharacterized protein LOC111434948 [Cucurbita moschata]2.8e-3150.32Show/hide
Query:  QSNITLQYHIPCQENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEG
        Q +  +++  P   +P TK++ T   + D  N G IDY S FVS  L  FR +   L N  +A +TIT+SQI+F+VE   +EV+LTTQ   CIIGG   G
Subjt:  QSNITLQYHIPCQENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEG

Query:  DEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDDYY
        DE E    L P EF+ +FTSER+WLFKSYDP G+ L+APMG+Y  ISSYFP+D+Y
Subjt:  DEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDDYY

XP_031737287.1 uncharacterized protein LOC116402216 [Cucumis sativus]1.3e-5265.82Show/hide
Query:  MPHDQSNITLQYHIPCQENP-TTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIG
        MP +QS+ITL+Y IPCQENP  TKVL   IV++    VG +DYGSFFVS+ALEEFRCV +D+ N  Y  VTITSSQI+FV  +DH E   TTQ+G CIIG
Subjt:  MPHDQSNITLQYHIPCQENP-TTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIG

Query:  GIEEGDEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDD
        GIEEG+EI+CG SLYPMEFY++FTS+RVW F S D +GL+L+APMG+YT ISS+FP D
Subjt:  GIEEGDEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDD

XP_031737417.1 uncharacterized protein LOC116402255 [Cucumis sativus]3.3e-4061.72Show/hide
Query:  VQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPMEFYRSFTSERVWL
        + ++H NVG +DYGSFFVS+AL++FRCV +D+ +  Y P+TI SSQI FVV+ D  E   T ++G CIIGGIEEGDEI CG S YPMEFY+ FTS+RVW 
Subjt:  VQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPMEFYRSFTSERVWL

Query:  FKSYDPSGLMLVAPMGMYTQISSYFPDD
        F S D +GL+L+APMG+YT ISS+FP D
Subjt:  FKSYDPSGLMLVAPMGMYTQISSYFPDD

TrEMBL top hitse value%identityAlignment
A0A0A0LJU4 Uncharacterized protein1.2e-4364.84Show/hide
Query:  VQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPMEFYRSFTSERVWL
        + ++   VG +DYGSFFVS+ALEEFRCV +D+ N  Y  VTITSSQI+FV  +DH E   TTQ+G CIIGGIEEG+EI+CG SLYPMEFY++FTS+RVW 
Subjt:  VQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPMEFYRSFTSERVWL

Query:  FKSYDPSGLMLVAPMGMYTQISSYFPDD
        F S D +GL+L+APMG+YT ISS+FP D
Subjt:  FKSYDPSGLMLVAPMGMYTQISSYFPDD

A0A0A0LMQ7 Uncharacterized protein1.6e-4061.72Show/hide
Query:  VQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPMEFYRSFTSERVWL
        + ++H NVG +DYGSFFVS+AL++FRCV +D+ +  Y P+TI SSQI FVV+ D  E   T ++G CIIGGIEEGDEI CG S YPMEFY+ FTS+RVW 
Subjt:  VQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPMEFYRSFTSERVWL

Query:  FKSYDPSGLMLVAPMGMYTQISSYFPDD
        F S D +GL+L+APMG+YT ISS+FP D
Subjt:  FKSYDPSGLMLVAPMGMYTQISSYFPDD

A0A1S3C6G9 uncharacterized protein LOC1034973972.7e-4360.28Show/hide
Query:  QENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPM
        QE+P  K      +  +  +VG +DYGSFFVS+ALEEFRCV  D+ N  Y PVTITSS+I+FV  IDH E   TT++G CIIGGIEEG EI+CG SLYPM
Subjt:  QENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECGFSLYPM

Query:  EFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDD
        +FY++FTS+RVW F S D +GL+L+APMG+YT ISS+FP +
Subjt:  EFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDD

A0A6J1EJ67 uncharacterized protein LOC1114349481.4e-3150.32Show/hide
Query:  QSNITLQYHIPCQENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEG
        Q +  +++  P   +P TK++ T   + D  N G IDY S FVS  L  FR +   L N  +A +TIT+SQI+F+VE   +EV+LTTQ   CIIGG   G
Subjt:  QSNITLQYHIPCQENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEG

Query:  DEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDDYY
        DE E    L P EF+ +FTSER+WLFKSYDP G+ L+APMG+Y  ISSYFP+D+Y
Subjt:  DEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDDYY

A0A6J1I7S4 uncharacterized protein LOC1114703854.0e-3150Show/hide
Query:  DQSNITLQYHIPCQENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEE
        +Q +  +++  P   +P TK++ T   + D  N G IDY S FVS  L  FR +   L N  +A +TIT+SQI+  VE   LEV+LTTQ   CIIGG   
Subjt:  DQSNITLQYHIPCQENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEE

Query:  GDEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDDYY
        GDE E    L P EF+ +FTSER+WLFKSYDP G+ L+APMG+Y  ISSYFP+D+Y
Subjt:  GDEIECGFSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDDYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACACGACCAAAGTAATATCACCCTTCAATATCACATTCCTTGCCAAGAAAATCCAACCACAAAAGTGTTATCAACATTTATAGTTCAAGATGATCATCATAATGT
TGGCCAAATTGACTATGGTTCCTTCTTTGTCTCAATTGCTTTAGAGGAGTTTCGATGTGTTGCAAAAGACTTAAACAATATTGGTTATGCTCCAGTTACTATTACAAGTT
CACAAATCAGATTCGTTGTTGAAATTGATCATCTTGAAGTTATTCTAACCACCCAAGATGGATATTGCATAATTGGAGGCATTGAAGAAGGAGATGAAATTGAATGTGGA
TTTAGTCTTTATCCAATGGAATTCTACCGTAGTTTCACATCGGAAAGAGTATGGTTATTCAAGTCATATGATCCCAGTGGTTTGATGTTGGTTGCTCCTATGGGAATGTA
TACTCAGATTTCTTCATATTTTCCCGATGATTACTATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACACGACCAAAGTAATATCACCCTTCAATATCACATTCCTTGCCAAGAAAATCCAACCACAAAAGTGTTATCAACATTTATAGTTCAAGATGATCATCATAATGT
TGGCCAAATTGACTATGGTTCCTTCTTTGTCTCAATTGCTTTAGAGGAGTTTCGATGTGTTGCAAAAGACTTAAACAATATTGGTTATGCTCCAGTTACTATTACAAGTT
CACAAATCAGATTCGTTGTTGAAATTGATCATCTTGAAGTTATTCTAACCACCCAAGATGGATATTGCATAATTGGAGGCATTGAAGAAGGAGATGAAATTGAATGTGGA
TTTAGTCTTTATCCAATGGAATTCTACCGTAGTTTCACATCGGAAAGAGTATGGTTATTCAAGTCATATGATCCCAGTGGTTTGATGTTGGTTGCTCCTATGGGAATGTA
TACTCAGATTTCTTCATATTTTCCCGATGATTACTATGATTGA
Protein sequenceShow/hide protein sequence
MPHDQSNITLQYHIPCQENPTTKVLSTFIVQDDHHNVGQIDYGSFFVSIALEEFRCVAKDLNNIGYAPVTITSSQIRFVVEIDHLEVILTTQDGYCIIGGIEEGDEIECG
FSLYPMEFYRSFTSERVWLFKSYDPSGLMLVAPMGMYTQISSYFPDDYYD