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Lsi10G005900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005900
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:8556361..8558276
RNA-Seq ExpressionLsi10G005900
SyntenyLsi10G005900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045846.1 uncharacterized protein E6C27_scaffold243G003790 [Cucumis melo var. makuwa]2.5e-4353.37Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        ML+++M+P EPFSD VSIMHRFD FA+F CNP +FSI I +  P SI+TL +LPQFFT F C+Q HY  FS+D FY  ++LHKR  + S    LAEFRF 
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIMEHSSPQLLPISQPD-RYESVGKIDYGAFISLDLEEFRRLIVILDNTKAYGGISLYPWEFYYNFTSKRL
        MALEFHS    H SPQLL   QP   YE  GKI YG F+SL+L +FR +++I DNTK +    +   EF +    K +
Subjt:  MALEFHSPIMEHSSPQLLPISQPD-RYESVGKIDYGAFISLDLEEFRRLIVILDNTKAYGGISLYPWEFYYNFTSKRL

XP_016902147.1 PREDICTED: uncharacterized protein LOC103497437 [Cucumis melo]1.4e-5750.61Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        ML+++M+P EPFSD VSIMHRFD FA+F CNP +FSI I +  P SI+TL +LPQFFT F C+Q HY  FS+D FY  ++LHKR  + S    LAEFRF 
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIMEHSSPQLLPISQPD-RYESVGKIDYGAFISLDLEEFRRLIVILDNTKAY----------------------------------------G
        MALEFHS    H SPQLL   QP   YE  GKI YG F+SL+L +FR +++I DNTK +                                        G
Subjt:  MALEFHSPIMEHSSPQLLPISQPD-RYESVGKIDYGAFISLDLEEFRRLIVILDNTKAY----------------------------------------G

Query:  GISLYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQ
         + L P E Y+NFTSKRLWLF S+ P G+TLVAP GLY NIS+FFPQ
Subjt:  GISLYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQ

XP_022928046.1 uncharacterized protein LOC111434948 [Cucurbita moschata]1.4e-4641.83Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        M++LE      F  A+SIMHR +  AFF+C+P +FSI++ Q  P ++ TL + P+FF  ++C+Q+HYV FSID FY  I+  + + F+S TL +AE +  
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------
         A+EF  P + H   +L+P S P+R  + G IDY +F+S DL  FRRL+  L+N + AY                            GG +         
Subjt:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------

Query:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN
         L PWEF+YNFTS+RLWLF+S+ P G+TL+APMGLY +ISS+FP++FY  N
Subjt:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN

XP_022971718.1 uncharacterized protein LOC111470385 [Cucurbita maxima]3.5e-4541.43Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        M++LE      F  A+SIMHR +  AFF+C+P +FSI++ Q  P ++  L + P+FF  ++C+Q HYV FSID FY  I+  + + F+S TL +AE +  
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------
         A+EF  P + H   +L+P S P+R  + G IDY +F+S DL  FRRL+  L+N + AY                            GG +         
Subjt:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------

Query:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN
         L PWEF+YNFTS+RLWLF+S+ P G+TL+APMGLY +ISS+FP++FY  N
Subjt:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN

XP_023513336.1 uncharacterized protein LOC111777844 [Cucurbita pepo subsp. pepo]1.9e-4641.83Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        M++LE      F  A+SIMHR +  AFF+C+P +FSI++ Q  P ++ TL + P+FF  ++C+Q+HYV FSID FY  I+  + + F+S TL +AE +  
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------
         A+EF  P + H   +L+P S P+R  + G IDY +F+S DL  FRRL+  L+N + AY                            GG +         
Subjt:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------

Query:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN
         L PWEF+YNFTS+RLWLF+S+ P G+TL+APMGLY +ISS+FP++FY  N
Subjt:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN

TrEMBL top hitse value%identityAlignment
A0A1S4E1P6 uncharacterized protein LOC1034974376.6e-5850.61Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        ML+++M+P EPFSD VSIMHRFD FA+F CNP +FSI I +  P SI+TL +LPQFFT F C+Q HY  FS+D FY  ++LHKR  + S    LAEFRF 
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIMEHSSPQLLPISQPD-RYESVGKIDYGAFISLDLEEFRRLIVILDNTKAY----------------------------------------G
        MALEFHS    H SPQLL   QP   YE  GKI YG F+SL+L +FR +++I DNTK +                                        G
Subjt:  MALEFHSPIMEHSSPQLLPISQPD-RYESVGKIDYGAFISLDLEEFRRLIVILDNTKAY----------------------------------------G

Query:  GISLYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQ
         + L P E Y+NFTSKRLWLF S+ P G+TLVAP GLY NIS+FFPQ
Subjt:  GISLYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQ

A0A5A7TUN5 Uncharacterized protein1.2e-4353.37Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        ML+++M+P EPFSD VSIMHRFD FA+F CNP +FSI I +  P SI+TL +LPQFFT F C+Q HY  FS+D FY  ++LHKR  + S    LAEFRF 
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIMEHSSPQLLPISQPD-RYESVGKIDYGAFISLDLEEFRRLIVILDNTKAYGGISLYPWEFYYNFTSKRL
        MALEFHS    H SPQLL   QP   YE  GKI YG F+SL+L +FR +++I DNTK +    +   EF +    K +
Subjt:  MALEFHSPIMEHSSPQLLPISQPD-RYESVGKIDYGAFISLDLEEFRRLIVILDNTKAYGGISLYPWEFYYNFTSKRL

A0A6J1EJ67 uncharacterized protein LOC1114349486.9e-4741.83Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        M++LE      F  A+SIMHR +  AFF+C+P +FSI++ Q  P ++ TL + P+FF  ++C+Q+HYV FSID FY  I+  + + F+S TL +AE +  
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------
         A+EF  P + H   +L+P S P+R  + G IDY +F+S DL  FRRL+  L+N + AY                            GG +         
Subjt:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------

Query:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN
         L PWEF+YNFTS+RLWLF+S+ P G+TL+APMGLY +ISS+FP++FY  N
Subjt:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN

A0A6J1G821 uncharacterized protein LOC1114515955.8e-3036.25Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        ML+ E+    PF  A+S+MHR    A  +  P+ F+I+IPQ+F R  V L I PQFF  FSCNQ HY   S+     N+    R   N  TL    F+  
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIME---HSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNT-KAY----------------------------GGI-------
        M LEF   +++   H S   +PIS P   + VG+IDY +F+S++L+ F+ L   LDN  +AY                            GG+       
Subjt:  MALEFHSPIME---HSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNT-KAY----------------------------GGI-------

Query:  ---SLYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISS-FFPQNF
           +LYP +FY N  S RLWLF+S   + + L+AP+GL+A+ SS +FP +F
Subjt:  ---SLYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISS-FFPQNF

A0A6J1I7S4 uncharacterized protein LOC1114703851.7e-4541.43Show/hide
Query:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ
        M++LE      F  A+SIMHR +  AFF+C+P +FSI++ Q  P ++  L + P+FF  ++C+Q HYV FSID FY  I+  + + F+S TL +AE +  
Subjt:  MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQ

Query:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------
         A+EF  P + H   +L+P S P+R  + G IDY +F+S DL  FRRL+  L+N + AY                            GG +         
Subjt:  MALEFHSPIMEHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTK-AY----------------------------GGIS---------

Query:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN
         L PWEF+YNFTS+RLWLF+S+ P G+TL+APMGLY +ISS+FP++FY  N
Subjt:  -LYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTGTTGGAGATGAACCCCTTGGAACCATTCTCCGATGCAGTTTCCATAATGCATAGATTCGATTCATTCGCTTTCTTCAGATGCAATCCCGCAGTATTCTCAAT
CCTAATCCCTCAACATTTCCCTCGTTCCATTGTAACCTTAATAATCTTACCTCAATTCTTCACCAGTTTCTCTTGCAACCAAATCCATTACGTTGCCTTCTCCATCGACC
AATTTTACCGCAACATCATGCTTCACAAACGCCATCACTTTAATTCCTTCACTCTCTGTCTTGCCGAATTTCGATTCCAAATGGCCCTTGAATTTCATTCCCCAATTATG
GAACATTCATCTCCACAATTGCTACCTATATCGCAACCTGATCGTTATGAGAGCGTGGGTAAAATTGATTATGGAGCTTTTATCTCTCTTGATTTAGAAGAATTTCGACG
TCTTATTGTAATCTTGGATAATACTAAAGCTTATGGTGGAATAAGTCTATATCCGTGGGAATTCTACTATAATTTCACATCGAAAAGATTGTGGTTATTCAGGTCATTTT
ATCCCAGTGGTATTACACTTGTTGCTCCCATGGGATTATATGCTAACATTTCATCTTTTTTTCCCCAAAATTTCTATACGAGAAAT
mRNA sequenceShow/hide mRNA sequence
AGAGGCGGCCATGTTAGTGTTGGAGATGAACCCCTTGGAACCATTCTCCGATGCAGTTTCCATAATGCATAGATTCGATTCATTCGCTTTCTTCAGATGCAATCCCGCAG
TATTCTCAATCCTAATCCCTCAACATTTCCCTCGTTCCATTGTAACCTTAATAATCTTACCTCAATTCTTCACCAGTTTCTCTTGCAACCAAATCCATTACGTTGCCTTC
TCCATCGACCAATTTTACCGCAACATCATGCTTCACAAACGCCATCACTTTAATTCCTTCACTCTCTGTCTTGCCGAATTTCGATTCCAAATGGCCCTTGAATTTCATTC
CCCAATTATGGAACATTCATCTCCACAATTGCTACCTATATCGCAACCTGATCGTTATGAGAGCGTGGGTAAAATTGATTATGGAGCTTTTATCTCTCTTGATTTAGAAG
AATTTCGACGTCTTATTGTAATCTTGGATAATACTAAAGCTTATGGTGGAATAAGTCTATATCCGTGGGAATTCTACTATAATTTCACATCGAAAAGATTGTGGTTATTC
AGGTCATTTTATCCCAGTGGTATTACACTTGTTGCTCCCATGGGATTATATGCTAACATTTCATCTTTTTTTCCCCAAAATTTCTATACGAGAAAT
Protein sequenceShow/hide protein sequence
MLVLEMNPLEPFSDAVSIMHRFDSFAFFRCNPAVFSILIPQHFPRSIVTLIILPQFFTSFSCNQIHYVAFSIDQFYRNIMLHKRHHFNSFTLCLAEFRFQMALEFHSPIM
EHSSPQLLPISQPDRYESVGKIDYGAFISLDLEEFRRLIVILDNTKAYGGISLYPWEFYYNFTSKRLWLFRSFYPSGITLVAPMGLYANISSFFPQNFYTRN