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Lsi10G005940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSynechocystis YCF37
Genome locationchr10:8579924..8580427
RNA-Seq ExpressionLsi10G005940
SyntenyLsi10G005940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148045.1 uncharacterized protein LOC101208092 [Cucumis sativus]6.1e-6990.42Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE
        MASTAISP LQILRPRCR + T+RA AVKS  ESLSA RTRRQTLLFLTATATAAVVGRENP MAEDIPLFGLRKKLKKVEEEAE IVREGFEAAEKGLE
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETA+NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
XP_008457854.1 PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo]2.4e-6588.02Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE
        MASTAISP LQILRPRCR + T+RA AVK   ESLSA RTRRQTLLFL  TATAAVVGRENP MAEDIPLFGLRKKLKKVEEEAE IVREGFEAAEKGLE
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETA++FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
XP_022928047.1 uncharacterized protein LOC111434949 [Cucurbita moschata]2.2e-6688.55Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE
        MAST ISP+LQIL+PRCR NIT+RA +VK  PESLSA RTRRQTLL LTATATAAVVGRENP MAEDIPLFGLRKKLKKVEEEAE IVREGFEAAEKGLE
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
        TAERGIVTAE+GI+ AERGIETAEKEIE+A+NFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
XP_022971729.1 uncharacterized protein LOC111470397 [Cucurbita maxima]5.7e-6788.62Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE
        MAST ISP+LQIL+PRCR NIT+RA +VK  PESLSA RTRRQTLL LTATATAAVVGRENP MAE+IPLFGLRKKLKKVEEEAE IVREGFEAAEKGLE
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+ AERGIETAEKEIE+A+NFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
XP_038900735.1 uncharacterized protein LOC120087852 [Benincasa hispida]8.0e-6992.26Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTAT-ATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGL
        MASTAISPVLQIL  RCR NIT+RA AVKS PESLSA RTRRQTLLFLTAT A AAVVGRENP +AEDIPLFGLRKKLKKVEEEAE IVREGFEAAEKGL
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTAT-ATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGL

Query:  ETAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        ETAERGIVTAEQGIVAAERGIETAEKEIETA+NFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  ETAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
TrEMBL top hitse value%identityAlignment
A0A0A0LJU7 Uncharacterized protein3.0e-6990.42Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE
        MASTAISP LQILRPRCR + T+RA AVKS  ESLSA RTRRQTLLFLTATATAAVVGRENP MAEDIPLFGLRKKLKKVEEEAE IVREGFEAAEKGLE
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETA+NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
A0A1S3C6G5 uncharacterized protein LOC1034974391.2e-6588.02Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE
        MASTAISP LQILRPRCR + T+RA AVK   ESLSA RTRRQTLLFL  TATAAVVGRENP MAEDIPLFGLRKKLKKVEEEAE IVREGFEAAEKGLE
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETA++FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
A0A5D3CRC5 Synechocystis YCF371.2e-6588.02Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE
        MASTAISP LQILRPRCR + T+RA AVK   ESLSA RTRRQTLLFL  TATAAVVGRENP MAEDIPLFGLRKKLKKVEEEAE IVREGFEAAEKGLE
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETA++FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
A0A6J1EIT8 uncharacterized protein LOC1114349491.0e-6688.55Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE
        MAST ISP+LQIL+PRCR NIT+RA +VK  PESLSA RTRRQTLL LTATATAAVVGRENP MAEDIPLFGLRKKLKKVEEEAE IVREGFEAAEKGLE
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
        TAERGIVTAE+GI+ AERGIETAEKEIE+A+NFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
A0A6J1I9D9 uncharacterized protein LOC1114703972.8e-6788.62Show/hide
Query:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE
        MAST ISP+LQIL+PRCR NIT+RA +VK  PESLSA RTRRQTLL LTATATAAVVGRENP MAE+IPLFGLRKKLKKVEEEAE IVREGFEAAEKGLE
Subjt:  MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+ AERGIETAEKEIE+A+NFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23670.1 homolog of Synechocystis YCF371.7e-3253.76Show/hide
Query:  MASTAISPVLQ----ILRPRCRSNITIRATAVKS-KP--ESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFE
        MAST    +L      L+ RC     +   A  S KP   S S     R+ LLF + TA   V G +   MAE+IPLFG+RKKLKK EEEA  IV+EGFE
Subjt:  MASTAISPVLQ----ILRPRCRSNITIRATAVKS-KP--ESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFE

Query:  AAEKGLETAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
         AEKG++ AE+       G+ AAERG+ETAEKEI TA++F  L+QAGAV  AE VGVLVATS+VNGILGPE Q
Subjt:  AAEKGLETAERGIVTAEQGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACAGCAATCTCACCTGTCCTCCAAATCCTCCGACCACGATGCCGATCAAACATCACCATTCGCGCCACCGCAGTGAAATCGAAGCCGGAATCTCTCTCCGC
CGACAGAACGCGGCGACAGACACTGTTGTTTCTGACAGCGACGGCGACGGCGGCGGTCGTGGGGAGAGAGAATCCGGTAATGGCGGAGGACATTCCTCTGTTCGGTTTGA
GGAAGAAGCTGAAGAAGGTGGAGGAGGAGGCGGAGGTGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATTGTGACGGCGGAG
CAGGGGATTGTAGCGGCGGAGAGAGGGATTGAAACGGCGGAGAAAGAAATCGAAACGGCGTTGAATTTCGGAGCGCTATCGCAGGCTGGGGCCGTCGCCGGAGCTGAGGT
CGTTGGAGTTCTCGTTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACAGCAATCTCACCTGTCCTCCAAATCCTCCGACCACGATGCCGATCAAACATCACCATTCGCGCCACCGCAGTGAAATCGAAGCCGGAATCTCTCTCCGC
CGACAGAACGCGGCGACAGACACTGTTGTTTCTGACAGCGACGGCGACGGCGGCGGTCGTGGGGAGAGAGAATCCGGTAATGGCGGAGGACATTCCTCTGTTCGGTTTGA
GGAAGAAGCTGAAGAAGGTGGAGGAGGAGGCGGAGGTGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATTGTGACGGCGGAG
CAGGGGATTGTAGCGGCGGAGAGAGGGATTGAAACGGCGGAGAAAGAAATCGAAACGGCGTTGAATTTCGGAGCGCTATCGCAGGCTGGGGCCGTCGCCGGAGCTGAGGT
CGTTGGAGTTCTCGTTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA
Protein sequenceShow/hide protein sequence
MASTAISPVLQILRPRCRSNITIRATAVKSKPESLSADRTRRQTLLFLTATATAAVVGRENPVMAEDIPLFGLRKKLKKVEEEAEVIVREGFEAAEKGLETAERGIVTAE
QGIVAAERGIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS