; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G005970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G005970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionB3 domain-containing transcription factor VRN1-like
Genome locationchr10:8599808..8604631
RNA-Seq ExpressionLsi10G005970
SyntenyLsi10G005970
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045854.1 B3 domain-containing transcription factor VRN1-like [Cucumis melo var. makuwa]2.2e-14877.72Show/hide
Query:  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD
        LFSSPNPHFFK+ILHQTLTQ+KLELPNKFVKNNG S+L+NK TL LPDGANWK+QLKK D KI F RGWPEFVQFY+VQPG+ LVFQLK ICCFNVLIFD
Subjt:  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD

Query:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNYSGRQSNYRGS
        T+ATEIDYP+  L  +I KS NE EEES+QI+NE+VLKKRR EKEE++ AY SLR +KKM+RKN K+   K+RGITS  DEDEEDLET+ S RQSN+RG+
Subjt:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNYSGRQSNYRGS

Query:  ---------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRS
                 VSPESMRPMNPRKTP ALT NQLAVK+RAS FK RRNNPSFMVTMRPSYIQTGNYL         SLPR FGERYIKESVDVKLEVGDGRS
Subjt:  ---------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRS

Query:  WRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN
        WRVWCGVRWAFTRRRTELKGGWKRF  DNELKEGDICVFELM KN  V FKVAIFRLPN
Subjt:  WRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN

XP_008457957.2 PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]1.3e-14876.69Show/hide
Query:  KQKSLCLMA-LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKA
        K   + LMA LFSSPNPHFFK+ILHQTLTQ+KLELPNKFVKNNG S+L+NK TL LPDGANWK+QLKK D KI F RGWPEFVQFY+VQPG+ LVFQLK 
Subjt:  KQKSLCLMA-LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKA

Query:  ICCFNVLIFDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNY
        ICCFNVLIFDT+ATEIDYP+  L  +I KS NE EEES+QI+NE+VLKKRR EKEE++ AY SLR +KKM+RKN K+   K+RGITS  DEDEEDLET+ 
Subjt:  ICCFNVLIFDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNY

Query:  SGRQSNYRGS---------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVD
        S RQSN+RG+         VSPESMRPMNPRKTP ALT NQLAVK+RAS FK RRNNPSFMVTMRPSYIQTGNYL         SLPR FGERYIKESVD
Subjt:  SGRQSNYRGS---------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVD

Query:  VKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN
        VKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRF  DNELKEGDICVFELM KN  V FKVAIFRLPN
Subjt:  VKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN

XP_031736562.1 B3 domain-containing transcription factor VRN1-like [Cucumis sativus]1.7e-14877.07Show/hide
Query:  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD
        LF SPNPHFFK+ILHQTLTQ+KL+LPNKFVKNNG SLL+NK TL LPDGANWK+QLKKLD KICF RGWPEFVQFY+VQPGH LVFQLK ICCFNVLIFD
Subjt:  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD

Query:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKS-AAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNYSGRQSNYR-
        T+ATEIDYP+ +L  LI KS NE EEES+QI+NE+VLKKRR EKEE++  AY SLR +KKM+RKN K+   K+RGITSDEDE   DLE + S RQSN+R 
Subjt:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKS-AAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNYSGRQSNYR-

Query:  --------GSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGR
                G VSPESMRPMNPRKTP ALT NQLAVK+RASWFK RRNNPSFMVTMRPSYIQTGNYL         SLPR FGE+YIKESVDVKLEVGDGR
Subjt:  --------GSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGR

Query:  SWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE
         WRVWCGVRWAFTRRRTELKGGWKRF  DNELKEGDICVFELM KN  V FKVAIFRLP+ E
Subjt:  SWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE

XP_038902136.1 B3 domain-containing transcription factor VRN1-like isoform X1 [Benincasa hispida]5.5e-13968.01Show/hide
Query:  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI
        MALFSSPNPHFFKIILHQ L Q+KL+LPNKFVKNNG SLL++KATL LPDGANW +QLK LD KICFLRGWPEFV+FY++QPG+ LVFQL+ ICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI

Query:  FDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGIT-----SDEDEDE-EDLETNYSG
        FDT+ATEIDYP     VLI K+ENE  EESV+ +N  VLKKR REKEEK+ AYCS RE+KKM+RKNVK+   KHRG T     S EDEDE EDLETNYS 
Subjt:  FDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGIT-----SDEDEDE-EDLETNYSG

Query:  RQSNYRGS-------------------------------------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNY
        RQS YRGS                                      SPE+MRPMNPRKTP  LT NQL V RRA  FKCR NNPSFMVTMRPSYIQTGNY
Subjt:  RQSNYRGS-------------------------------------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNY

Query:  LSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE
        L         S+PR F ERYIKES+DVKLE+GDGRSWRV CGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFEL+NK   V F V IFRLP+PE
Subjt:  LSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE

XP_038902137.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Benincasa hispida]2.4e-14273.17Show/hide
Query:  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI
        MALFSSPNPHFFKIILHQ L Q+KL+LPNKFVKNNG SLL++KATL LPDGANW +QLK LD KICFLRGWPEFV+FY++QPG+ LVFQL+ ICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI

Query:  FDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGIT-----SDEDEDE-EDLETNYSG
        FDT+ATEIDYP     VLI K+ENE  EESV+ +N  VLKKR REKEEK+ AYCS RE+KKM+RKNVK+   KHRG T     S EDEDE EDLETNYS 
Subjt:  FDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGIT-----SDEDEDE-EDLETNYSG

Query:  RQSNYRGSV---------SPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVK
        RQS YRGS          SPE+MRPMNPRKTP  LT NQL V RRA  FKCR NNPSFMVTMRPSYIQTGNYL         S+PR F ERYIKES+DVK
Subjt:  RQSNYRGSV---------SPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVK

Query:  LEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE
        LE+GDGRSWRV CGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFEL+NK   V F V IFRLP+PE
Subjt:  LEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE

TrEMBL top hitse value%identityAlignment
A0A0A0LM04 Uncharacterized protein1.3e-13369.57Show/hide
Query:  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI
        M LF+SPNPHFFKI+LHQ LTQ+KL+LPNKFVKNN  SLL+N ATL LPDG+ W  QL +LD KICFLRGWPEFV FY VQPG+ LVFQLK ICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI

Query:  FDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRR--EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGIT-----SDEDEDEEDLETNYSG
        FDT+ATEIDYPM +LPV++ KSE++ E ES+QI++E VLKKRRR  +KE++++AY SLRE+KK ++  +    K R  T     SD+DED EDLET+YS 
Subjt:  FDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRR--EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGIT-----SDEDEDEEDLETNYSG

Query:  RQSNYR---------GSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVK
        RQ+NYR         G  SPESMRPMNPRKT Q LT NQL V RRAS FKCR  NPSFMVTMRPSYIQTGN L         SLPR F ERYIKESVDVK
Subjt:  RQSNYR---------GSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVK

Query:  LEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNP
        LEVGDGR W+VWCGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFELMNK   V F V IFRLP+P
Subjt:  LEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNP

A0A0A0LMR6 Uncharacterized protein8.3e-14977.07Show/hide
Query:  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD
        LF SPNPHFFK+ILHQTLTQ+KL+LPNKFVKNNG SLL+NK TL LPDGANWK+QLKKLD KICF RGWPEFVQFY+VQPGH LVFQLK ICCFNVLIFD
Subjt:  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD

Query:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKS-AAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNYSGRQSNYR-
        T+ATEIDYP+ +L  LI KS NE EEES+QI+NE+VLKKRR EKEE++  AY SLR +KKM+RKN K+   K+RGITSDEDE   DLE + S RQSN+R 
Subjt:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKS-AAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNYSGRQSNYR-

Query:  --------GSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGR
                G VSPESMRPMNPRKTP ALT NQLAVK+RASWFK RRNNPSFMVTMRPSYIQTGNYL         SLPR FGE+YIKESVDVKLEVGDGR
Subjt:  --------GSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGR

Query:  SWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE
         WRVWCGVRWAFTRRRTELKGGWKRF  DNELKEGDICVFELM KN  V FKVAIFRLP+ E
Subjt:  SWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE

A0A1S3C614 B3 domain-containing transcription factor VRN1-like5.6e-13769.89Show/hide
Query:  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI
        M  F SPNPHFFKIILHQ LTQ+KL+LPNKFVKNNGDSLL+N   L LPDGA W  QL KLD K CFLRGWPEFV+FY++QPG+ LVFQLK ICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI

Query:  FDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRR--EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGIT-----SDEDEDE---EDLETN
        FDT+ATEIDYPM + PVLI KSE+E EEES+ I++E  LKKR+R  +KE++++AYCSLR++KK +   +    KHR  T     SDEDEDE   EDLETN
Subjt:  FDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRR--EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGIT-----SDEDEDE---EDLETN

Query:  YSGRQSNYRGSV---------SPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESV
        YS RQ+NYRGS          SPESMRPMNPRK PQ LT NQL V RRAS FKCR  NPSFMVTMRPSYIQTGN L         SLPR F ERYIKES+
Subjt:  YSGRQSNYRGSV---------SPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESV

Query:  DVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE
        DVKLEVGDGR W+VWCGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFEL+NK   V F V IFRLPNP+
Subjt:  DVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPE

A0A1S3C6V0 B3 domain-containing transcription factor VRN1-like6.4e-14976.69Show/hide
Query:  KQKSLCLMA-LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKA
        K   + LMA LFSSPNPHFFK+ILHQTLTQ+KLELPNKFVKNNG S+L+NK TL LPDGANWK+QLKK D KI F RGWPEFVQFY+VQPG+ LVFQLK 
Subjt:  KQKSLCLMA-LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKA

Query:  ICCFNVLIFDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNY
        ICCFNVLIFDT+ATEIDYP+  L  +I KS NE EEES+QI+NE+VLKKRR EKEE++ AY SLR +KKM+RKN K+   K+RGITS  DEDEEDLET+ 
Subjt:  ICCFNVLIFDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNY

Query:  SGRQSNYRGS---------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVD
        S RQSN+RG+         VSPESMRPMNPRKTP ALT NQLAVK+RAS FK RRNNPSFMVTMRPSYIQTGNYL         SLPR FGERYIKESVD
Subjt:  SGRQSNYRGS---------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVD

Query:  VKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN
        VKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRF  DNELKEGDICVFELM KN  V FKVAIFRLPN
Subjt:  VKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN

A0A5A7TS22 B3 domain-containing transcription factor VRN1-like1.1e-14877.72Show/hide
Query:  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD
        LFSSPNPHFFK+ILHQTLTQ+KLELPNKFVKNNG S+L+NK TL LPDGANWK+QLKK D KI F RGWPEFVQFY+VQPG+ LVFQLK ICCFNVLIFD
Subjt:  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD

Query:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNYSGRQSNYRGS
        T+ATEIDYP+  L  +I KS NE EEES+QI+NE+VLKKRR EKEE++ AY SLR +KKM+RKN K+   K+RGITS  DEDEEDLET+ S RQSN+RG+
Subjt:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGITSDEDEDEEDLETNYSGRQSNYRGS

Query:  ---------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRS
                 VSPESMRPMNPRKTP ALT NQLAVK+RAS FK RRNNPSFMVTMRPSYIQTGNYL         SLPR FGERYIKESVDVKLEVGDGRS
Subjt:  ---------VSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRS

Query:  WRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN
        WRVWCGVRWAFTRRRTELKGGWKRF  DNELKEGDICVFELM KN  V FKVAIFRLPN
Subjt:  WRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN

SwissProt top hitse value%identityAlignment
Q7XS75 Putative B3 domain-containing protein Os04g03469004.3e-0920.4Show/hide
Query:  SSPNPHFFKIILHQTLTQRKLELPNKFVKN--NGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD
        +S  P F  ++L   +   K+ +P+KFV++   G++L  N A +  P G +W+++L K  + +    GW +F+ F+ +  G +++F+ +    F + +F 
Subjt:  SSPNPHFFKIILHQTLTQRKLELPNKFVKN--NGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFD

Query:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDEEDLETNYSGRQSNYRGSV
            + D+    + +     E +                                E     R+  K N K +    ++D +++++  +  G  S  +G  
Subjt:  TTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDEEDLETNYSGRQSNYRGSV

Query:  SPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNN---PSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGD-------GRS
        S    + M  RKT               SW K   N       ++++  ++ ++   + +  I +M               +D     GD        RS
Subjt:  SPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNN---PSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGD-------GRS

Query:  WRVWCGVRWAFTRRRTE-----LKGGWKRFVEDNELKEGDICVFELMN
        W V        T RR +     L  GW+RF EDN ++ GD+CVF +++
Subjt:  WRVWCGVRWAFTRRRTE-----LKGGWKRFVEDNELKEGDICVFELMN

Q84R27 B3 domain-containing protein At3g189603.2e-1228.8Show/hide
Query:  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTA
        SP   FFK++L  T+  + +++P +FVK  G S L    TL  P G    ++LK++  +I F  GW EF + ++++ GH L+F+ K    F V+IF+ +A
Subjt:  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTA

Query:  TEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRR-----EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDE
         E  YP+  + + I   ++  +    + V     +K  +     + E KS       E+ K++     MN  H  +  +E+ED+
Subjt:  TEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRR-----EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDE

Q8L3W1 B3 domain-containing transcription factor VRN11.7e-2628.07Show/hide
Query:  PNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTAT
        P P F K+I   T+ +++L +P+KFV    D L    A L +PDG  W++ L+K DNKI F  GW EFV  Y+++ G+LL+F+ +    F+V IF+ + +
Subjt:  PNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTAT

Query:  EIDYPMCQLPVLITKSEN---------EAEEESVQIV-------NELVLKKRRREKEEKSAAYCSL--------------REVKKMIRKNVKMNTKHRGI
        EI+Y       L+  + N         + E+E  +++       + L        K   S+A  +L              +  KK  RK    + +    
Subjt:  EIDYPMCQLPVLITKSEN---------EAEEESVQIV-------NELVLKKRRREKEEKSAAYCSL--------------REVKKMIRKNVKMNTKHRGI

Query:  TSDEDEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERY
        ++  D+D E+    Y    +  R   + E  R +N  KT +                     NP F V +RPSY+  G          +  LP GF E+Y
Subjt:  TSDEDEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERY

Query:  IKE-SVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRL
        +   S  +K+++ + + W V C     +   R +   GW  F  +N L EGD+CVFEL+     V  KV  FR+
Subjt:  IKE-SVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRL

Q9XIB4 B3 domain-containing protein At1g494754.6e-1127.12Show/hide
Query:  MKTNSKYPKQKSLCLMALFSSPNPH-----FFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTV
        M TN + P   +         P P      F KIIL   + ++ +++P +FV+      L +  TL  P G    +++K++ +++ F +GW EF + +++
Subjt:  MKTNSKYPKQKSLCLMALFSSPNPH-----FFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTV

Query:  QPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQL-----PVL------ITKSENEAEEESVQIVNELVLKKRRREK
          GH L F  +   CF V+IFD +A+EI+YP+         V+       T  E+  ++  V  ++EL+ KK+++ +
Subjt:  QPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQL-----PVL------ITKSENEAEEESVQIVNELVLKKRRREK

Q9ZSH7 B3 domain-containing protein At4g015807.5e-1433.1Show/hide
Query:  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTA
        SP   FFK++L  T+  + + +P +FVK  G S L    TL  P G    ++LK++  +I F  GW EF + ++++ GH L+F+ K    F V+IF+ +A
Subjt:  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTA

Query:  TEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKE
         E +YP+  + + I   ++  E    +   E   KKR R+ E
Subjt:  TEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKE

Arabidopsis top hitse value%identityAlignment
AT1G49475.1 AP2/B3-like transcriptional factor family protein3.3e-1227.12Show/hide
Query:  MKTNSKYPKQKSLCLMALFSSPNPH-----FFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTV
        M TN + P   +         P P      F KIIL   + ++ +++P +FV+      L +  TL  P G    +++K++ +++ F +GW EF + +++
Subjt:  MKTNSKYPKQKSLCLMALFSSPNPH-----FFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTV

Query:  QPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQL-----PVL------ITKSENEAEEESVQIVNELVLKKRRREK
          GH L F  +   CF V+IFD +A+EI+YP+         V+       T  E+  ++  V  ++EL+ KK+++ +
Subjt:  QPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQL-----PVL------ITKSENEAEEESVQIVNELVLKKRRREK

AT1G49480.1 related to vernalization1 15.2e-1027.09Show/hide
Query:  EKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMR
        ++S A  + + +KK  RK    N +    ++   +D E+    Y    +  R   + E  R +N  KT +                     NP F V +R
Subjt:  EKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMR

Query:  PSYIQTGNYLSDLRINVMQSLPRGFGERYIKE-SVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAI
        PSY+  G          +  LP GF E+Y+   S  +KL++G+ + W V C     +   R +   GW  F  +N + EGD+CVFEL+     V  +V  
Subjt:  PSYIQTGNYLSDLRINVMQSLPRGFGERYIKE-SVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAI

Query:  FRL
        FR+
Subjt:  FRL

AT3G18960.1 AP2/B3-like transcriptional factor family protein2.3e-1328.8Show/hide
Query:  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTA
        SP   FFK++L  T+  + +++P +FVK  G S L    TL  P G    ++LK++  +I F  GW EF + ++++ GH L+F+ K    F V+IF+ +A
Subjt:  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTA

Query:  TEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRR-----EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDE
         E  YP+  + + I   ++  +    + V     +K  +     + E KS       E+ K++     MN  H  +  +E+ED+
Subjt:  TEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRR-----EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDE

AT3G18990.1 AP2/B3-like transcriptional factor family protein1.2e-2728.07Show/hide
Query:  PNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTAT
        P P F K+I   T+ +++L +P+KFV    D L    A L +PDG  W++ L+K DNKI F  GW EFV  Y+++ G+LL+F+ +    F+V IF+ + +
Subjt:  PNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTAT

Query:  EIDYPMCQLPVLITKSEN---------EAEEESVQIV-------NELVLKKRRREKEEKSAAYCSL--------------REVKKMIRKNVKMNTKHRGI
        EI+Y       L+  + N         + E+E  +++       + L        K   S+A  +L              +  KK  RK    + +    
Subjt:  EIDYPMCQLPVLITKSEN---------EAEEESVQIV-------NELVLKKRRREKEEKSAAYCSL--------------REVKKMIRKNVKMNTKHRGI

Query:  TSDEDEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERY
        ++  D+D E+    Y    +  R   + E  R +N  KT +                     NP F V +RPSY+  G          +  LP GF E+Y
Subjt:  TSDEDEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERY

Query:  IKE-SVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRL
        +   S  +K+++ + + W V C     +   R +   GW  F  +N L EGD+CVFEL+     V  KV  FR+
Subjt:  IKE-SVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRL

AT4G01580.1 AP2/B3-like transcriptional factor family protein5.4e-1533.1Show/hide
Query:  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTA
        SP   FFK++L  T+  + + +P +FVK  G S L    TL  P G    ++LK++  +I F  GW EF + ++++ GH L+F+ K    F V+IF+ +A
Subjt:  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTA

Query:  TEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKE
         E +YP+  + + I   ++  E    +   E   KKR R+ E
Subjt:  TEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTAACTCAAAATATCCAAAACAAAAATCCCTCTGCTTAATGGCTCTGTTCAGTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCAAACTCTCACCCA
ACGAAAGCTCGAGCTTCCAAACAAATTCGTCAAGAACAATGGTGATTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGATGGCGCAAACTGGAAGCTCCAACTCA
AGAAATTGGACAACAAAATCTGTTTCCTCAGAGGTTGGCCGGAATTCGTCCAGTTTTATACTGTTCAACCTGGACATTTACTTGTGTTCCAATTGAAAGCAATTTGCTGC
TTCAATGTCCTCATTTTCGATACCACCGCCACCGAAATCGATTATCCAATGTGCCAGCTGCCGGTTCTGATTACGAAAAGTGAAAACGAAGCTGAAGAGGAGTCTGTTCA
GATAGTGAATGAGTTGGTTTTGAAGAAGAGAAGAAGAGAGAAAGAGGAAAAATCGGCGGCGTATTGTTCCTTACGAGAGGTGAAGAAGATGATAAGGAAGAATGTGAAGA
TGAATACGAAGCATCGAGGAATCACTAGCGATGAAGATGAGGATGAAGAAGATCTGGAAACGAATTACTCAGGGAGACAGAGTAATTACAGAGGATCAGTGAGTCCGGAA
TCGATGAGACCGATGAATCCACGGAAGACGCCGCAGGCATTGACGGCGAATCAATTGGCAGTTAAGAGAAGAGCGAGCTGGTTCAAATGCAGGAGGAACAATCCTTCATT
CATGGTGACGATGAGGCCTTCCTACATTCAAACAGGGAATTATCTGAGTGATTTGAGAATAAATGTGATGCAGAGCTTGCCGAGGGGATTTGGAGAGAGATACATAAAGG
AATCGGTGGATGTGAAGCTGGAGGTGGGAGACGGGAGGAGTTGGAGAGTGTGGTGCGGCGTCCGGTGGGCGTTCACGCGGCGGCGAACGGAGTTGAAAGGTGGTTGGAAG
AGATTCGTTGAGGATAATGAATTGAAGGAAGGCGATATTTGTGTGTTCGAATTGATGAACAAAAACGCCGTTGTTTGCTTCAAAGTCGCCATTTTCCGTCTTCCCAATCC
TGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACTAACTCAAAATATCCAAAACAAAAATCCCTCTGCTTAATGGCTCTGTTCAGTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCAAACTCTCACCCA
ACGAAAGCTCGAGCTTCCAAACAAATTCGTCAAGAACAATGGTGATTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGATGGCGCAAACTGGAAGCTCCAACTCA
AGAAATTGGACAACAAAATCTGTTTCCTCAGAGGTTGGCCGGAATTCGTCCAGTTTTATACTGTTCAACCTGGACATTTACTTGTGTTCCAATTGAAAGCAATTTGCTGC
TTCAATGTCCTCATTTTCGATACCACCGCCACCGAAATCGATTATCCAATGTGCCAGCTGCCGGTTCTGATTACGAAAAGTGAAAACGAAGCTGAAGAGGAGTCTGTTCA
GATAGTGAATGAGTTGGTTTTGAAGAAGAGAAGAAGAGAGAAAGAGGAAAAATCGGCGGCGTATTGTTCCTTACGAGAGGTGAAGAAGATGATAAGGAAGAATGTGAAGA
TGAATACGAAGCATCGAGGAATCACTAGCGATGAAGATGAGGATGAAGAAGATCTGGAAACGAATTACTCAGGGAGACAGAGTAATTACAGAGGATCAGTGAGTCCGGAA
TCGATGAGACCGATGAATCCACGGAAGACGCCGCAGGCATTGACGGCGAATCAATTGGCAGTTAAGAGAAGAGCGAGCTGGTTCAAATGCAGGAGGAACAATCCTTCATT
CATGGTGACGATGAGGCCTTCCTACATTCAAACAGGGAATTATCTGAGTGATTTGAGAATAAATGTGATGCAGAGCTTGCCGAGGGGATTTGGAGAGAGATACATAAAGG
AATCGGTGGATGTGAAGCTGGAGGTGGGAGACGGGAGGAGTTGGAGAGTGTGGTGCGGCGTCCGGTGGGCGTTCACGCGGCGGCGAACGGAGTTGAAAGGTGGTTGGAAG
AGATTCGTTGAGGATAATGAATTGAAGGAAGGCGATATTTGTGTGTTCGAATTGATGAACAAAAACGCCGTTGTTTGCTTCAAAGTCGCCATTTTCCGTCTTCCCAATCC
TGAAGAATAA
Protein sequenceShow/hide protein sequence
MKTNSKYPKQKSLCLMALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICC
FNVLIFDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDEEDLETNYSGRQSNYRGSVSPE
SMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWK
RFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPEE