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Lsi10G006060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranslation initiation factor 1
Genome locationchr10:8638723..8638923
RNA-Seq ExpressionLsi10G006060
SyntenyLsi10G006060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM88719.1 translational initiation factor 1, partial [Lagenaria siceraria]4.9e-0796.43Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
QCY72877.1 InfA [Cucumis hystrix]4.9e-0796.43Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
QSQ72345.1 translational initiation factor 1 [Benincasa hispida]4.9e-0796.43Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
YP_004841818.1 translational initiation factor 1 [Cucumis melo subsp. melo]1.4e-0692.86Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRI+HSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
YP_009326024.1 translation initiation factor 1 [Citrullus lanatus]4.9e-0796.43Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
TrEMBL top hitse value%identityAlignment
A0A1P8LDB8 Translation initiation factor 12.4e-0796.43Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
A0A1P8LEB1 Translation initiation factor 12.4e-0796.43Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
A0A343A8E5 Translation initiation factor 12.4e-0796.43Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
A0A4Y5RD46 InfA2.4e-0796.43Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
X2F7S7 Translational initiation factor 1 (Fragment)2.4e-0796.43Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCLDNEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
SwissProt top hitse value%identityAlignment
A1XFZ0 Translation initiation factor IF-1, chloroplastic2.1e-0578.57Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWV LDNED +LGYV GRIR SFI IL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
A5J1W9 Translation initiation factor IF-1, chloroplastic1.9e-0992.86Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWVCL+NEDPILGYV GRIRHSFIHIL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
P08698 Translation initiation factor IF-1, chloroplastic9.5e-0682.14Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWV LDNEDPILGYV GRIR S I IL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
Q6EW17 Translation initiation factor IF-1, chloroplastic2.1e-0578.57Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWV LDNED +LGYV GRIR SFI IL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
Q95GN8 Translation initiation factor IF-1, chloroplastic2.1e-0578.57Show/hide
Query:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
        MFWV LDNED +LGYV GRIR SFI IL
Subjt:  MFWVCLDNEDPILGYVLGRIRHSFIHIL
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGGGTTTGTTTAGATAATGAGGATCCAATTCTAGGTTACGTTTTAGGAAGGATTCGACATAGTTTTATCCATATACTAGAGAGTCAAAATTTCAGTAAGTTGTT
ACGATTCAACCAGAACCAAAGGACGTACTACGAAACAAAGATTCGAATGATTAGG
mRNA sequenceShow/hide mRNA sequence
GTTTAATTACTGAATCACTTACCAATGGTATGTTTTGGGTTTGTTTAGATAATGAGGATCCAATTCTAGGTTACGTTTTAGGAAGGATTCGACATAGTTTTATCCATATA
CTAGAGAGTCAAAATTTCAGTAAGTTGTTACGATTCAACCAGAACCAAAGGACGTACTACGAAACAAAGATTCGAATGATTAGG
Protein sequenceShow/hide protein sequence
MFWVCLDNEDPILGYVLGRIRHSFIHILESQNFSKLLRFNQNQRTYYETKIRMIR