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Lsi10G006080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPhotosystem I subunit IX
Genome locationchr10:8640774..8642170
RNA-Seq ExpressionLsi10G006080
SyntenyLsi10G006080
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009512 - cytochrome b6f complex (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4348564.1 hypothetical protein F8388_000243 [Cannabis sativa]9.2e-1172.55Show/hide
Query:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        RR+LNARSKNIS RGTGSKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

KAF4396249.1 hypothetical protein F8388_019795 [Cannabis sativa]4.6e-1070.59Show/hide
Query:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        RR+LNARSKNIS RGT SKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

KAF4396261.1 hypothetical protein F8388_019807 [Cannabis sativa]1.2e-1067.8Show/hide
Query:  EFRRQY-KRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        EF +Q   RR+LNARSKNIS RGTGSKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  EFRRQY-KRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

KAF4400826.1 hypothetical protein G4B88_004369 [Cannabis sativa]2.7e-1072.55Show/hide
Query:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        RR+LNARSKNISL GTGSKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

KAF4400829.1 hypothetical protein G4B88_004372 [Cannabis sativa]6.0e-1066.1Show/hide
Query:  EFRRQY-KRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        EF +Q   RR+LNARSKNIS RG GSKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  EFRRQY-KRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

TrEMBL top hitse value%identityAlignment
A0A7J6DR38 Uncharacterized protein4.5e-1172.55Show/hide
Query:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        RR+LNARSKNIS RGTGSKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

A0A7J6HMT8 Uncharacterized protein5.8e-1167.8Show/hide
Query:  EFRRQY-KRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        EF +Q   RR+LNARSKNIS RGTGSKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  EFRRQY-KRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

A0A7J6HNG0 Uncharacterized protein2.2e-1070.59Show/hide
Query:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        RR+LNARSKNIS RGT SKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

A0A7J6I087 Uncharacterized protein1.3e-1072.55Show/hide
Query:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        RR+LNARSKNISL GTGSKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  RRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

A0A7J6I153 Uncharacterized protein2.9e-1066.1Show/hide
Query:  EFRRQY-KRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV
        EF +Q   RR+LNARSKNIS RG GSKYYMV  FS  I+RDQSFI GCV IP+F +I++
Subjt:  EFRRQY-KRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCGAATTCCGCAGACAATACAAGCGGAGGGTTTTAAATGCGAGATCTAAAAACATATCTCTCCGTGGCACCGGTAGTAAGTACTATATGGTTCGGGGCTTTAG
CGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTGCATCATTCTAGTTATTGACTTGGGAAGGGGTGAAGAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCGAATTCCGCAGACAATACAAGCGGAGGGTTTTAAATGCGAGATCTAAAAACATATCTCTCCGTGGCACCGGTAGTAAGTACTATATGGTTCGGGGCTTTAG
CGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTGCATCATTCTAGTTATTGACTTGGGAAGGGGTGAAGAAAATTAG
Protein sequenceShow/hide protein sequence
MESEFRRQYKRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILVIDLGRGEEN