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Lsi10G006110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:8647202..8649743
RNA-Seq ExpressionLsi10G006110
SyntenyLsi10G006110
Gene Ontology termsGO:0033169 - histone H3-K9 demethylation (biological process)
GO:0032454 - histone demethylase activity (H3-K9 specific) (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4277259.1 unnamed protein product [Prunus armeniaca]1.5e-2690.28Show/hide
Query:  LGALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID
        LGALTIQPWM +DSASELGFGIPS+ASISSVKGDS KD IGRRVS+TNKIRVEKG+LAKLDKIGMGIGTCID
Subjt:  LGALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID

GFP78793.1 hypothetical protein PHJA_000022800 [Phtheirospermum japonicum]7.8e-2376.83Show/hide
Query:  GALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID--EQESVYSRS
        GALTIQPWMQRDSASELGFGIPS+A ISS KGDS KD IGRRVS+ NKI V+KG+LAKLDKIGMG  TCID  +Q  +YS S
Subjt:  GALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID--EQESVYSRS

KAF3643672.1 hypothetical protein FXO37_21863 [Capsicum annuum]4.6e-2387.88Show/hide
Query:  QPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID
        QPWMQ+D ASE+GFGIPS+ASISSVKGDS KD IGRRVS+TNKIRVEKG+LAKLDKIGMGIGTCID
Subjt:  QPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID

PHT75611.1 hypothetical protein T459_19133 [Capsicum annuum]1.1e-2487.14Show/hide
Query:  ALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID
        +LTIQPWMQ+D ASE+GFGIPS+ASISSVKGDS KD IGRRVS+TNKIRVEKG+LAKLDKIGMGIGTCID
Subjt:  ALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID

XP_042528808.1 LOW QUALITY PROTEIN: ribosomal protein S3, mitochondrial-like [Dipodomys spectabilis]5.4e-2481.58Show/hide
Query:  SFFWLGALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID
        +F  LGA TIQPW Q++SASELGFGIPS+ASISSVKGDS KD I RRVS+TNKI VEKG+LAKLDKIGMGIGTCID
Subjt:  SFFWLGALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID

TrEMBL top hitse value%identityAlignment
A0A2G2Z134 Uncharacterized protein5.3e-2587.14Show/hide
Query:  ALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID
        +LTIQPWMQ+D ASE+GFGIPS+ASISSVKGDS KD IGRRVS+TNKIRVEKG+LAKLDKIGMGIGTCID
Subjt:  ALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID

A0A6J5UL73 Uncharacterized protein7.4e-2790.28Show/hide
Query:  LGALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID
        LGALTIQPWM +DSASELGFGIPS+ASISSVKGDS KD IGRRVS+TNKIRVEKG+LAKLDKIGMGIGTCID
Subjt:  LGALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTCAGAGCTCTCGCGCTGCTTGCTATCTAAAGAATGAAGAAACCGCTACTGAACAAGAGCGAGTGAAGTGCAGATTTGGCGTCGGCCTAGGATTCTTTATACG
TTGGATTTGGTACGAGAGCCTATGCTTTAAGAACAGGCTTAGGCCCTATAGCTTAAGGTGGATCGAATCCTACATACTTGTCACACAGACAGACGCAAAATTGGAAAACA
AATCATCAACTTCAACTGCTACATGCCCCGGATCGCGGGGGGAAACAGGAGCTTTTGGTTTGGATGCTTCGGTGGGTTCGGATGAAACAGAAAAATCTTACTACTTAGTG
GATGATTCGGCATCCTCAGGCTTTAACCTTCCCCTTAGGACCAAGCAAGGGCTGACATTAGCGAATGCTCATAACGTCCTTGCTTTCTCGATATCAGTAATTAAGGATCT
CTCCTTCTTCTGGTTGGGCGCTTTAACCATTCAGCCATGGATGCAAAGAGACTCAGCGAGTGAACTAGGTTTTGGTATTCCTTCTCAAGCTTCTATTTCTTCCGTTAAAG
GAGATTCAGAAAAAGATGAAATAGGAAGACGTGTTTCCAAAACGAACAAGATACGGGTTGAGAAGGGGAAGTTAGCAAAGTTAGACAAGATTGGAATGGGCATAGGAACA
TGTATTGATGAACAAGAAAGTGTTTATAGCCGTAGCGATATAAACAAGAATACTCATCCGAGCCGCAGGAACATGTACATACAGAATACGAGAATTTCCACCTTGTTGAA
GATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTTCAGAGCTCTCGCGCTGCTTGCTATCTAAAGAATGAAGAAACCGCTACTGAACAAGAGCGAGTGAAGTGCAGATTTGGCGTCGGCCTAGGATTCTTTATACG
TTGGATTTGGTACGAGAGCCTATGCTTTAAGAACAGGCTTAGGCCCTATAGCTTAAGGTGGATCGAATCCTACATACTTGTCACACAGACAGACGCAAAATTGGAAAACA
AATCATCAACTTCAACTGCTACATGCCCCGGATCGCGGGGGGAAACAGGAGCTTTTGGTTTGGATGCTTCGGTGGGTTCGGATGAAACAGAAAAATCTTACTACTTAGTG
GATGATTCGGCATCCTCAGGCTTTAACCTTCCCCTTAGGACCAAGCAAGGGCTGACATTAGCGAATGCTCATAACGTCCTTGCTTTCTCGATATCAGTAATTAAGGATCT
CTCCTTCTTCTGGTTGGGCGCTTTAACCATTCAGCCATGGATGCAAAGAGACTCAGCGAGTGAACTAGGTTTTGGTATTCCTTCTCAAGCTTCTATTTCTTCCGTTAAAG
GAGATTCAGAAAAAGATGAAATAGGAAGACGTGTTTCCAAAACGAACAAGATACGGGTTGAGAAGGGGAAGTTAGCAAAGTTAGACAAGATTGGAATGGGCATAGGAACA
TGTATTGATGAACAAGAAAGTGTTTATAGCCGTAGCGATATAAACAAGAATACTCATCCGAGCCGCAGGAACATGTACATACAGAATACGAGAATTTCCACCTTGTTGAA
GATCTAG
Protein sequenceShow/hide protein sequence
MKVQSSRAACYLKNEETATEQERVKCRFGVGLGFFIRWIWYESLCFKNRLRPYSLRWIESYILVTQTDAKLENKSSTSTATCPGSRGETGAFGLDASVGSDETEKSYYLV
DDSASSGFNLPLRTKQGLTLANAHNVLAFSISVIKDLSFFWLGALTIQPWMQRDSASELGFGIPSQASISSVKGDSEKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGT
CIDEQESVYSRSDINKNTHPSRRNMYIQNTRISTLLKI