; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G006130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal protein S4
Genome locationchr10:8652959..8654829
RNA-Seq ExpressionLsi10G006130
SyntenyLsi10G006130
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002942 - RNA-binding S4 domain
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALJ78540.1 ribosomal protein S4, partial [Malus hupehensis var. mengshanensis]6.0e-11968.19Show/hide
Query:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR
        ++PALRFKTCRLL GN                           IYPR+NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETR DVI VR
Subjt:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR

Query:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHF ETIPQARQ ISH RVCVN GMV ITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTK EWFHLLKT RGCRLLLK
Subjt:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-
        S                                                    RRN+KN+NLPTRTRSPIV NSSLY NSTYCSASPHQFTMKR+IKRI 
Subjt:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-

Query:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
           +Y  +  RTLKAVVSYGP+I HIPHDIRLKD NLPLRS NGRGQNI
Subjt:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

KAF3954221.1 hypothetical protein CMV_020407 [Castanea mollissima]1.2e-11968.48Show/hide
Query:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR
        +LPALRFKTCRLL GN                           IYPRENLNSYIQSQTTRKLPLFHG+LPITEMHRGTERTSYIPFPLNPETRLDVILVR
Subjt:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR

Query:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHF ETIPQARQ ISH R+CVN GMV ITH KVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-
        S                                                    RRNEKN+N+PTRTRS IV NSSLYSNSTYCSA PHQFTMKR+IKRI 
Subjt:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-

Query:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
           +Y  +  RT KAVVSYGP+I HIPHDIRLKD NLPLRS NGRGQNI
Subjt:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

QDS78275.1 ribosomal protein S4 [Camellia sinensis var. assamica]2.7e-11968.39Show/hide
Query:  LPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVRL
        +PALRFKTCRLL GN                           IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETR DVI VRL
Subjt:  LPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVRL

Query:  HFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS
        HF ETIPQARQ ISH RVCVN G+V ITHFKVSHGD+ISFQENDAR RGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWF LLKTKRGCRLLLKS
Subjt:  HFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS

Query:  ----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI--
                                                            RRNEKN+N+PTRT SPIV NSSLYSNSTYCSASPHQFTMKRKIKRI  
Subjt:  ----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI--

Query:  --NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
          +Y  +  RT KAVVSYGP+I HIPHDIRLKDPNLPLRS NGRGQNI
Subjt:  --NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

WP_131747055.1 hypothetical protein [Candidatus Frankia meridionalis]2.4e-12370.2Show/hide
Query:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR
        ++ ALRFKTCRLLLGN                           IYPR NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETR DVI VR
Subjt:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR

Query:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHF ETIPQARQ ISH RVCVNKGMV ITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-
        S                                                    RRNEKN+NLPTRTRSPIV NSSLYSNSTYCSASPHQFTMKRKIKRI 
Subjt:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-

Query:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
           +Y  +  RTLKAVVSYGP+I HIPHDIRLKDPNLPLRS NGRGQNI
Subjt:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

YP_009913620.1 ribosomal protein S4 [Luffa acutangula]8.1e-12470.49Show/hide
Query:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR
        +LPALRF+TCRLLLGN                           IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETR DVI VR
Subjt:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR

Query:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHFSETIPQARQ ISH RVCVNKGMV ITHFKVSHGD ISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-
        S                                                    RRNEKN+NLPTRTRSPIV NSSLYSNSTYCSASPHQFTMK KIKRI 
Subjt:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-

Query:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
           +Y  +  RTLKAVVSYGP+I HIPHDIRLKDPNLPLRS NGRGQNI
Subjt:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

TrEMBL top hitse value%identityAlignment
A0A0U2N8V3 Ribosomal protein S4 (Fragment)2.9e-11968.19Show/hide
Query:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR
        ++PALRFKTCRLL GN                           IYPR+NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETR DVI VR
Subjt:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR

Query:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHF ETIPQARQ ISH RVCVN GMV ITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTK EWFHLLKT RGCRLLLK
Subjt:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-
        S                                                    RRN+KN+NLPTRTRSPIV NSSLY NSTYCSASPHQFTMKR+IKRI 
Subjt:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-

Query:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
           +Y  +  RTLKAVVSYGP+I HIPHDIRLKD NLPLRS NGRGQNI
Subjt:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

A0A2R4LW55 Ribosomal protein S41.9e-11867.53Show/hide
Query:  LPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVRL
        + ALRFKTCRLL GN                           IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTE+TSYIPF LNPETRLDVILVRL
Subjt:  LPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVRL

Query:  HFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS
        HF ETIPQARQ ISH RVCVN G+V ITH ++SHGD+ISFQEND RIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS
Subjt:  HFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS

Query:  ----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI--
                                                            RRNEKN+N PTRTRSPIV NSSLYSNSTYCSASPHQFTMKR+IKRI  
Subjt:  ----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI--

Query:  --NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
          +Y  +  RT KAVVSYGP+I HIPHDIRLKDPNLPLRS NGRGQNI
Subjt:  --NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

A0A517LRL3 Ribosomal protein S41.3e-11968.39Show/hide
Query:  LPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVRL
        +PALRFKTCRLL GN                           IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETR DVI VRL
Subjt:  LPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVRL

Query:  HFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS
        HF ETIPQARQ ISH RVCVN G+V ITHFKVSHGD+ISFQENDAR RGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWF LLKTKRGCRLLLKS
Subjt:  HFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS

Query:  ----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI--
                                                            RRNEKN+N+PTRT SPIV NSSLYSNSTYCSASPHQFTMKRKIKRI  
Subjt:  ----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI--

Query:  --NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
          +Y  +  RT KAVVSYGP+I HIPHDIRLKDPNLPLRS NGRGQNI
Subjt:  --NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

A0A7D6BZG8 Ribosomal protein S43.9e-12470.49Show/hide
Query:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR
        +LPALRF+TCRLLLGN                           IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETR DVI VR
Subjt:  SLPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR

Query:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHFSETIPQARQ ISH RVCVNKGMV ITHFKVSHGD ISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-
        S                                                    RRNEKN+NLPTRTRSPIV NSSLYSNSTYCSASPHQFTMK KIKRI 
Subjt:  S----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI-

Query:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
           +Y  +  RTLKAVVSYGP+I HIPHDIRLKDPNLPLRS NGRGQNI
Subjt:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

A0A7U0FVB6 Ribosomal protein S41.9e-11867.53Show/hide
Query:  LPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVRL
        + ALRFKTCRLL GN                           IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTE+TSYIPF LNPETRLDVILVRL
Subjt:  LPALRFKTCRLLLGN---------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVRL

Query:  HFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS
        HF ETIPQARQ ISH RVCVN G+V ITH ++SHGD+ISFQEND RIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS
Subjt:  HFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS

Query:  ----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI--
                                                            RRNEKN+N PTRTRSPIV NSSLYSNSTYCSASPHQFTMKR+IKRI  
Subjt:  ----------------------------------------------------RRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI--

Query:  --NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
          +Y  +  RT KAVVSYGP+I HIPHDIRLKDPNLPLRS NGRGQNI
Subjt:  --NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

SwissProt top hitse value%identityAlignment
B6J5F6 30S ribosomal protein S47.1e-0634.78Show/hide
Query:  ETRLDVILVRLHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLI---SFQENDARIRG-----EEIRRSFYIEISVEKIIGKFLDHP
        E+RLD ++ R+ FS T  +ARQ ISH  + VN  +V I  ++V  GD+I   S  +   RI+G     ++     +IE+  +K+ G F + P
Subjt:  ETRLDVILVRLHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLI---SFQENDARIRG-----EEIRRSFYIEISVEKIIGKFLDHP

P26866 Ribosomal protein S4, mitochondrial6.6e-2042.76Show/hide
Query:  ALRFKTCRLLLGNIYPRENL---------------------NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYI----PFPLNPETRLDVILVRLHFSE
        A RFK CR +L N++  + L                     +  IQ QT +KL LF+G+LPI +M R    T YI        N E RLDVILVRL+F  
Subjt:  ALRFKTCRLLLGNIYPRENL---------------------NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYI----PFPLNPETRLDVILVRLHFSE

Query:  TIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSF
        T+ QARQ ISH  +CVN   V I  F+VS+GDLIS QEN        IR++F
Subjt:  TIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSF

P46743 Ribosomal protein S4, mitochondrial9.9e-0825.11Show/hide
Query:  RKLPLFHGDLPITEMHRGTERTSYIP--FPLN----PETRLDVILVRLHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEI
        +KL +F+G +P+ ++H+   +   +P  F  N     E RLDV+L R  F++TI  ARQ+  H ++ VN  + RI    +  GD+IS++     ++  EI
Subjt:  RKLPLFHGDLPITEMHRGTERTSYIP--FPLN----PETRLDVILVRLHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEI

Query:  RRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRRNEKNQNLPTRTRSPIVDNSSLYSN-STYCSASPHQFTMKRKIKRINYLLI
        + + +  I+   + G  + + V      K     L   K+   LLL   ++  N++     +     N   + N     SA  +   ++ K  R  Y LI
Subjt:  RRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRRNEKNQNLPTRTRSPIVDNSSLYSN-STYCSASPHQFTMKRKIKRINYLLI

Query:  IRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRN
                +S+      I + +  K  NLP+  +N
Subjt:  IRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRN

Q31708 Ribosomal protein S4, mitochondrial7.7e-10160.46Show/hide
Query:  LPALRFKTCRLLLGN----------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR
        L  LRF+TCRLL GN                            IYP++ L SYIQ QTTRKLP F+GDLPITEMHRGT+RTSYIPF LN ETR DVI +R
Subjt:  LPALRFKTCRLLLGN----------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR

Query:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        L+F ETIPQARQ ISH RVCVNKGMV ITHFK+SHGD+ISFQEN+A IRGEEIRRSFY EI VEKIIGK L  P+RMWRR+KTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  S--------------------------------------------------RRNEKNQNLPTRTRSPIVDNS--SLYSNSTYCSASPHQFTMKRKIKRI-
        S                                                  RR +KN NLPTRT SPIV NS  SLYSNSTYC ASPH+ TMKR+IKRI 
Subjt:  S--------------------------------------------------RRNEKNQNLPTRTRSPIVDNS--SLYSNSTYCSASPHQFTMKRKIKRI-

Query:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
           +YL +  RT KAVV YGP+I HIPHDIRLKD NL L SRNGRGQNI
Subjt:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

Q9PE53 30S ribosomal protein S47.1e-0631.58Show/hide
Query:  ETRLDVILVRLHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDAR---------IRGEEIRRSFYIEISVEKIIGKFLDHPVR
        ETRLD ++ R+ F+ T P ARQ +SH RV VN  +V +  + V  GD+++  +   +         I+ +      ++E+  EK  G F   P R
Subjt:  ETRLDVILVRLHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDAR---------IRGEEIRRSFYIEISVEKIIGKFLDHPVR

Arabidopsis top hitse value%identityAlignment
AT2G07734.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein1.9e-11063.04Show/hide
Query:  LPALRFKTCRLLLGN----------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR
        L  LRF+TCRLL GN                            IYP++ L SYIQ QTTRKLPLFHGDLPITEMHRGT+RTSYIPFPLNPETR DVI +R
Subjt:  LPALRFKTCRLLLGN----------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR

Query:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHF ETIPQARQ ISH RVCVNKGMV ITHFK+SHGD+ISFQEN+A IRGEEIRRSFY EISVEKIIGK L  P+RMWRR+KTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  S--------------------------------------------------RRNEKNQNLPTRTRSPIVDNS--SLYSNSTYCSASPHQFTMKRKIKRI-
        S                                                  RR +KN NLPTRT SPIV NS  SLYSNSTYC ASPH+ TMKR+IKRI 
Subjt:  S--------------------------------------------------RRNEKNQNLPTRTRSPIVDNS--SLYSNSTYCSASPHQFTMKRKIKRI-

Query:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
           +Y  +  RT KAVVSYGP+I HIPHDIRLKDPNLPLRSRNGRGQNI
Subjt:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI

ATMG00290.1 mitochondrial ribosomal protein S41.9e-11063.04Show/hide
Query:  LPALRFKTCRLLLGN----------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR
        L  LRF+TCRLL GN                            IYP++ L SYIQ QTTRKLPLFHGDLPITEMHRGT+RTSYIPFPLNPETR DVI +R
Subjt:  LPALRFKTCRLLLGN----------------------------IYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVR

Query:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHF ETIPQARQ ISH RVCVNKGMV ITHFK+SHGD+ISFQEN+A IRGEEIRRSFY EISVEKIIGK L  P+RMWRR+KTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  S--------------------------------------------------RRNEKNQNLPTRTRSPIVDNS--SLYSNSTYCSASPHQFTMKRKIKRI-
        S                                                  RR +KN NLPTRT SPIV NS  SLYSNSTYC ASPH+ TMKR+IKRI 
Subjt:  S--------------------------------------------------RRNEKNQNLPTRTRSPIVDNS--SLYSNSTYCSASPHQFTMKRKIKRI-

Query:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI
           +Y  +  RT KAVVSYGP+I HIPHDIRLKDPNLPLRSRNGRGQNI
Subjt:  ---NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCTTGCCTGCATTAAGATTTAAAACTTGTCGTCTACTTTTAGGAAATATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCT
TTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATTGGACGTTATTTTGGTTCGTC
TCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGTCGATAAGTCATCTAAGGGTTTGTGTGAATAAAGGAATGGTCCGCATTACTCATTTTAAAGTTTCCCACGGTGAT
CTAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCC
GGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGAAGGAACGAGAAAAACCAAAATCTTC
CTACTCGAACAAGAAGTCCTATAGTTGACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGAAAAATCAAAAGGATC
AACTACCTACTCATTATTCGGAGAACACTAAAAGCTGTGGTATCTTATGGACCTAGCATAGCTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCG
GAGCAGAAACGGACGTGGCCAAAACATC
mRNA sequenceShow/hide mRNA sequence
TCCTTGCCTGCATTAAGATTTAAAACTTGTCGTCTACTTTTAGGAAATATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCT
TTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATTGGACGTTATTTTGGTTCGTC
TCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGTCGATAAGTCATCTAAGGGTTTGTGTGAATAAAGGAATGGTCCGCATTACTCATTTTAAAGTTTCCCACGGTGAT
CTAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCC
GGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGAAGGAACGAGAAAAACCAAAATCTTC
CTACTCGAACAAGAAGTCCTATAGTTGACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGAAAAATCAAAAGGATC
AACTACCTACTCATTATTCGGAGAACACTAAAAGCTGTGGTATCTTATGGACCTAGCATAGCTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCG
GAGCAGAAACGGACGTGGCCAAAACATC
Protein sequenceShow/hide protein sequence
SLPALRFKTCRLLLGNIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRLDVILVRLHFSETIPQARQSISHLRVCVNKGMVRITHFKVSHGD
LISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRRNEKNQNLPTRTRSPIVDNSSLYSNSTYCSASPHQFTMKRKIKRI
NYLLIIRRTLKAVVSYGPSIAHIPHDIRLKDPNLPLRSRNGRGQNI