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Lsi10G006150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:8687796..8688779
RNA-Seq ExpressionLsi10G006150
SyntenyLsi10G006150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5511288.1 hypothetical protein DKX38_030083 [Salix brachista]1.0e-0851.11Show/hide
Query:  YHPSRIFNPHVPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRR--------GDGSLSTICISNLKLAQYSGCPSPVSRTRAVF
        + P R     VPIRGLQPAF PMHRELDQDQ LLKL DLALE TIEK            D  L       LKLA + G P     + AVF
Subjt:  YHPSRIFNPHVPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRR--------GDGSLSTICISNLKLAQYSGCPSPVSRTRAVF
KAF9660720.1 hypothetical protein SADUNF_SadunfMtG0001700 [Salix dunnii]2.9e-0855Show/hide
Query:  VPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRR--------GDGSLSTICISNLKLAQYSGCPSPVSRTRAVF
        VPIRGLQPAF PMHRELDQDQ LLKL DLALE TIEK            D  L       LKLA + G P     + AVF
Subjt:  VPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRR--------GDGSLSTICISNLKLAQYSGCPSPVSRTRAVF
TrEMBL top hitse value%identityAlignment
A0A5N5IVC8 Uncharacterized protein4.9e-0951.11Show/hide
Query:  YHPSRIFNPHVPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRR--------GDGSLSTICISNLKLAQYSGCPSPVSRTRAVF
        + P R     VPIRGLQPAF PMHRELDQDQ LLKL DLALE TIEK            D  L       LKLA + G P     + AVF
Subjt:  YHPSRIFNPHVPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRR--------GDGSLSTICISNLKLAQYSGCPSPVSRTRAVF
A0A6N2KC74 Uncharacterized protein7.5e-1056.96Show/hide
Query:  VPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRRG-------DGSLSTICISNLKLAQYSGCPSPVSRTRAVF
        VPIRGLQPAF PMHRELDQDQ LLKL DLALE TIE+R  G       D  L       LKLA + G P     + AVF
Subjt:  VPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRRG-------DGSLSTICISNLKLAQYSGCPSPVSRTRAVF
A0A6N2KV21 Uncharacterized protein1.4e-0855Show/hide
Query:  VPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRR--------GDGSLSTICISNLKLAQYSGCPSPVSRTRAVF
        VPIRGLQPAF PMHRELDQDQ LLKL DLALE TIEK            D  L       LKLA + G P     + AVF
Subjt:  VPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRR--------GDGSLSTICISNLKLAQYSGCPSPVSRTRAVF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATAAGATTTCAATATCATCCTTCGAGAATCTTTAATCCTCATGTTCCCATTCGGGGGCTTCAACCAGCATTTCACCCCATGCATCGTGAATTGGATCAAGATCA
ACAGCTTCTTAAGCTTTTGGATTTGGCTCTCGAATTTACTATTGAAAAGAGGAGGCGAGGTGATGGCTCTCTTTCGACAATATGCATCTCGAACCTGAAATTGGCCCAGT
ACTCGGGGTGCCCCTCCCCGGTCTCAAGAACTCGAGCGGTCTTTATAGTGGTAGTCGATTCGGATTGTATAGCTGCTGGGAAGCATAAAGATCGATCAATGTCCAGATTG
CAACGCATTAAGATGTCAATGCCCAGTAGTGAATGTGTTCCCGGTGGGTCTATCTTTGGTTGGGCTGGGGCGGAAGATTTTGATAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATAAGATTTCAATATCATCCTTCGAGAATCTTTAATCCTCATGTTCCCATTCGGGGGCTTCAACCAGCATTTCACCCCATGCATCGTGAATTGGATCAAGATCA
ACAGCTTCTTAAGCTTTTGGATTTGGCTCTCGAATTTACTATTGAAAAGAGGAGGCGAGGTGATGGCTCTCTTTCGACAATATGCATCTCGAACCTGAAATTGGCCCAGT
ACTCGGGGTGCCCCTCCCCGGTCTCAAGAACTCGAGCGGTCTTTATAGTGGTAGTCGATTCGGATTGTATAGCTGCTGGGAAGCATAAAGATCGATCAATGTCCAGATTG
CAACGCATTAAGATGTCAATGCCCAGTAGTGAATGTGTTCCCGGTGGGTCTATCTTTGGTTGGGCTGGGGCGGAAGATTTTGATAAATAA
Protein sequenceShow/hide protein sequence
MAIRFQYHPSRIFNPHVPIRGLQPAFHPMHRELDQDQQLLKLLDLALEFTIEKRRRGDGSLSTICISNLKLAQYSGCPSPVSRTRAVFIVVVDSDCIAAGKHKDRSMSRL
QRIKMSMPSSECVPGGSIFGWAGAEDFDK