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Lsi10G006180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006180
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionOrf122b protein
Genome locationchr10:8692994..8693900
RNA-Seq ExpressionLsi10G006180
SyntenyLsi10G006180
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI14783.3 unnamed protein product, partial [Vitis vinifera]8.2e-4788.79Show/hide
Query:  ARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPG
        AR L PYC RDASRAGLLEMRPFGEAKSI GHQTLQLMRRPYGVKGS+Y+VTL AFQRCLEDGPDAAERRPGSGFPTGRGT DGHL+A HDLQA PARPG
Subjt:  ARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPG

Query:  KATRLGL
        KATRLG+
Subjt:  KATRLGL

KAF3670880.1 putative HTH-type transcriptional regulator TrpI-like [Capsicum annuum]4.1e-4689.52Show/hide
Query:  RGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPGK
        RGLEPYC RDASRAGLLE+R FGEAKSILGHQTLQLMRRPYGVKGS+Y+V L AFQRCLEDGPDAAERR GSGFPTGRGT+DG+LKA HDLQATPARPGK
Subjt:  RGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPGK

Query:  ATRLG
        ATRLG
Subjt:  ATRLG

KAG6384133.1 hypothetical protein SASPL_156067 [Salvia splendens]7.2e-5184.92Show/hide
Query:  MMIGLGRAADLLRTP-VGISARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRG
        MMIGLGRAA LLR P V  + RGLEPYCGRDASRAGLLEMRPFG+AKSI GHQTLQLM+RPY   GS+Y+VTL AFQRCLEDGPDAAERRPGSGFP GRG
Subjt:  MMIGLGRAADLLRTP-VGISARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRG

Query:  TEDGHLKAQHDLQATPARPGKATRLG
        T DGHLKA HDLQATPARPGKATRLG
Subjt:  TEDGHLKAQHDLQATPARPGKATRLG

YP_002608410.1 orf145 [Vitis vinifera]8.2e-4788.79Show/hide
Query:  ARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPG
        AR L PYC RDASRAGLLEMRPFGEAKSI GHQTLQLMRRPYGVKGS+Y+VTL AFQRCLEDGPDAAERRPGSGFPTGRGT DGHL+A HDLQA PARPG
Subjt:  ARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPG

Query:  KATRLGL
        KATRLG+
Subjt:  KATRLGL

YP_009711317.1 hypothetical protein [Rhaphiolepis bibas]3.8e-5257.08Show/hide
Query:  LQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPGKATRLG----------------------------
        +QLMRRPYGVKGS+Y+VTL A QRCL+DGPDAAERRPGS FP+G GT DGHL+A HDLQATPARPG+ATRLG                            
Subjt:  LQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPGKATRLG----------------------------

Query:  ----------------------------------LYRQQQRRFDRGLPFHYFFHDEGTASASASVEVVERPPESKRELPHLSPRDTIQYQNRLKESEEAA
                                          LYRQQQ RFD GL FHYFFHDEGT  A ASV+ VERPPESK EL HLSPR+TI+Y NRLKESE AA
Subjt:  ----------------------------------LYRQQQRRFDRGLPFHYFFHDEGTASASASVEVVERPPESKRELPHLSPRDTIQYQNRLKESEEAA

Query:  TLLAQPTGKPLLSGLHQVH
        TL A   G PLLSGLHQVH
Subjt:  TLLAQPTGKPLLSGLHQVH

TrEMBL top hitse value%identityAlignment
A0A2G2YKS4 Uncharacterized protein2.0e-4689.52Show/hide
Query:  RGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPGK
        RGLEPYC RDASRAGLLE+R FGEAKSILGHQTLQLMRRPYGVKGS+Y+V L AFQRCLEDGPDAAERR GSGFPTGRGT+DG+LKA HDLQATPARPGK
Subjt:  RGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPGK

Query:  ATRLG
        ATRLG
Subjt:  ATRLG

A0A4D8XZM5 Uncharacterized protein5.6e-4984.43Show/hide
Query:  LGRAADLLRTP-VGISARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDG
        LGRAA LLR P V  + RGLEPYCGRDASRAGLLEMRPFG+AKSI GHQTLQLM+RPY   GS+Y+VTL AFQRCLEDGPDAAERRPGSGFP GRGT DG
Subjt:  LGRAADLLRTP-VGISARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDG

Query:  HLKAQHDLQATPARPGKATRLG
        HLKA HDLQATPARPGKATRLG
Subjt:  HLKAQHDLQATPARPGKATRLG

A0A5Q3A031 Uncharacterized protein1.9e-5257.08Show/hide
Query:  LQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPGKATRLG----------------------------
        +QLMRRPYGVKGS+Y+VTL A QRCL+DGPDAAERRPGS FP+G GT DGHL+A HDLQATPARPG+ATRLG                            
Subjt:  LQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPGKATRLG----------------------------

Query:  ----------------------------------LYRQQQRRFDRGLPFHYFFHDEGTASASASVEVVERPPESKRELPHLSPRDTIQYQNRLKESEEAA
                                          LYRQQQ RFD GL FHYFFHDEGT  A ASV+ VERPPESK EL HLSPR+TI+Y NRLKESE AA
Subjt:  ----------------------------------LYRQQQRRFDRGLPFHYFFHDEGTASASASVEVVERPPESKRELPHLSPRDTIQYQNRLKESEEAA

Query:  TLLAQPTGKPLLSGLHQVH
        TL A   G PLLSGLHQVH
Subjt:  TLLAQPTGKPLLSGLHQVH

A0A654IE03 Orf145 protein4.0e-4788.79Show/hide
Query:  ARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPG
        AR L PYC RDASRAGLLEMRPFGEAKSI GHQTLQLMRRPYGVKGS+Y+VTL AFQRCLEDGPDAAERRPGSGFPTGRGT DGHL+A HDLQA PARPG
Subjt:  ARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPG

Query:  KATRLGL
        KATRLG+
Subjt:  KATRLGL

B6VJZ2 ORF1454.0e-4788.79Show/hide
Query:  ARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPG
        AR L PYC RDASRAGLLEMRPFGEAKSI GHQTLQLMRRPYGVKGS+Y+VTL AFQRCLEDGPDAAERRPGSGFPTGRGT DGHL+A HDLQA PARPG
Subjt:  ARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHDLQATPARPG

Query:  KATRLGL
        KATRLG+
Subjt:  KATRLGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTGGTTTAGGTAGGGCGGCCGACCTACTACGGACACCTGTAGGGATTAGTGCGCGAGGTTTGGAACCCTACTGCGGGAGGGACGCCTCGCGAGCCGGGCTTCT
AGAGATGAGGCCTTTTGGCGAAGCCAAGTCAATTTTGGGCCACCAAACCCTGCAACTGATGAGAAGGCCCTATGGAGTAAAGGGAAGCATGTACATTGTCACACTCCTTG
CCTTCCAAAGGTGCCTAGAGGACGGGCCAGACGCAGCAGAGCGACGACCCGGGAGCGGATTCCCCACTGGTAGGGGGACAGAAGACGGCCATCTCAAGGCACAGCACGAC
CTACAGGCAACACCGGCGAGACCTGGGAAGGCAACCCGATTGGGACTATACAGGCAACAACAAAGGCGGTTTGACCGGGGGCTTCCCTTTCATTACTTCTTTCACGACGA
GGGAACCGCGTCCGCATCCGCATCAGTTGAAGTGGTGGAACGCCCTCCTGAGTCAAAGAGAGAGCTTCCGCACCTCTCTCCAAGAGATACGATTCAGTATCAGAATCGGC
TGAAGGAGAGTGAAGAGGCGGCAACTCTCCTAGCCCAGCCTACGGGGAAGCCTCTTCTTTCTGGTCTACATCAAGTGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATTGGTTTAGGTAGGGCGGCCGACCTACTACGGACACCTGTAGGGATTAGTGCGCGAGGTTTGGAACCCTACTGCGGGAGGGACGCCTCGCGAGCCGGGCTTCT
AGAGATGAGGCCTTTTGGCGAAGCCAAGTCAATTTTGGGCCACCAAACCCTGCAACTGATGAGAAGGCCCTATGGAGTAAAGGGAAGCATGTACATTGTCACACTCCTTG
CCTTCCAAAGGTGCCTAGAGGACGGGCCAGACGCAGCAGAGCGACGACCCGGGAGCGGATTCCCCACTGGTAGGGGGACAGAAGACGGCCATCTCAAGGCACAGCACGAC
CTACAGGCAACACCGGCGAGACCTGGGAAGGCAACCCGATTGGGACTATACAGGCAACAACAAAGGCGGTTTGACCGGGGGCTTCCCTTTCATTACTTCTTTCACGACGA
GGGAACCGCGTCCGCATCCGCATCAGTTGAAGTGGTGGAACGCCCTCCTGAGTCAAAGAGAGAGCTTCCGCACCTCTCTCCAAGAGATACGATTCAGTATCAGAATCGGC
TGAAGGAGAGTGAAGAGGCGGCAACTCTCCTAGCCCAGCCTACGGGGAAGCCTCTTCTTTCTGGTCTACATCAAGTGCATTGA
Protein sequenceShow/hide protein sequence
MMIGLGRAADLLRTPVGISARGLEPYCGRDASRAGLLEMRPFGEAKSILGHQTLQLMRRPYGVKGSMYIVTLLAFQRCLEDGPDAAERRPGSGFPTGRGTEDGHLKAQHD
LQATPARPGKATRLGLYRQQQRRFDRGLPFHYFFHDEGTASASASVEVVERPPESKRELPHLSPRDTIQYQNRLKESEEAATLLAQPTGKPLLSGLHQVH