; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G006290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionZinc finger protein ZAT3
Genome locationchr10:8771475..8793918
RNA-Seq ExpressionLsi10G006290
SyntenyLsi10G006290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011807.1 Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-0740.71Show/hide
Query:  QPKEDWAMDESSIIEEDQDIVN---AFANGPNLIFRA--FPIVDSMC----GSHQTLGGRRARHKNVGGCFATEKSDE-----LCLGNVAM-REINLENQ
        +P+ D  ++ES+  EE+QD+ N     A+ P+ I R   F    + C    GSHQ LGG RA HKNV GC A  KSDE        G+      INLE++
Subjt:  QPKEDWAMDESSIIEEDQDIVN---AFANGPNLIFRA--FPIVDSMC----GSHQTLGGRRARHKNVGGCFATEKSDE-----LCLGNVAM-REINLENQ

Query:  MSMMILRTTGYKC
        MSM++    G+KC
Subjt:  MSMMILRTTGYKC

TYK23290.1 zinc finger protein ZAT3 [Cucumis melo var. makuwa]1.5e-1046.15Show/hide
Query:  SSIIEEDQDIVNA---FANGPNLIFRAFPIVDS---------MCGSHQTLGGRRARHKNVGGCFATEKSDE-------LCLGNVAMRE--INLENQMSMM
        +S  EEDQDI N+    ANGPN  F    + DS         + GSHQ LGG RA HKNV GCFA  KSDE          G+    E   NLEN+MSMM
Subjt:  SSIIEEDQDIVNA---FANGPNLIFRAFPIVDS---------MCGSHQTLGGRRARHKNVGGCFATEKSDE-------LCLGNVAMRE--INLENQMSMM

Query:  ILRTT---GYKCHWENN
        IL T      +  WENN
Subjt:  ILRTT---GYKCHWENN

XP_011659693.1 zinc finger protein ZAT3 [Cucumis sativus]6.7e-1145.69Show/hide
Query:  SSIIEEDQDIVNA---FANGPNLIFRAFPIVDS---------MCGSHQTLGGRRARHKNVGGCFATEKSDE-------LCLGNVAM--REINLENQMSMM
        +S  EEDQDI N+    ANGPN  F    + DS         + GSHQ LGG RA HKNV GCFA  +SDE          G+     R  NLEN+MSMM
Subjt:  SSIIEEDQDIVNA---FANGPNLIFRAFPIVDS---------MCGSHQTLGGRRARHKNVGGCFATEKSDE-------LCLGNVAM--REINLENQMSMM

Query:  ILRTTGY--KCHWENN
        IL T  +  +  WENN
Subjt:  ILRTTGY--KCHWENN

XP_023554558.1 zinc finger protein ZAT3-like [Cucurbita pepo subsp. pepo]2.0e-0740.71Show/hide
Query:  QPKEDWAMDESSIIEEDQDIVN---AFANGPNLIFRA--FPIVDSMC----GSHQTLGGRRARHKNVGGCFATEKSDE-----LCLGNVAM-REINLENQ
        +P+ D  ++ES+  EE+QD+ N     A+ P+ I R   F    + C    GSHQ LGG RA HKNV GC A  KSDE        G+      INLE++
Subjt:  QPKEDWAMDESSIIEEDQDIVN---AFANGPNLIFRA--FPIVDSMC----GSHQTLGGRRARHKNVGGCFATEKSDE-----LCLGNVAM-REINLENQ

Query:  MSMMILRTTGYKC
        MSM++    G+KC
Subjt:  MSMMILRTTGYKC

XP_038888914.1 zinc finger protein ZAT3 [Benincasa hispida]2.9e-1450Show/hide
Query:  ESSIIEEDQDIVNA---FANGPNLIFRAFPI------VDSMCGSHQTLGGRRARHKNVGGCFATEKSDELCLGNVAM--------REINLENQMSMMILR
        ESS  EEDQDI N     ANGPN I R             + GSHQ LGG RA HKNV GCFA  KSDE     + +          INLEN+MSMMIL 
Subjt:  ESSIIEEDQDIVNA---FANGPNLIFRAFPI------VDSMCGSHQTLGGRRARHKNVGGCFATEKSDELCLGNVAM--------REINLENQMSMMILR

Query:  TTGYK-CHWENN
        T  +K  HWENN
Subjt:  TTGYK-CHWENN

TrEMBL top hitse value%identityAlignment
A0A0A0K0V4 Uncharacterized protein3.2e-1145.69Show/hide
Query:  SSIIEEDQDIVNA---FANGPNLIFRAFPIVDS---------MCGSHQTLGGRRARHKNVGGCFATEKSDE-------LCLGNVAM--REINLENQMSMM
        +S  EEDQDI N+    ANGPN  F    + DS         + GSHQ LGG RA HKNV GCFA  +SDE          G+     R  NLEN+MSMM
Subjt:  SSIIEEDQDIVNA---FANGPNLIFRAFPIVDS---------MCGSHQTLGGRRARHKNVGGCFATEKSDE-------LCLGNVAM--REINLENQMSMM

Query:  ILRTTGY--KCHWENN
        IL T  +  +  WENN
Subjt:  ILRTTGY--KCHWENN

A0A5D3DIU1 Zinc finger protein ZAT37.2e-1146.15Show/hide
Query:  SSIIEEDQDIVNA---FANGPNLIFRAFPIVDS---------MCGSHQTLGGRRARHKNVGGCFATEKSDE-------LCLGNVAMRE--INLENQMSMM
        +S  EEDQDI N+    ANGPN  F    + DS         + GSHQ LGG RA HKNV GCFA  KSDE          G+    E   NLEN+MSMM
Subjt:  SSIIEEDQDIVNA---FANGPNLIFRAFPIVDS---------MCGSHQTLGGRRARHKNVGGCFATEKSDE-------LCLGNVAMRE--INLENQMSMM

Query:  ILRTT---GYKCHWENN
        IL T      +  WENN
Subjt:  ILRTT---GYKCHWENN

A0A6J1GNF2 zinc finger protein ZAT3-like8.2e-0739.82Show/hide
Query:  QPKEDWAMDESSIIEEDQDIVN---AFANGPNLIFRA--FPIVDSMC----GSHQTLGGRRARHKNVGGCFATEKSDE-----LCLGNVAM-REINLENQ
        +P+ D  ++ES+  EE+QD+ N     A+ P+ I R   F    + C     SHQ LGG RA HKNV GC A  KSDE        G+      INLE++
Subjt:  QPKEDWAMDESSIIEEDQDIVN---AFANGPNLIFRA--FPIVDSMC----GSHQTLGGRRARHKNVGGCFATEKSDE-----LCLGNVAM-REINLENQ

Query:  MSMMILRTTGYKC
        MSM++    G+KC
Subjt:  MSMMILRTTGYKC

A0A6J1HX25 zinc finger protein ZAT3-like4.8e-0738.94Show/hide
Query:  QPKEDWAMDESSIIEEDQDIVN---AFANGPNLIFRA--FPIVDSMC----GSHQTLGGRRARHKNVGGCFATEKSDELCLGNVAM------REINLENQ
        +P+ D  ++ S+  EE+QD+ N     A+ P+ I R   F    + C    GSHQ LGG RA HKNV GC A  KSDE    +           INLE++
Subjt:  QPKEDWAMDESSIIEEDQDIVN---AFANGPNLIFRA--FPIVDSMC----GSHQTLGGRRARHKNVGGCFATEKSDELCLGNVAM------REINLENQ

Query:  MSMMILRTTGYKC
        MSM++    G+KC
Subjt:  MSMMILRTTGYKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGCCGTGGGTGGCTGCCGGCAGCCGAAGGAAGATTGGGCGATGGACGAATCTTCAATTATCGAAGAAGATCAAGACATCGTTAATGCTTTTGCCAATGGCCC
TAATTTGATTTTTAGAGCGTTTCCGATTGTCGATTCGATGTGTGGGTCGCATCAAACTCTTGGAGGGCGTAGGGCAAGGCATAAGAATGTGGGAGGTTGTTTTGCTACAG
AAAAAAGCGATGAACTCTGTTTGGGCAATGTGGCCATGAGAGAGATCAATCTGGAGAATCAAATGTCAATGATGATTTTAAGAACAACAGGTTATAAATGCCATTGGGAG
AATAATGTCACGAAGCTGTCTGAGATTAAGAGGGAAGATGTATTTATGGTCGCCATCAAGCAATTTCTTGGCAATAATAAGATTGGCAGCTTCACTTGGATGTATAGTAT
AGTTACCATAATTGTCATAGTTGACGATGAGTTCCATGACAAGATCATAGACATTGGCATAGACAAAAGTGGAGGAAGGAAGATTTTTGTTAAGATTGGCAAGCAAATCC
TTCAATTTGGCATTGTATTGAAGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCGCCGTGGGTGGCTGCCGGCAGCCGAAGGAAGATTGGGCGATGGACGAATCTTCAATTATCGAAGAAGATCAAGACATCGTTAATGCTTTTGCCAATGGCCC
TAATTTGATTTTTAGAGCGTTTCCGATTGTCGATTCGATGTGTGGGTCGCATCAAACTCTTGGAGGGCGTAGGGCAAGGCATAAGAATGTGGGAGGTTGTTTTGCTACAG
AAAAAAGCGATGAACTCTGTTTGGGCAATGTGGCCATGAGAGAGATCAATCTGGAGAATCAAATGTCAATGATGATTTTAAGAACAACAGGTTATAAATGCCATTGGGAG
AATAATGTCACGAAGCTGTCTGAGATTAAGAGGGAAGATGTATTTATGGTCGCCATCAAGCAATTTCTTGGCAATAATAAGATTGGCAGCTTCACTTGGATGTATAGTAT
AGTTACCATAATTGTCATAGTTGACGATGAGTTCCATGACAAGATCATAGACATTGGCATAGACAAAAGTGGAGGAAGGAAGATTTTTGTTAAGATTGGCAAGCAAATCC
TTCAATTTGGCATTGTATTGAAGGGCTAA
Protein sequenceShow/hide protein sequence
MAAAVGGCRQPKEDWAMDESSIIEEDQDIVNAFANGPNLIFRAFPIVDSMCGSHQTLGGRRARHKNVGGCFATEKSDELCLGNVAMREINLENQMSMMILRTTGYKCHWE
NNVTKLSEIKREDVFMVAIKQFLGNNKIGSFTWMYSIVTIIVIVDDEFHDKIIDIGIDKSGGRKIFVKIGKQILQFGIVLKG