; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G006390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPatatin
Genome locationchr10:8912861..8919017
RNA-Seq ExpressionLsi10G006390
SyntenyLsi10G006390
Gene Ontology termsGO:0016042 - lipid catabolic process (biological process)
GO:0016298 - lipase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFJ92643.2 phospholipase A2 [Eschscholzia californica]8.5e-0737.07Show/hide
Query:  VSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQIQQGLLHWFLGHQVVQTFQIPNLPLTMVSS--ANSLPHRSS--LVNSRRSQCPQMIRHHS
        V   G  KG+L T+LSIDGGG+RG+IPG +L+FLESKLQ++    +       VV       L  TM+++  AN  P+ ++  LV      CP +    S
Subjt:  VSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQIQQGLLHWFLGHQVVQTFQIPNLPLTMVSS--ANSLPHRSS--LVNSRRSQCPQMIRHHS

Query:  TCHPIQSSIPHFEAVA
        +C  +  S  +F   A
Subjt:  TCHPIQSSIPHFEAVA

ONK60784.1 uncharacterized protein A4U43_C08F22570 [Asparagus officinalis]8.5e-0771.43Show/hide
Query:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        +VS+P   +GKL T+LSIDGGG+RGIIPGTIL FLESKLQ++
Subjt:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

XP_004148073.1 patatin-like protein 2 [Cucumis sativus]1.9e-0674.36Show/hide
Query:  DPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        +P + KG+L TILSIDGGG+RGIIPGTIL FLESKLQ++
Subjt:  DPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

XP_020242116.1 LOW QUALITY PROTEIN: patatin-like protein 2 [Asparagus officinalis]8.5e-0771.43Show/hide
Query:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        +VS+P   +GKL T+LSIDGGG+RGIIPGTIL FLESKLQ++
Subjt:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

XP_022149527.1 patatin-like protein 3 [Momordica charantia]8.5e-0783.33Show/hide
Query:  YRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        +RKGK+ TILSIDGGGIRGIIPGTIL FLESKLQ++
Subjt:  YRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

TrEMBL top hitse value%identityAlignment
A0A5A7TQM4 Patatin1.2e-0669.05Show/hide
Query:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        M S+  YRKG+ RTILSIDGGGIRGIIPG IL FLE++L+++
Subjt:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

A0A6J1D878 Patatin4.1e-0783.33Show/hide
Query:  YRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        +RKGK+ TILSIDGGGIRGIIPGTIL FLESKLQ++
Subjt:  YRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

A0A6J1G7L9 Patatin9.1e-0776.32Show/hide
Query:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        P + KGK+ TILS+DGGGIRGIIPGTIL FLESKLQ++
Subjt:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

A0A6J1KXN6 Patatin9.1e-0776.32Show/hide
Query:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        P + KGK+ TILS+DGGGIRGIIPGTIL FLESKLQ++
Subjt:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

A0A6J1KZK6 Patatin9.1e-0776.32Show/hide
Query:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        P + KGK+ TILS+DGGGIRGIIPGTIL FLESKLQ++
Subjt:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

SwissProt top hitse value%identityAlignment
A2YW91 Patatin-like protein 21.3e-0567.65Show/hide
Query:  KGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        K K+ T+LSIDGGG+RGIIP TIL FLE +LQ++
Subjt:  KGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

B8AQW7 Patatin-like protein 15.2e-0757.14Show/hide
Query:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        +V +P    G+  T+L+IDGGGIRG+IPGTIL FLE++LQ++
Subjt:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

O23181 Patatin-like protein 33.9e-0773.68Show/hide
Query:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        P Y  G+L TILSIDGGGIRGIIPGTIL +LES+LQ++
Subjt:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

Q84QY3 Patatin-like protein 15.2e-0757.14Show/hide
Query:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        +V +P    G+  T+L+IDGGGIRG+IPGTIL FLE++LQ++
Subjt:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

Q8LPW4 Patatin-171.3e-0569.7Show/hide
Query:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        G++ T+LSIDGGGIRGIIP TIL FLE +LQ++
Subjt:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

Arabidopsis top hitse value%identityAlignment
AT2G26560.1 phospholipase A 2A1.5e-0672.73Show/hide
Query:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        G L TILSIDGGGIRG+IP  IL FLES+LQ++
Subjt:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

AT4G37050.1 PATATIN-like protein 42.8e-0873.68Show/hide
Query:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        P Y  G+L TILSIDGGGIRGIIPGTIL +LES+LQ++
Subjt:  PGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

AT4G37070.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein4.5e-0666.67Show/hide
Query:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        G L TILS+DGGG+RGII G IL FLE +LQ++
Subjt:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein4.5e-0666.67Show/hide
Query:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        G L TILS+DGGG+RGII G IL FLE +LQ++
Subjt:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI

AT4G37070.3 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein4.5e-0666.67Show/hide
Query:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI
        G L TILS+DGGG+RGII G IL FLE +LQ++
Subjt:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGATCCTGGTTATAGGAAGGGGAAATTGAGAACAATTTTGAGCATTGATGGTGGTGGCATTAGAGGCATTATTCCCGGAACTATTCTAACTTTTCTCGAGTC
CAAGCTTCAGCAAATTCAGCAAGGGCTTCTTCATTGGTTCCTTGGCCATCAAGTGGTTCAAACTTTCCAGATTCCAAATTTACCCTTGACAATGGTTTCTTCAGCAAATT
CTCTCCCACATAGATCAAGTTTAGTAAATTCTCGTCGGTCGCAATGTCCACAGATGATACGTCACCACTCAACGTGTCATCCTATCCAATCAAGCATACCCCATTTTGAA
GCTGTAGCTGCACTATACTTTTCATCGTTCTTAGGTGTACCAGTACCTAAAGACAGAACCAACATCCTTTTTGTTTCCATGGGTAAGAAAGTTGGTGCAGCAGACGTACT
GATGCAGACATCGGCCAGTTTTGGATTCTTCAACTCGTTGCATTTAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTGATCCTGGTTATAGGAAGGGGAAATTGAGAACAATTTTGAGCATTGATGGTGGTGGCATTAGAGGCATTATTCCCGGAACTATTCTAACTTTTCTCGAGTC
CAAGCTTCAGCAAATTCAGCAAGGGCTTCTTCATTGGTTCCTTGGCCATCAAGTGGTTCAAACTTTCCAGATTCCAAATTTACCCTTGACAATGGTTTCTTCAGCAAATT
CTCTCCCACATAGATCAAGTTTAGTAAATTCTCGTCGGTCGCAATGTCCACAGATGATACGTCACCACTCAACGTGTCATCCTATCCAATCAAGCATACCCCATTTTGAA
GCTGTAGCTGCACTATACTTTTCATCGTTCTTAGGTGTACCAGTACCTAAAGACAGAACCAACATCCTTTTTGTTTCCATGGGTAAGAAAGTTGGTGCAGCAGACGTACT
GATGCAGACATCGGCCAGTTTTGGATTCTTCAACTCGTTGCATTTAGCCTAA
Protein sequenceShow/hide protein sequence
MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQQIQQGLLHWFLGHQVVQTFQIPNLPLTMVSSANSLPHRSSLVNSRRSQCPQMIRHHSTCHPIQSSIPHFE
AVAALYFSSFLGVPVPKDRTNILFVSMGKKVGAADVLMQTSASFGFFNSLHLA