CuGenDBv2

Gene ID	Lsi10G006440
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	upstream activation factor subunit UAF30-like
Genome location	chr10:8981816..8992387
RNA-Seq Expression	Lsi10G006440
Synteny	Lsi10G006440
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR003121 - SWIB/MDM2 domain IPR014876 - DEK, C-terminal IPR019835 - SWIB domain IPR036885 - SWIB/MDM2 domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK13709.1 upstream activation factor subunit UAF30-like [Cucumis melo var. makuwa]

3.2e-133

89.86

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELIGRLR+FLRNSDL+TTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHE+AVEE  G C+EV+QE GDENLK E EDGDSEDGDNDDE+
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
        DEKGK  S+K      K+ GGGFSKLCSLSPQLQEFIGA EMARTEVV+QLWNHIRENNLQDPSNRRNILCDE LKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ
        ESNDVIPAK SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LSDALV FLGTGEDALPRSDVVKRMWDYIKQNNLQ
Subjt:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ

XP_008457882.1 PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo]

3.8e-134

87.38

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELIGRLR+FLRNSDL+TTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHE+AVEE  G C+EV+QE GDENLK E EDGDSEDGDNDDE+
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
        DEKGK  S+K      K+ GGGFSKLCSLSPQLQEFIGA EMARTEVV+QLWNHIRENNLQDPSNRRNILCDE LKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQRKHG
        ESNDVIPAK SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LSDALV FLGTGEDALPRSDVVKRMWDYIKQNNLQ    
Subjt:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQRKHG

Query:  YFHLIKDER
           +I DER
Subjt:  YFHLIKDER

XP_038901460.1 upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]

5.0e-147

92.88

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELIGRLREFLRNSDL+TTTTAIVRRKLEEDFGIDLSDKKRFIREQVD+FLQTEHERAVEE CGDC+EVDQEGGDENLKTE +DGDSEDGDNDDE+
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
        DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVV+QLWNHIR  NLQDPSNRRNILCD+SLKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPA-KSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQRKHG
        ESNDVIPA  SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ    
Subjt:  ESNDVIPA-KSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQRKHG

Query:  YFHLIKDER
           +I DER
Subjt:  YFHLIKDER

XP_038901461.1 protein TRI1-like isoform X2 [Benincasa hispida]

4.3e-146

95.61

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELIGRLREFLRNSDL+TTTTAIVRRKLEEDFGIDLSDKKRFIREQVD+FLQTEHERAVEE CGDC+EVDQEGGDENLKTE +DGDSEDGDNDDE+
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
        DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVV+QLWNHIR  NLQDPSNRRNILCD+SLKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPA-KSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ
        ESNDVIPA  SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ
Subjt:  ESNDVIPA-KSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ

XP_038901462.1 protein TRI1-like isoform X3 [Benincasa hispida]

4.3e-146

95.61

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELIGRLREFLRNSDL+TTTTAIVRRKLEEDFGIDLSDKKRFIREQVD+FLQTEHERAVEE CGDC+EVDQEGGDENLKTE +DGDSEDGDNDDE+
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
        DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVV+QLWNHIR  NLQDPSNRRNILCD+SLKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPA-KSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ
        ESNDVIPA  SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ
Subjt:  ESNDVIPA-KSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJW7 Uncharacterized protein

1.2e-130

85.11

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELI RLR+FLRNSDL+TTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHE+AV+E    C+EV QE GDENLK E EDGDSEDGDND+E+
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
        DEKGK  S K+     K+ GGGF+KLCSLSPQLQEFIGAPEMARTEVV+QLWNHIRENNLQDPSNRRNILCDE LKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQRKHG
        ESNDVIPAK SQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGEDALPRSDVVKRMWDYIKQNNLQ    
Subjt:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQRKHG

Query:  YFHLIKDER
           +I DER
Subjt:  YFHLIKDER

A0A1S3C766 upstream activation factor subunit UAF30-like

1.8e-134

87.38

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELIGRLR+FLRNSDL+TTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHE+AVEE  G C+EV+QE GDENLK E EDGDSEDGDNDDE+
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
        DEKGK  S+K      K+ GGGFSKLCSLSPQLQEFIGA EMARTEVV+QLWNHIRENNLQDPSNRRNILCDE LKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQRKHG
        ESNDVIPAK SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LSDALV FLGTGEDALPRSDVVKRMWDYIKQNNLQ    
Subjt:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQRKHG

Query:  YFHLIKDER
           +I DER
Subjt:  YFHLIKDER

A0A5D3CU37 Upstream activation factor subunit UAF30-like

1.5e-133

89.86

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELIGRLR+FLRNSDL+TTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHE+AVEE  G C+EV+QE GDENLK E EDGDSEDGDNDDE+
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
        DEKGK  S+K      K+ GGGFSKLCSLSPQLQEFIGA EMARTEVV+QLWNHIRENNLQDPSNRRNILCDE LKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ
        ESNDVIPAK SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LSDALV FLGTGEDALPRSDVVKRMWDYIKQNNLQ
Subjt:  ESNDVIPAK-SQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ

A0A6J1EMX5 upstream activation factor subunit UAF30-like

1.0e-132

85.67

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELI RLREFLR+SDL+ TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHER  EE  GDC+E DQE GDENLKTE EDGDSEDGDNDD +
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
        DEKGK GSNKL+   KKRGGGGFSKLCSLSPQLQEFIG PEMARTEVV+QLWNHIR NNLQDPSNRRNILCDESLKALF V+SINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKS------QKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNL
        ESNDVIPAKS      QKEKQ+KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE AL RSDVVKRMWDYIKQNNL
Subjt:  ESNDVIPAKS------QKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNL

Query:  QRKHGYFHLIKDER
        Q       +I DE+
Subjt:  QRKHGYFHLIKDER

A0A6J1I6I7 upstream activation factor subunit spp27-like

3.0e-129

84.08

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDSELI RLREFLR+SDL+ TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHER  EE  GDC+E DQE GDENLKTE EDGDSEDGDND  +
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
         EKGK GSNKL+   KKRGGGGFSKLCSLSPQLQEFIG PEMARTEVV+QLWNHIR NNLQDPSNRRNILCDESLKALF V+SINMFQMNKALSKHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKS------QKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNL
        ESNDVIPAKS      Q+EKQ+KEKQPKEK QKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++L RSDVVKRMWDYIKQNNL
Subjt:  ESNDVIPAKS------QKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNL

Query:  QRKHGYFHLIKDER
        Q       +I DE+
Subjt:  QRKHGYFHLIKDER

SwissProt top hits

e value

%identity

Alignment

O74503 Upstream activation factor subunit spp27

6.2e-07

26.38

Show/hide

Query:  LREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLK-TEAEDGDSEDGDNDDEEDEKGKAGSN
        +++ L   D  T +   VR+ LEE   +DLS  K+ +     L L+   E A   A  + + ++++      K   A +  +E+G    +   K K    
Subjt:  LREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLK-TEAEDGDSEDGDNDDEEDEKGKAGSN

Query:  KLSKEGKKR--GGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPLESNDVIP
        +  K  + +       +K   LSP+L EF+G  +++R + V++LW +I+ ++LQDP+++R ILCD+ LK++F V++++MF MNK L+  +  +  +D +P
Subjt:  KLSKEGKKR--GGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPLESNDVIP

Query:  AKSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSA
            + K ++   P + P+++ ++  +   ++ +A
Subjt:  AKSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSA

Q05024 Protein TRI1

4.2e-11

30.26

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQV-DLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDE
        M   ++ I  +   L  S+ D  +   VR+ L+  + ++L  +++ I E + + F   +    V     D    DQE    +L+ + E+      +    
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQV-DLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDE

Query:  EDEKGKAGSNKLSKEGKKRGGGGFSKLCS-----LSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALS
           K K  S   SK  KK+     S   S     LS  LQ+F+G+ E+ RT+VV+ +W +I+E++LQ+P +RR ILCDE ++ +FG   + MF MNK L+
Subjt:  EDEKGKAGSNKLSKEGKKRGGGGFSKLCS-----LSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALS

Query:  KHIWPLESNDVIPAKSQKEKQQKEKQPK
        KH++   + D I    +++KQ  EK+ K
Subjt:  KHIWPLESNDVIPAKSQKEKQQKEKQPK

Q08747 Upstream activation factor subunit UAF30

2.4e-11

30.88

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Query:  LRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEEDEKGKAGSNKLSKE
        L + DL+T TT  VR  L+E + ID+  + + I + +   L    ER   E     +++ +E     ++   E   S+    +++ D + K G++   K+
Subjt:  LRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEEDEKGKAGSNKLSKE

Query:  GKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIW-PLESNDVIPAKSQKE
        G        ++  +LS  L   +G  E+ RTEVVR+LW +I+ +NLQ+P+N++ ILCDE L+ + G  S NMF+M+K L+ H+  P + +D  P   +  
Subjt:  GKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIW-PLESNDVIPAKSQKE

Query:  KQQK
        +++K
Subjt:  KQQK

Arabidopsis top hits

e value

%identity

Alignment

AT1G49520.1 SWIB complex BAF60b domain-containing protein

2.4e-54

44.75

Show/hide

Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSDS+L+ +LRE LR+SDL+TTT A VRR+LE  FG++L+DKK F+REQ+D FL+++   A+ E+  + QE +   GD+N        D E  +NDD++
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
         E        L  + KKR GGGF+K+C LSPQL++F+G  ++ARTEVV+++W +IRE++LQDP+NRRNILCDESL +LF V +INMFQMNKAL+KHIW L
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVI--------PAKSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKS---------GFLAPLQLSDALVTFLGTGEDALPRSDVVK
           D            ++  E+ +K+ + +E  +   ++  +EED     R+ K++K  KS         GF     LS  L  F GT +  L R++VVK
Subjt:  ESNDVI--------PAKSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKS---------GFLAPLQLSDALVTFLGTGEDALPRSDVVK

Query:  RMWDYIKQNNLQRKHGYFHLIKDE
         +W YIK+NNLQ       +I DE
Subjt:  RMWDYIKQNNLQRKHGYFHLIKDE

AT2G14880.1 SWIB/MDM2 domain superfamily protein

2.3e-12

39.51

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Query:  KRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALF-GVNSINMFQMNKALSKH
        KR   G  K   +SP++Q+ +  PE+ART+ ++++W +I+E++LQDP N+R ILCDE LK +F G + +   ++ K +  H
Subjt:  KRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALF-GVNSINMFQMNKALSKH

AT2G35605.1 SWIB/MDM2 domain superfamily protein

2.1e-13

43.01

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Query:  KAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALF-GVNSINMFQMNKALSKH
        KA S+  +K G  R G G  K+  +S  L  FIG  E++RT  V+++W +I+ NNLQ+P N+R ILCDE LK +F G +++   +++K LS+H
Subjt:  KAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALF-GVNSINMFQMNKALSKH

AT3G19080.1 SWIB complex BAF60b domain-containing protein

3.8e-52

44.89

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Query:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE
        MVSD +L+ RLRE L +SDL+T T A VRR+LE DFG+DL+DKK +IR+Q+D FL  E   AVE+   +  +V++    + +K E E GD ED D D   
Subjt:  MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEE

Query:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL
         E+ K    +   + KKR GGG +K+  LSPQL++ +GA ++ RTEVV+++W +IRE +LQDP +RR I+CDE L +LF V +INMFQMNKAL+KHIWPL
Subjt:  DEKGKAGSNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESND--VIPAKSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDD----SAREEKRQK----------KGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKR
           D      K + E +  E   K+  Q +  ++ KEE+S++    S R+ KR+K          KG  GF     LS  L  F G  E  L R++VVK 
Subjt:  ESND--VIPAKSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDD----SAREEKRQK----------KGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKR

Query:  MWDYIKQNNLQRKHGYFHLIKDE
        +W YIK+NNLQ  +    +I DE
Subjt:  MWDYIKQNNLQRKHGYFHLIKDE

AT4G22360.1 SWIB complex BAF60b domain-containing protein

6.0e-29

36.67

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Query:  KKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSQKEKQ
        +K G GG +K+C +SP+L+  +G P + RTE+VRQLW +IR+NNLQDPSN+R I+CD++L+ +F  +  +MF+MNK L+KHI PL+ +            
Subjt:  KKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSQKEKQ

Query:  QKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ
                    K   Q K+  ++   + E  +    +   + + LS+ L  F GTGE  +   ++++R+W+YIK NNL+
Subjt:  QKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQ

Sequences

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CDS sequence

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ATGGTTTCCGACTCGGAGCTCATCGGCCGGCTCCGAGAGTTTCTTCGGAATTCCGACCTCGATACCACCACCACTGCTATCGTTCGCCGGAAGCTCGAGGAGGACTTTGG
CATTGATTTGTCTGATAAGAAGCGGTTTATTAGGGAACAGGTCGACTTGTTCCTCCAGACTGAGCACGAGAGAGCCGTCGAAGAAGCTTGCGGTGACTGCCAGGAAGTCG
ACCAGGAGGGTGGAGATGAAAATTTGAAGACCGAAGCGGAGGATGGAGATAGTGAAGATGGAGATAACGACGACGAAGAGGATGAAAAGGGTAAAGCGGGTTCTAACAAG
CTTAGTAAAGAGGGGAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCCCCACAACTGCAGGAATTTATAGGAGCTCCTGAAATGGCAAGGACTGAGGT
TGTTAGGCAACTATGGAACCACATTAGAGAGAACAATTTGCAAGACCCCAGTAACAGAAGAAATATTCTCTGTGATGAATCGTTGAAAGCACTCTTTGGTGTCAATTCCA
TCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCATTGGAATCAAACGACGTTATTCCAGCCAAAAGTCAGAAAGAAAAGCAACAAAAGGAGAAGCAG
CCAAAGGAGAAGCCACAAAAGAAGCGGCAGAAGCAAGGAAAAGAAGAAGATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGC
TCCTCTTCAACTTTCGGATGCTCTGGTGACATTTCTTGGTACTGGAGAGGATGCATTGCCTCGCTCTGATGTCGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACC
TTCAGAGAAAACATGGTTATTTCCATTTAATCAAGGATGAACGACAGTGGGACCGTACATGTGAGATTGTAATTGAAAGCTCGGATGTGGAAGGATCTTCATTGACGTTG
AAAGGCACTGAAGAACAAGGAAAGTTGTTTGTTCCAGCAAGTTCCGATTGGACATCGAAGCTAGAAGAGATACAAACAATGAAAACAGAAGAAAAGAAGGAAGGGGTGGT
CGGAGTTGATGAAGAAACCACGAGGCGAGGCAAAATTGCGAATGAAAGATTGGAGAAGACTGCGTGGACTAATCCAAATGCCGATAGGTGTCCAAGACGGATTGGAAAGC
AAAGAAGACGTCGAATGGGGCAATCGGCAAAGAGGAAGCTAGCCGGTGGTGAGTGCAACCACGTTAATGGCAGAAGAAGTCGTGAGAATGGAGGGGAGAGAGCAATTGCG
TAA

mRNA sequence

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GTTCCTTCTACGTCCCCAATCTCTCTACCATCTGTTCTTCACGCAAAGCCATTTCCTATTGAAAGTCGAAGCCAAAGGCAGACGCCACACGCCACGGATACTGTACCCTC
AGCTCCAAATCCTACCCACCTATCATCGCCTCCATTTTTCCTCCTTCAATCTCTCAGGTTTTGCTCTTCTTCCATTTAAGATTGTGGATTACAACAATGGTTTCCGACTC
GGAGCTCATCGGCCGGCTCCGAGAGTTTCTTCGGAATTCCGACCTCGATACCACCACCACTGCTATCGTTCGCCGGAAGCTCGAGGAGGACTTTGGCATTGATTTGTCTG
ATAAGAAGCGGTTTATTAGGGAACAGGTCGACTTGTTCCTCCAGACTGAGCACGAGAGAGCCGTCGAAGAAGCTTGCGGTGACTGCCAGGAAGTCGACCAGGAGGGTGGA
GATGAAAATTTGAAGACCGAAGCGGAGGATGGAGATAGTGAAGATGGAGATAACGACGACGAAGAGGATGAAAAGGGTAAAGCGGGTTCTAACAAGCTTAGTAAAGAGGG
GAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCCCCACAACTGCAGGAATTTATAGGAGCTCCTGAAATGGCAAGGACTGAGGTTGTTAGGCAACTAT
GGAACCACATTAGAGAGAACAATTTGCAAGACCCCAGTAACAGAAGAAATATTCTCTGTGATGAATCGTTGAAAGCACTCTTTGGTGTCAATTCCATCAACATGTTTCAA
ATGAATAAAGCTCTATCAAAGCATATTTGGCCATTGGAATCAAACGACGTTATTCCAGCCAAAAGTCAGAAAGAAAAGCAACAAAAGGAGAAGCAGCCAAAGGAGAAGCC
ACAAAAGAAGCGGCAGAAGCAAGGAAAAGAAGAAGATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCAACTTT
CGGATGCTCTGGTGACATTTCTTGGTACTGGAGAGGATGCATTGCCTCGCTCTGATGTCGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACCTTCAGAGAAAACAT
GGTTATTTCCATTTAATCAAGGATGAACGACAGTGGGACCGTACATGTGAGATTGTAATTGAAAGCTCGGATGTGGAAGGATCTTCATTGACGTTGAAAGGCACTGAAGA
ACAAGGAAAGTTGTTTGTTCCAGCAAGTTCCGATTGGACATCGAAGCTAGAAGAGATACAAACAATGAAAACAGAAGAAAAGAAGGAAGGGGTGGTCGGAGTTGATGAAG
AAACCACGAGGCGAGGCAAAATTGCGAATGAAAGATTGGAGAAGACTGCGTGGACTAATCCAAATGCCGATAGGTGTCCAAGACGGATTGGAAAGCAAAGAAGACGTCGA
ATGGGGCAATCGGCAAAGAGGAAGCTAGCCGGTGGTGAGTGCAACCACGTTAATGGCAGAAGAAGTCGTGAGAATGGAGGGGAGAGAGCAATTGCGTAA

Protein sequence

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MVSDSELIGRLREFLRNSDLDTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHERAVEEACGDCQEVDQEGGDENLKTEAEDGDSEDGDNDDEEDEKGKAGSNK
LSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVRQLWNHIRENNLQDPSNRRNILCDESLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSQKEKQQKEKQ
PKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQRKHGYFHLIKDERQWDRTCEIVIESSDVEGSSLTL
KGTEEQGKLFVPASSDWTSKLEEIQTMKTEEKKEGVVGVDEETTRRGKIANERLEKTAWTNPNADRCPRRIGKQRRRRMGQSAKRKLAGGECNHVNGRRSRENGGERAIA

Lsi10G006440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome