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Lsi10G006510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description4-alpha-glucanotransferase
Genome locationchr10:9080245..9080610
RNA-Seq ExpressionLsi10G006510
SyntenyLsi10G006510
Gene Ontology termsGO:0005977 - glycogen metabolic process (biological process)
GO:0004134 - 4-alpha-glucanotransferase activity (molecular function)
GO:0102500 - beta-maltose 4-alpha-glucanotransferase activity (molecular function)
InterPro domainsIPR003385 - Glycoside hydrolase, family 77
IPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038901897.1 4-alpha-glucanotransferase, chloroplastic/amyloplastic isoform X1 [Benincasa hispida]4.3e-5691.74Show/hide
Query:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL
        MAISTS+FPF LTPKLRNPPLP YATTTFLSTR FQ  SSSSSSTHTLKVSTIFDTVTVGEDFP HYGEWFP+SDPDIRRRAGVLLHPTSFRGPYGIGDL
Subjt:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL

Query:  GDEAFRFVDWLYEAGFSVWQV
        GDEAFRF+DWL+EAGFSVWQV
Subjt:  GDEAFRFVDWLYEAGFSVWQV

XP_038901898.1 4-alpha-glucanotransferase, chloroplastic/amyloplastic isoform X2 [Benincasa hispida]4.3e-5691.74Show/hide
Query:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL
        MAISTS+FPF LTPKLRNPPLP YATTTFLSTR FQ  SSSSSSTHTLKVSTIFDTVTVGEDFP HYGEWFP+SDPDIRRRAGVLLHPTSFRGPYGIGDL
Subjt:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL

Query:  GDEAFRFVDWLYEAGFSVWQV
        GDEAFRF+DWL+EAGFSVWQV
Subjt:  GDEAFRFVDWLYEAGFSVWQV

XP_038901899.1 4-alpha-glucanotransferase, chloroplastic/amyloplastic isoform X3 [Benincasa hispida]4.3e-5691.74Show/hide
Query:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL
        MAISTS+FPF LTPKLRNPPLP YATTTFLSTR FQ  SSSSSSTHTLKVSTIFDTVTVGEDFP HYGEWFP+SDPDIRRRAGVLLHPTSFRGPYGIGDL
Subjt:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL

Query:  GDEAFRFVDWLYEAGFSVWQV
        GDEAFRF+DWL+EAGFSVWQV
Subjt:  GDEAFRFVDWLYEAGFSVWQV

XP_038901900.1 4-alpha-glucanotransferase, chloroplastic/amyloplastic isoform X4 [Benincasa hispida]4.3e-5691.74Show/hide
Query:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL
        MAISTS+FPF LTPKLRNPPLP YATTTFLSTR FQ  SSSSSSTHTLKVSTIFDTVTVGEDFP HYGEWFP+SDPDIRRRAGVLLHPTSFRGPYGIGDL
Subjt:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL

Query:  GDEAFRFVDWLYEAGFSVWQV
        GDEAFRF+DWL+EAGFSVWQV
Subjt:  GDEAFRFVDWLYEAGFSVWQV

XP_038901901.1 4-alpha-glucanotransferase, chloroplastic/amyloplastic isoform X5 [Benincasa hispida]4.3e-5691.74Show/hide
Query:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL
        MAISTS+FPF LTPKLRNPPLP YATTTFLSTR FQ  SSSSSSTHTLKVSTIFDTVTVGEDFP HYGEWFP+SDPDIRRRAGVLLHPTSFRGPYGIGDL
Subjt:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL

Query:  GDEAFRFVDWLYEAGFSVWQV
        GDEAFRF+DWL+EAGFSVWQV
Subjt:  GDEAFRFVDWLYEAGFSVWQV

TrEMBL top hitse value%identityAlignment
A0A0A0LQ32 4-alpha-glucanotransferase6.1e-4882.64Show/hide
Query:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL
        MAISTSLF FPL PKLRNP LP ++ TT LSTR F    SSSS     KVSTIFDTVTVGEDFP  YGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL
Subjt:  MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDL

Query:  GDEAFRFVDWLYEAGFSVWQV
        GDEAFRFVDWL+EAGFSVWQV
Subjt:  GDEAFRFVDWLYEAGFSVWQV

A0A6J1DIV2 4-alpha-glucanotransferase4.2e-4980.95Show/hide
Query:  MAISTSLFPFPLTPKLRNPPLPP-----YATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPY
        MAISTSLFPFPLTPKLRNPPL P      A+T  LSTR F PL SSSSSTH L V  IFD+V VGEDFP HYGEWFPE++PD+RRRAGVLLHPTSFRGPY
Subjt:  MAISTSLFPFPLTPKLRNPPLPP-----YATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPY

Query:  GIGDLGDEAFRFVDWLYEAGFSVWQV
        GIGDLGDEAFRFVDWL+EAGFSVWQV
Subjt:  GIGDLGDEAFRFVDWLYEAGFSVWQV

A0A6J1DL91 4-alpha-glucanotransferase4.2e-4980.95Show/hide
Query:  MAISTSLFPFPLTPKLRNPPLPP-----YATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPY
        MAISTSLFPFPLTPKLRNPPL P      A+T  LSTR F PL SSSSSTH L V  IFD+V VGEDFP HYGEWFPE++PD+RRRAGVLLHPTSFRGPY
Subjt:  MAISTSLFPFPLTPKLRNPPLPP-----YATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPY

Query:  GIGDLGDEAFRFVDWLYEAGFSVWQV
        GIGDLGDEAFRFVDWL+EAGFSVWQV
Subjt:  GIGDLGDEAFRFVDWLYEAGFSVWQV

A0A6J1EJ62 4-alpha-glucanotransferase3.6e-4881.6Show/hide
Query:  MAISTSLFPFPLTPKLRNPPL----PPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYG
        MAISTSL PFPL PKLRN PL    P  A TTFLSTR F  LSSSSSS H LKVST+FD VTVGEDFP  YGEWFP+SDPD+RRRAGVLLHPTSFRGPYG
Subjt:  MAISTSLFPFPLTPKLRNPPL----PPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYG

Query:  IGDLGDEAFRFVDWLYEAGFSVWQV
        IGDLGDEAFRF+DWL+EAGFSVWQV
Subjt:  IGDLGDEAFRFVDWLYEAGFSVWQV

A0A6J1I6F3 4-alpha-glucanotransferase6.1e-4880.8Show/hide
Query:  MAISTSLFPFPLTPKLRN----PPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYG
        MAISTSL PFPL PKLRN    PP+P  A TT LSTR F  LSSSSSS H LKVST+FD VTVGEDFP  YGEWFP+SDPD+RRRAGVLLHPTSFRGPYG
Subjt:  MAISTSLFPFPLTPKLRN----PPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYG

Query:  IGDLGDEAFRFVDWLYEAGFSVWQV
        IGDLGDEAFRF+DWL+EAGFSVWQV
Subjt:  IGDLGDEAFRFVDWLYEAGFSVWQV

SwissProt top hitse value%identityAlignment
O66937 4-alpha-glucanotransferase9.7e-1169.05Show/hide
Query:  RRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV
        R AG+LLH TS   PYGIGDLG EA+RF+D+L E GFS+WQV
Subjt:  RRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV

P72785 4-alpha-glucanotransferase9.1e-0958.14Show/hide
Query:  RRRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV
        +R +G+LLHPTS    +GIGDLGD AF+F+D+L +A  SVWQ+
Subjt:  RRRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV

Q06801 4-alpha-glucanotransferase, chloroplastic/amyloplastic1.1e-2249.61Show/hide
Query:  MAISTSLFPFPLTP-KLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVT-----VGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGP
        MAI T    F L P    +P LP    TTF S     P+   S  T        F   T     VGEDFP  Y +W P+ DP+ RRRAG+LLHPTSF GP
Subjt:  MAISTSLFPFPLTP-KLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVT-----VGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGP

Query:  YGIGDLGDEAFRFVDWLYEAGFSVWQV
        YGIGDLG +AF+F+DWL+ AG S+WQV
Subjt:  YGIGDLGDEAFRFVDWLYEAGFSVWQV

Q8LI30 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic1.2e-1660Show/hide
Query:  VTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV
        V VGE+ P  Y +  P  +   RRRAGVLLHPTS RGP+GIGDLGDEA  F+ WL +AG ++WQV
Subjt:  VTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV

Q9LV91 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic4.8e-2669.01Show/hide
Query:  STIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV
        ST   +++VGEDFP+ Y +W P  DP+ RRRAGVLLHPTSFRGP+GIGDLG+EAFRF+DWL+  G SVWQV
Subjt:  STIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV

Arabidopsis top hitse value%identityAlignment
AT5G64860.1 disproportionating enzyme3.4e-2769.01Show/hide
Query:  STIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV
        ST   +++VGEDFP+ Y +W P  DP+ RRRAGVLLHPTSFRGP+GIGDLG+EAFRF+DWL+  G SVWQV
Subjt:  STIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDLGDEAFRFVDWLYEAGFSVWQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCTCAACCTCACTATTCCCTTTTCCTCTAACTCCCAAGCTTCGCAATCCCCCATTGCCTCCCTACGCCACTACTACGTTCCTGTCCACCAGGAGTTTTCAGCC
CTTGTCTTCTTCTTCTTCCTCTACCCACACTCTGAAAGTTTCCACCATTTTTGATACAGTTACTGTGGGGGAGGATTTTCCGGCCCACTATGGCGAATGGTTTCCGGAGT
CGGATCCTGACATTCGGCGAAGAGCAGGTGTTCTGCTACATCCTACGTCGTTTCGAGGACCTTATGGCATTGGTGATCTTGGAGATGAGGCGTTTAGATTTGTTGACTGG
CTTTATGAAGCGGGATTCTCTGTTTGGCAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCTCAACCTCACTATTCCCTTTTCCTCTAACTCCCAAGCTTCGCAATCCCCCATTGCCTCCCTACGCCACTACTACGTTCCTGTCCACCAGGAGTTTTCAGCC
CTTGTCTTCTTCTTCTTCCTCTACCCACACTCTGAAAGTTTCCACCATTTTTGATACAGTTACTGTGGGGGAGGATTTTCCGGCCCACTATGGCGAATGGTTTCCGGAGT
CGGATCCTGACATTCGGCGAAGAGCAGGTGTTCTGCTACATCCTACGTCGTTTCGAGGACCTTATGGCATTGGTGATCTTGGAGATGAGGCGTTTAGATTTGTTGACTGG
CTTTATGAAGCGGGATTCTCTGTTTGGCAGGTTTGA
Protein sequenceShow/hide protein sequence
MAISTSLFPFPLTPKLRNPPLPPYATTTFLSTRSFQPLSSSSSSTHTLKVSTIFDTVTVGEDFPAHYGEWFPESDPDIRRRAGVLLHPTSFRGPYGIGDLGDEAFRFVDW
LYEAGFSVWQV