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Lsi10G006670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationchr10:9274272..9278621
RNA-Seq ExpressionLsi10G006670
SyntenyLsi10G006670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148448.1 uncharacterized protein LOC101211284 [Cucumis sativus]3.3e-4695.96Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA
        EKVAPWMSVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSH DENHQLNPTNSNSPT RKSIL YFNCCVKA
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA

XP_008457901.1 PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo]2.4e-4493.94Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA
        EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASS TPTTNTPHS  DEN QLNPTNSNSPT RKSIL YFNCCVKA
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA

XP_023006844.1 uncharacterized protein LOC111499515 [Cucurbita maxima]2.3e-3984.62Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSA-----TPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNC
        EKVAPW+SVPQFGDWEQK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+LMASSA     T TTNT H HA ENHQLN +N+NSPT RKSILSYFNC
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSA-----TPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNC

Query:  CVKA
        CVKA
Subjt:  CVKA

XP_023533301.1 uncharacterized protein LOC111795235 [Cucurbita pepo subsp. pepo]1.1e-3883.65Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNT-----PHSHADENHQLNPTNSNSPTRRKSILSYFNC
        EKVAPW+SVPQFGDWEQK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+LMASSAT TT T      H HA ENHQLN +N+NSPT RKSILSYFNC
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNT-----PHSHADENHQLNPTNSNSPTRRKSILSYFNC

Query:  CVKA
        CVKA
Subjt:  CVKA

XP_038900911.1 uncharacterized protein LOC120087959 [Benincasa hispida]1.4e-4797.98Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA
        EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM SSATPTTNTPHSHADENHQLNPTNSNSPT RKSILSYFNCCVKA
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA

TrEMBL top hitse value%identityAlignment
A0A0A0LJN9 Uncharacterized protein1.6e-4695.96Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA
        EKVAPWMSVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSH DENHQLNPTNSNSPT RKSIL YFNCCVKA
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA

A0A1S3C6Q7 uncharacterized protein LOC1034974741.2e-4493.94Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA
        EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASS TPTTNTPHS  DEN QLNPTNSNSPT RKSIL YFNCCVKA
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA

A0A6J1DU25 uncharacterized protein LOC1110243732.7e-3381Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL-MASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA
        EKVAPW+SVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL MASS TP+TN    +A  NHQ +P    SPT RKSILSYFNCCVKA
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL-MASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA

A0A6J1G5D0 uncharacterized protein LOC1114510417.2e-3982.86Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNT------PHSHADENHQLNPTNSNSPTRRKSILSYFN
        EKVAPW+SVPQFGDWEQK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+LMASSAT TT T       H HA ENHQLN +N+NSPT RKSILSYFN
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNT------PHSHADENHQLNPTNSNSPTRRKSILSYFN

Query:  CCVKA
        CCVKA
Subjt:  CCVKA

A0A6J1L3A7 uncharacterized protein LOC1114995151.1e-3984.62Show/hide
Query:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSA-----TPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNC
        EKVAPW+SVPQFGDWEQK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+LMASSA     T TTNT H HA ENHQLN +N+NSPT RKSILSYFNC
Subjt:  EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSA-----TPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNC

Query:  CVKA
        CVKA
Subjt:  CVKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown1.4e-2354.72Show/hide
Query:  EKVAPWMSVPQFGDWEQK--GEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM--ASSATPTTNTPHSHADENHQLNPTN---SNSPTRRKSILSYF
        EK  PW+SVPQFGDW+QK  G +PDYS+DF+KIRE RKQ+KRD SRAS+GNEEEL+    SAT T       ++   + +P++    +SP+ R+S+ S F
Subjt:  EKVAPWMSVPQFGDWEQK--GEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM--ASSATPTTNTPHSHADENHQLNPTN---SNSPTRRKSILSYF

Query:  NCCVKA
        NCCVKA
Subjt:  NCCVKA

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein1.8e-1340.21Show/hide
Query:  APWMSVPQFGDWEQKG--EVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVK
        A W  VPQFG W+QKG  +  +YSV FSK R NRKQ+K  +  +S+G+E+ELM S          +H   +H+    + +   ++K IL+Y NCC++
Subjt:  APWMSVPQFGDWEQKG--EVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVK

AT5G64850.1 FUNCTIONS IN: molecular_function unknown1.6e-2253.27Show/hide
Query:  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM--------ASSATP-TTNTPHSHADENHQLNPTNSNSPTRRKSILSY
        K +PW+SVPQFGDW+QKG   DYS+DFSKIRE RK +KRD SRAS+GNEEEL+          +A P    T HS  +  ++ +  + +SP+RR+ I S 
Subjt:  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM--------ASSATP-TTNTPHSHADENHQLNPTNSNSPTRRKSILSY

Query:  FNCCVKA
        FNCCVKA
Subjt:  FNCCVKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGTGGCTCCATGGATGAGTGTTCCACAATTTGGGGATTGGGAACAGAAGGGAGAAGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAATAGAAA
ACAACACAAAAGGGATTTGTCAAGGGCTAGCATTGGGAATGAAGAGGAGCTAATGGCCTCATCAGCCACTCCCACCACAAACACACCTCATTCCCATGCTGATGAAAATC
ATCAACTCAATCCCACCAACAGCAACTCCCCAACGAGAAGGAAGAGCATATTGAGCTACTTCAACTGTTGTGTGAAAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGTGGCTCCATGGATGAGTGTTCCACAATTTGGGGATTGGGAACAGAAGGGAGAAGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAATAGAAA
ACAACACAAAAGGGATTTGTCAAGGGCTAGCATTGGGAATGAAGAGGAGCTAATGGCCTCATCAGCCACTCCCACCACAAACACACCTCATTCCCATGCTGATGAAAATC
ATCAACTCAATCCCACCAACAGCAACTCCCCAACGAGAAGGAAGAGCATATTGAGCTACTTCAACTGTTGTGTGAAAGCATGATCACAAACTCAAATTCACCAATATTGT
TGATTAATGAAGTGATGGTTTCTCTCAAGGTTTTTTTTTCACATTTGGTTTGTAAGTTGTTATAAGAACATAAGAAACTCCTTTAATTGAAGTTAGATAAATATGTAATC
TTCTTTATATCTTTCTCCCAACCCAGTTGTTAATTTACAAAATAAAAAATAAAAAAGGAATGTTTTTCTAAAACTTTTGCAGGTATGTATTTTTAATGTGTTAAAGGTAG
AGAAATTTTCACAGATAGAAAAAATTTCAAACTATTTAC
Protein sequenceShow/hide protein sequence
MEKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA