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Lsi10G006720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G006720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWRKY domain-containing protein
Genome locationchr10:9336487..9337023
RNA-Seq ExpressionLsi10G006720
SyntenyLsi10G006720
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR003657 - WRKY domain
IPR036576 - WRKY domain superfamily
IPR044810 - WRKY transcription factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148451.1 probable WRKY transcription factor 51 [Cucumis sativus]6.7e-5385.23Show/hide
Query:  MASFPYEDSNPNPNP---NYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKI--AGVDSSGSSVVIDSGSSVVV-SSGAST---R
        MASFPYEDSN NPNP   NYTHFPPILDPASFFDFELSDFL+FGDD+N  VDQ ASSSPSMTSSEKI   GVDS GSS VID+GSSVVV SSGAST   R
Subjt:  MASFPYEDSNPNPNP---NYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKI--AGVDSSGSSVVIDSGSSVVV-SSGAST---R

Query:  SKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        SKN E KKR+GEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  SKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

XP_008457906.1 PREDICTED: probable WRKY transcription factor 51 [Cucumis melo]3.3e-5281.53Show/hide
Query:  MASFPYEDSNP-----NPNPN--YTHFPPILDPASFFDFELSDFLVFGDDDNNN----VDQAASSSPSMTSSEKI---AGVDSSGSSVVIDSGSSVVVSS
        MASFPYEDSNP     NPNPN  YT FPPILDPASFFDFELSDFL+F D++NNN    VDQAASSSPSMTSSEKI    GVDSSGSS VID+GSS+VVSS
Subjt:  MASFPYEDSNP-----NPNPN--YTHFPPILDPASFFDFELSDFLVFGDDDNNN----VDQAASSSPSMTSSEKI---AGVDSSGSSVVIDSGSSVVVSS

Query:  GAST---RSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        GAST   RSKN E KKR+GEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  GAST---RSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

XP_022159094.1 probable WRKY transcription factor 51 [Momordica charantia]3.2e-4776.43Show/hide
Query:  MASFPYEDSNPNPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR
        MASFP +D NPNPNPNYTHFPPILDP+ FFDF+LSD+L+  DD+ N  DQAASSSPS+ SSEKI GVDS  S  V+DSGSS V SSGA T S NE  KK+
Subjt:  MASFPYEDSNPNPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR

Query:  EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        E ++GCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

XP_038901292.1 probable WRKY transcription factor 51 isoform X1 [Benincasa hispida]1.9e-5584.67Show/hide
Query:  MASFPYEDSNP--------NPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGAST--
        MASFPYEDSNP        NPNPNYTHFPPILDP+SFFDFE+SDF VF DDDNNNVDQ ASSSPSMTSSEKI  VDS GSS VIDSGSS+VVSSGAST  
Subjt:  MASFPYEDSNP--------NPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGAST--

Query:  RSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        RSKN E KKR+GEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  RSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

XP_038901293.1 probable WRKY transcription factor 51 isoform X2 [Benincasa hispida]1.9e-5584.67Show/hide
Query:  MASFPYEDSNP--------NPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGAST--
        MASFPYEDSNP        NPNPNYTHFPPILDP+SFFDFE+SDF VF DDDNNNVDQ ASSSPSMTSSEKI  VDS GSS VIDSGSS+VVSSGAST  
Subjt:  MASFPYEDSNP--------NPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGAST--

Query:  RSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        RSKN E KKR+GEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  RSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

TrEMBL top hitse value%identityAlignment
A0A0A0LM41 WRKY domain-containing protein9.4e-5384.83Show/hide
Query:  MASFPYEDSNPNPNP---NYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKI--AGVDSSGSSVVIDSGSSVVVSSGASTRSKNE
        MASFPYEDSN NPNP   NYTHFPPILDPASFFDFELSDFL+FGDD+N  VDQ ASSSPSMTSSEKI   GVDS GSS VID+GSSVVVSS +  RSKN 
Subjt:  MASFPYEDSNPNPNP---NYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKI--AGVDSSGSSVVIDSGSSVVVSSGASTRSKNE

Query:  ENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        E KKR+GEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  ENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

A0A1S3C6R2 probable WRKY transcription factor 511.6e-5281.53Show/hide
Query:  MASFPYEDSNP-----NPNPN--YTHFPPILDPASFFDFELSDFLVFGDDDNNN----VDQAASSSPSMTSSEKI---AGVDSSGSSVVIDSGSSVVVSS
        MASFPYEDSNP     NPNPN  YT FPPILDPASFFDFELSDFL+F D++NNN    VDQAASSSPSMTSSEKI    GVDSSGSS VID+GSS+VVSS
Subjt:  MASFPYEDSNP-----NPNPN--YTHFPPILDPASFFDFELSDFLVFGDDDNNN----VDQAASSSPSMTSSEKI---AGVDSSGSSVVIDSGSSVVVSS

Query:  GAST---RSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        GAST   RSKN E KKR+GEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  GAST---RSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

A0A6J1DV80 probable WRKY transcription factor 511.6e-4776.43Show/hide
Query:  MASFPYEDSNPNPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR
        MASFP +D NPNPNPNYTHFPPILDP+ FFDF+LSD+L+  DD+ N  DQAASSSPS+ SSEKI GVDS  S  V+DSGSS V SSGA T S NE  KK+
Subjt:  MASFPYEDSNPNPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR

Query:  EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        E ++GCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

A0A6J1E1D1 probable WRKY transcription factor 511.6e-4776.43Show/hide
Query:  MASFPYEDSNPNPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR
        MASFP +D NPNPNPNYTHFPPILDP+ FFDF+LSD+L+  DD+ N  DQAASSSPS+ SSEKI GVDS  S  V+DSGSS V SSGA T S NE  KK+
Subjt:  MASFPYEDSNPNPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR

Query:  EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        E ++GCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

A0A6J1EIN3 probable WRKY transcription factor 513.3e-4578.87Show/hide
Query:  MASFPYEDSNPNPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSS--GASTRSKNEENK
        MASFPYED NPNPNPN+T F PILDPASFFDF+LS+FLV GDDD + VDQ ASS     SSEKI GVDS GSSV +DSGSS VVSS    S RSKN E +
Subjt:  MASFPYEDSNPNPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSS--GASTRSKNEENK

Query:  KREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        KR+GEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
Subjt:  KREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

SwissProt top hitse value%identityAlignment
Q8VWQ5 Probable WRKY transcription factor 505.6e-1041.8Show/hide
Query:  DPASFFDF---ELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVI---DSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEI
        D  S F+F   +LSD   + DDD  +     + S    +S+ +AG   SGSS      +S S+    +  +T S + +NKK + ++  RVAF+T+SE E+
Subjt:  DPASFFDF---ELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVI---DSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEI

Query:  MDDGYKWRKYGKKSVKNSPNPR
        +DDG+KWRKYGKK VKNSP+PR
Subjt:  MDDGYKWRKYGKKSVKNSPNPR

Q93WU9 Probable WRKY transcription factor 513.5e-1240.88Show/hide
Query:  NPNPNYTHFP------PILDPASFFDFELSDFLVFGDDDNNN--VDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKREGE
        NP+PN+T+F       P +D   F +    D     D+  NN  +++  SS  S+ SSE   G +S G      SGS+  +S   ST   ++E+ + + E
Subjt:  NPNPNYTHFP------PILDPASFFDFELSDFLVFGDDDNNN--VDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKREGE

Query:  MGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
         G RVAFRT+S+ ++MDDG+KWRKYGKKSVKN+ N R
Subjt:  MGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

Q93WV4 WRKY transcription factor 711.4e-0538Show/hide
Query:  NNNVDQAASSSP--SMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR--EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        NN      S+SP  S +S+E     +++  S  ++     +   G S++   ++ KK+  + E   RVAF TKSE + ++DGY+WRKYG+K+VKNSP PR
Subjt:  NNNVDQAASSSP--SMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR--EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

Q9FL26 WRKY transcription factor 81.1e-0541.76Show/hide
Query:  SSSPSMTSSEKIAGVDSS---GSSVVIDSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        S+SPS + ++   G DS        V D G     S       K EE KK       RV+F TK+E + ++DGY+WRKYG+K+VKNSP PR
Subjt:  SSSPSMTSSEKIAGVDSS---GSSVVIDSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

Q9S763 Probable WRKY transcription factor 452.0e-0749.23Show/hide
Query:  IDSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        +D+ +    SS    RSK    KK+E E   R AF+T+S+ +I+DDGY+WRKYG+K+VKN+P PR
Subjt:  IDSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

Arabidopsis top hitse value%identityAlignment
AT1G29860.1 WRKY DNA-binding protein 711.0e-0638Show/hide
Query:  NNNVDQAASSSP--SMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR--EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        NN      S+SP  S +S+E     +++  S  ++     +   G S++   ++ KK+  + E   RVAF TKSE + ++DGY+WRKYG+K+VKNSP PR
Subjt:  NNNVDQAASSSP--SMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKR--EGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

AT3G01970.1 WRKY DNA-binding protein 451.4e-0849.23Show/hide
Query:  IDSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        +D+ +    SS    RSK    KK+E E   R AF+T+S+ +I+DDGY+WRKYG+K+VKN+P PR
Subjt:  IDSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

AT5G26170.1 WRKY DNA-binding protein 504.0e-1141.8Show/hide
Query:  DPASFFDF---ELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVI---DSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEI
        D  S F+F   +LSD   + DDD  +     + S    +S+ +AG   SGSS      +S S+    +  +T S + +NKK + ++  RVAF+T+SE E+
Subjt:  DPASFFDF---ELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVI---DSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEI

Query:  MDDGYKWRKYGKKSVKNSPNPR
        +DDG+KWRKYGKK VKNSP+PR
Subjt:  MDDGYKWRKYGKKSVKNSPNPR

AT5G46350.1 WRKY DNA-binding protein 87.7e-0741.76Show/hide
Query:  SSSPSMTSSEKIAGVDSS---GSSVVIDSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
        S+SPS + ++   G DS        V D G     S       K EE KK       RV+F TK+E + ++DGY+WRKYG+K+VKNSP PR
Subjt:  SSSPSMTSSEKIAGVDSS---GSSVVIDSGSSVVVSSGASTRSKNEENKKREGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR

AT5G64810.1 WRKY DNA-binding protein 512.5e-1340.88Show/hide
Query:  NPNPNYTHFP------PILDPASFFDFELSDFLVFGDDDNNN--VDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKREGE
        NP+PN+T+F       P +D   F +    D     D+  NN  +++  SS  S+ SSE   G +S G      SGS+  +S   ST   ++E+ + + E
Subjt:  NPNPNYTHFP------PILDPASFFDFELSDFLVFGDDDNNN--VDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKREGE

Query:  MGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR
         G RVAFRT+S+ ++MDDG+KWRKYGKKSVKN+ N R
Subjt:  MGCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCTTCCCTTATGAAGATTCAAACCCTAACCCTAACCCTAATTACACTCATTTTCCTCCGATTCTCGACCCCGCTTCCTTCTTCGATTTCGAGCTCTCC
GATTTCCTCGTGTTCGGCGATGACGACAACAATAACGTCGACCAAGCCGCATCGTCCTCTCCGAGTATGACTTCGTCGGAAAAGATCGCTGGAGTCGATAGTAGT
GGCAGCTCTGTTGTAATCGATAGCGGATCTAGCGTAGTAGTTTCATCGGGAGCGTCAACAAGAAGCAAAAATGAAGAGAATAAGAAAAGGGAGGGAGAAATGGGG
TGTAGGGTTGCATTCAGAACCAAATCAGAGCAAGAGATTATGGATGATGGCTACAAGTGGAGGAAATATGGGAAAAAGTCTGTGAAAAACAGTCCAAATCCCAGG
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCTTCCCTTATGAAGATTCAAACCCTAACCCTAACCCTAATTACACTCATTTTCCTCCGATTCTCGACCCCGCTTCCTTCTTCGATTTCGAGCTCTCC
GATTTCCTCGTGTTCGGCGATGACGACAACAATAACGTCGACCAAGCCGCATCGTCCTCTCCGAGTATGACTTCGTCGGAAAAGATCGCTGGAGTCGATAGTAGT
GGCAGCTCTGTTGTAATCGATAGCGGATCTAGCGTAGTAGTTTCATCGGGAGCGTCAACAAGAAGCAAAAATGAAGAGAATAAGAAAAGGGAGGGAGAAATGGGG
TGTAGGGTTGCATTCAGAACCAAATCAGAGCAAGAGATTATGGATGATGGCTACAAGTGGAGGAAATATGGGAAAAAGTCTGTGAAAAACAGTCCAAATCCCAGG
TAA
Protein sequenceShow/hide protein sequence
MASFPYEDSNPNPNPNYTHFPPILDPASFFDFELSDFLVFGDDDNNNVDQAASSSPSMTSSEKIAGVDSSGSSVVIDSGSSVVVSSGASTRSKNEENKKREGEMG
CRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPR