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Lsi10G007110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUPF0235 protein C15orf40 homolog
Genome locationchr10:9946389..9948698
RNA-Seq ExpressionLsi10G007110
SyntenyLsi10G007110
Gene Ontology termsNA
InterPro domainsIPR003746 - Protein of unknown function DUF167
IPR036591 - YggU-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151587.1 uncharacterized protein LOC101218498 [Cucumis sativus]2.4e-5796.09Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        MPP KKGKTKAPKATESIQS VK+NNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMS VLGVKRRQVSIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALTCE
        KSRGKVVIVE+VSLQSVFDALNKALTCE
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALTCE

XP_008460904.1 PREDICTED: UPF0235 protein LHK_03181 [Cucumis melo]2.4e-5796.88Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        MPP KKGKTKAPKATESIQS VKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDF DDALGVQIDAPAKDGEANAALLDYMS VLGVKRRQVSIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALTCE
        KSRGKVVIVEEVSLQSVFDALNKALTCE
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALTCE

XP_022143592.1 uncharacterized protein LOC111013451 [Momordica charantia]5.2e-5290.62Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        MPP KKGKTKAPKATESIQS    N +PSCLRSV+PSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDY+S VLGVKRRQVSIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALTCE
        KSR KVVIVEEVSLQ+VFDALNKALTCE
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALTCE

XP_022971730.1 UPF0235 protein C15orf40 homolog [Cucurbita maxima]2.3e-5292.06Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        M P KKGKTKAPKATESIQS +K NNYPSCLRSVS SS+AITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMS VLGVKRRQ+SIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALT
        KSR KVVIVEEVSLQSVFDALNKALT
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALT

XP_038902101.1 UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida]4.5e-5695.31Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        MPP KKGKTKA KATESIQS VKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMS VLGVKRRQ+SIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALTCE
        KSR KVVIVEEVSLQSVFDALNKALTCE
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALTCE

TrEMBL top hitse value%identityAlignment
A0A0A0LMY2 Uncharacterized protein1.2e-5796.09Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        MPP KKGKTKAPKATESIQS VK+NNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMS VLGVKRRQVSIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALTCE
        KSRGKVVIVE+VSLQSVFDALNKALTCE
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALTCE

A0A1S3CDI8 UPF0235 protein LHK_031811.2e-5796.88Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        MPP KKGKTKAPKATESIQS VKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDF DDALGVQIDAPAKDGEANAALLDYMS VLGVKRRQVSIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALTCE
        KSRGKVVIVEEVSLQSVFDALNKALTCE
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALTCE

A0A6J1CR98 uncharacterized protein LOC1110134512.5e-5290.62Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        MPP KKGKTKAPKATESIQS    N +PSCLRSV+PSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDY+S VLGVKRRQVSIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALTCE
        KSR KVVIVEEVSLQ+VFDALNKALTCE
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALTCE

A0A6J1EMK4 uncharacterized protein LOC1114348896.2e-5190.48Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        M P KKGKTKA K TES +S +KTNNYPSCLRSVS SSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMS VLGVKRRQ+SIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALT
        KSR KVVIVEEVSLQSVFDALNKALT
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALT

A0A6J1I6J5 UPF0235 protein C15orf40 homolog1.1e-5292.06Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        M P KKGKTKAPKATESIQS +K NNYPSCLRSVS SS+AITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMS VLGVKRRQ+SIGSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKALT
        KSR KVVIVEEVSLQSVFDALNKALT
Subjt:  KSRGKVVIVEEVSLQSVFDALNKALT

SwissProt top hitse value%identityAlignment
Q3ZBP8 UPF0235 protein C15orf40 homolog2.3e-1043.02Show/hide
Query:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGKVV-IVEEVSLQSVFDALNK
        V+I IHAKPGSK  ++TD   +A+ V I AP  +GEANA L  Y+S VL +++  V +  G KSR KVV ++     + + + L K
Subjt:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGKVV-IVEEVSLQSVFDALNK

Q505I4 UPF0235 protein C15orf40 homolog7.1e-1243.14Show/hide
Query:  KGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGK
        K +TK P+       PV T+         S   V I IHAKPGSK  ++TD   +A+GV I AP  +GEANA L  Y+S VL +++  V +  G KSR K
Subjt:  KGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGK

Query:  VV
        VV
Subjt:  VV

Q54UW1 UPF0235 protein1.3e-0828.8Show/hide
Query:  KKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRG
        KKG + + K  +  Q  +  NN       V    + I ++  P SK +SI  F D  L ++I  P  DG+AN  +++++S  L +++  + +G GSKSR 
Subjt:  KKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRG

Query:  KVVIV----EEVSLQSVFDALNKAL
        K V +    E ++   +F+ +   L
Subjt:  KVVIV----EEVSLQSVFDALNKAL

Q8WUR7 UPF0235 protein C15orf405.6e-0936Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSS-VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSG
        MP      TK    ++  + P+     P    +V P   V I IHAKPGSK  ++TD   +A+ V I AP  +GEANA L  Y+S VL +++  V +  G
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSS-VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSG

Query:  SKSRGKVV-IVEEVSLQSVFDALNK
         KSR KVV ++   + + + + L K
Subjt:  SKSRGKVV-IVEEVSLQSVFDALNK

Q9CRC3 UPF0235 protein C15orf40 homolog2.7e-1141.18Show/hide
Query:  KGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGK
        K +TK P+       PV T+             V I IHAKPGS+  ++TD   +A+GV I AP  +GEANA L  Y+S VL +++  V +  G KSR K
Subjt:  KGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGK

Query:  VV
        VV
Subjt:  VV

Arabidopsis top hitse value%identityAlignment
AT1G49170.1 Protein of unknown function (DUF167)4.5e-3869.35Show/hide
Query:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS
        M P KKGK K   A ES  +  +++++P+CLR ++PSSVAITIHAKPGSK ASITD  D+A+GVQIDAPA+DGEANAALL+YMS VLGVKRRQVS+GSGS
Subjt:  MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGS

Query:  KSRGKVVIVEEVSLQSVFDALNKA
        KSR KVVIVE+++ QSVF AL++A
Subjt:  KSRGKVVIVEEVSLQSVFDALNKA

AT5G63440.2 Protein of unknown function (DUF167)1.5e-0931.63Show/hide
Query:  PSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDALNKAL
        P C+  +    V + I  +  ++ ++IT    D + V + APA  GEAN  LL++M  VLG++  Q+++  G  S+ K+++VE++S + V++ L +A+
Subjt:  PSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDALNKAL

AT5G63440.3 Protein of unknown function (DUF167)1.5e-0931.63Show/hide
Query:  PSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDALNKAL
        P C+  +    V + I  +  ++ ++IT    D + V + APA  GEAN  LL++M  VLG++  Q+++  G  S+ K+++VE++S + V++ L +A+
Subjt:  PSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDALNKAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCGCCGAAGAAGGGGAAAACGAAAGCGCCGAAAGCTACTGAATCAATTCAATCGCCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTC
TTCCGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCACCGGCCAAAGATGGAG
AAGCTAATGCTGCTCTTCTTGATTACATGAGTTATGTTTTAGGTGTCAAAAGAAGACAAGTATCTATAGGTTCTGGCTCTAAATCAAGAGGCAAGGTTGTGATCGTGGAG
GAGGTTAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCTTTAACATGTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTCGTTCCGTCTCGATATTACATTCCAATACTTGTTTGATTTTTAATAATACTTATTATATTCTAACCTCCCAGAAACCTCGTTGTTACGACAGTTAATCCTTTGAG
TGAGCCTAAATTTAAACAAAACTCTACCAGCGCTAGCAAAATCCCGTTTGATTTGGGAAAGAAAATGCCTCCGCCGAAGAAGGGGAAAACGAAAGCGCCGAAAGCTACTG
AATCAATTCAATCGCCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCC
TCTATCACAGACTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCACCGGCCAAAGATGGAGAAGCTAATGCTGCTCTTCTTGATTACATGAGTTATGTTTTAGGTGT
CAAAAGAAGACAAGTATCTATAGGTTCTGGCTCTAAATCAAGAGGCAAGGTTGTGATCGTGGAGGAGGTTAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCTTTAA
CATGTGAGTGATTCTATGGGCTCTTTGGAAGTTTACACCCTTTAACGGAATATCAGCATACTGTAATAAGTACAGGTGGATTAACTACTATCTTGCTGCCGGAACATTCA
AAGTAATACAGCTAGATGTAACTCTGATTTGTTTATATTTGATCTAAATCTCAACCATATTTTTCATGTTGTGTATATTTGTAGAGTTTCAACTTATGGTAGTGAGCCAA
GGTATGATAACCTGACTGCTAGCCTTATATACTTCTGCAAATATGAGTTTTCATTGAAATTGAAATGCCCGTCTCAACATGAAGTGATTAATCTTGTTCAATTGGTTGAT
TCTTTTACCATTTAATGTTTTTAATTTTTGCTAAGTTGATCATGGCTCAACTAGTTTAAAC
Protein sequenceShow/hide protein sequence
MPPPKKGKTKAPKATESIQSPVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSYVLGVKRRQVSIGSGSKSRGKVVIVE
EVSLQSVFDALNKALTCE