; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G007120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosome assembly factor mrt4
Genome locationchr10:9968871..9981026
RNA-Seq ExpressionLsi10G007120
SyntenyLsi10G007120
Gene Ontology termsGO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0000027 - ribosomal large subunit assembly (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0006412 - translation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0016740 - transferase activity (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR043164 - 50S ribosomal protein L10, insertion domain superfamily
IPR043141 - Ribosomal protein L10-like domain superfamily
IPR040637 - 60S ribosomal protein L10P, insertion domain
IPR033867 - Ribosome assembly factor Mrt4
IPR022671 - Ribosomal protein L2, conserved site
IPR022669 - Ribosomal protein L2, C-terminal
IPR014726 - Ribosomal protein L2, domain 3
IPR014722 - Ribosomal protein L2, domain 2
IPR008991 - Translation protein SH3-like domain superfamily
IPR005880 - Ribosomal protein L2, bacterial/organellar-type
IPR001790 - Ribosomal protein L10P


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157470.1 mRNA turnover protein 4 homolog [Momordica charantia]9.8e-11593.33Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLKS+SRLFFGANKVMQVSLGR+ SDEI+PGL+K+SKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEY DYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEGK+LSPESAGILRALGIRMA+
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSD
        FRLNLVCRWSPGDF+LYI+G DNSD
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSD

XP_022933518.1 mRNA turnover protein 4 homolog [Cucurbita moschata]2.3e-11997.78Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGR+ASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSD
        FRLNLVCRWSPG+FELYIDGPDNSD
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSD

XP_022969955.1 mRNA turnover protein 4 homolog [Cucurbita maxima]1.9e-11897.33Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGR+ASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSD
        FRLNLVCRWSPG+FELYIDGPD SD
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSD

XP_023529350.1 mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo]6.6e-11997.33Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGR+AS+EIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSD
        FRLNLVCRWSPG+FELYIDGPDNSD
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSD

XP_038902849.1 mRNA turnover protein 4 homolog [Benincasa hispida]6.6e-11997.78Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMV+LIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSAS+EI+PGL+KVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSD
        FRL+LVCRWSPGDFELYIDGPDNSD
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSD

TrEMBL top hitse value%identityAlignment
A0A6J1DT71 Ribosome assembly factor mrt44.8e-11593.33Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLKS+SRLFFGANKVMQVSLGR+ SDEI+PGL+K+SKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEY DYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEGK+LSPESAGILRALGIRMA+
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSD
        FRLNLVCRWSPGDF+LYI+G DNSD
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSD

A0A6J1F4Z2 Ribosome assembly factor mrt41.1e-11997.78Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGR+ASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSD
        FRLNLVCRWSPG+FELYIDGPDNSD
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSD

A0A6J1I1E2 Ribosome assembly factor mrt49.3e-11997.33Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGR+ASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSD
        FRLNLVCRWSPG+FELYIDGPD SD
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSD

A0A6P4AGB2 Ribosome assembly factor mrt44.1e-9879.56Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQAVE+Y+SI+VF  ENMRNLKFKE RE++KS+SR F G+NKVMQVSLGRSA+DE++PG+YKVSKLL G+
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GLCFTNL KEEVERLFNEY DYD+ RTGS ATEKVELKEGPL+QFSHEMEP LRK G+PVRLNKGVVELV+D+VVCEEGK LSPE+A ILR LGI+MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSD
        FRL+L+CRWSP DFELYID P +SD
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSD

A0A6P5T8Z8 Ribosome assembly factor mrt41.2e-9779.46Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQA E+Y+S++VF+ ENMRNLKFKE R+QLKSSSR F G+NKVMQ+SLGRS SDEI+P L+K+SK+LHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GLCFTNLPKEEVERLFNEY +YD+ARTGS ATEKVEL+EGPLEQF+HEMEP LRK G+PVRLNKGVVELVSDF+VC+EGKSLSPESA ILR LGI+MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNS
        FRL+L+ RWSPG+FELY  GPD+S
Subjt:  FRLNLVCRWSPGDFELYIDGPDNS

SwissProt top hitse value%identityAlignment
A4FV84 mRNA turnover protein 4 homolog4.8e-5653.11Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +F+F+V NMRN K K++R   K  SR+FFG NKVM V+LGRS SDE +  L++VSK L G 
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GL FTN  KEEV+  F +Y + DYAR G+ AT  V L  GPLEQF H MEP LR+LGLP  L KGVV L+SD+ VC+EG  L+PE A +L+  G  MA 
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRW
        F++++   W
Subjt:  FRLNLVCRW

P0C8K6 60S ribosomal protein L2, mitochondrial2.8e-4863.7Show/hide
Query:  LDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNPSHGTQKLRKAGQSRWLGR
        LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AG +A+I+K P ++   CLV+LPS  EK IDSRCRATIG VSNP+HG +KLRKAGQSRW GR
Subjt:  LDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNPSHGTQKLRKAGQSRWLGR

Query:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYK
        RP+VRGVAMNPVDHPHGGGEG++K     G+ S +PWGKPTK G++
Subjt:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYK

Q2F969 60S ribosomal protein L2, mitochondrial2.8e-4863.7Show/hide
Query:  LDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNPSHGTQKLRKAGQSRWLGR
        LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AG +A+I+K P ++   CLV+LPS  EK IDSRCRATIG VSNP+HG +KLRKAGQSRW GR
Subjt:  LDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNPSHGTQKLRKAGQSRWLGR

Query:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYK
        RP+VRGVAMNPVDHPHGGGEG++K     G+ S +PWGKPTK G++
Subjt:  RPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYK

Q9D0I8 mRNA turnover protein 4 homolog1.6e-5452.63Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +F+F+V NMRN K K++R   K  SR+FFG NKVM V+LGRS SDE +  L++VSK L G 
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GL FTN  KEEV   F +Y + D+AR G+ AT  V L  GPL+QF H MEP LR+LGLP  L KGVV L+SD+ VC+EG  L+PE A IL+  G  MA 
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRW
        F++ +   W
Subjt:  FRLNLVCRW

Q9UKD2 mRNA turnover protein 4 homolog9.1e-5552.15Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +F+F+V NMRN K K++R   K  SR+FFG NKVM V+LGRS SDE +  L++VSK L G 
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GL FTN  KEEV   F +Y + DYAR G+ A   V L  GPLEQF H MEP LR+LGLP  L +GVV L+SD+ VC+EG  L+PE A +L+  G  MA 
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRW
        F++ +   W
Subjt:  FRLNLVCRW

Arabidopsis top hitse value%identityAlignment
AT1G25260.1 Ribosomal protein L10 family protein1.1e-8771.89Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHK+ +V+ IR+AVE Y+S++VF+ ENMRN+KFKE R+Q + + + F G+NKVMQV+LGRSA DE++ G+YKVSKLL G+
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGL  T++PKEEVE LFN Y D D++RTGS A E VELKEGPLEQF+HEMEP LRKL +PVRLNKG VELV+DFVVCEEGK LSP+SA ILR L ++MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELY
        F+LNL+CRWSP DFELY
Subjt:  FRLNLVCRWSPGDFELY

AT2G44065.1 Ribosomal protein L2 family5.7e-6067.63Show/hide
Query:  AGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNP
        A T  ++   +M   M  +DINS IGS MPL  MRIGTIIHNIEMNPGQG K+VR+AG  A+ILK P AK + CL+KLPS + KWI+++CRATIG VSNP
Subjt:  AGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNP

Query:  SHGTQKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYKTRSLRRKKQ
        SHGT+KL KAGQSRWLG RP VRGVAMNP DHPHGGGEGKSKSSGS G+ S +PWGKP K GYK+ S+++KK+
Subjt:  SHGTQKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYKTRSLRRKKQ

AT2G44065.2 Ribosomal protein L2 family5.7e-6067.63Show/hide
Query:  AGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNP
        A T  ++   +M   M  +DINS IGS MPL  MRIGTIIHNIEMNPGQG K+VR+AG  A+ILK P AK + CL+KLPS + KWI+++CRATIG VSNP
Subjt:  AGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNP

Query:  SHGTQKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYKTRSLRRKKQ
        SHGT+KL KAGQSRWLG RP VRGVAMNP DHPHGGGEGKSKSSGS G+ S +PWGKP K GYK+ S+++KK+
Subjt:  SHGTQKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYKTRSLRRKKQ

ATCG00830.1 ribosomal protein L28.0e-3048.37Show/hide
Query:  DINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNPSHGTQKLRKAGQSRWLGRR
        ++  ++G+ +PL+ M +GT IHNIE+  G+GG+L R+AGA A+++   E KS    +KLPS E + I   C AT+GQV N     + L +AG   WLG+R
Subjt:  DINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNPSHGTQKLRKAGQSRWLGRR

Query:  PVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYKTRSLRRKK
        PVVRGV MNPVDHPHGGGEG++       K   TPWG P   G +TR  +RKK
Subjt:  PVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYKTRSLRRKK

ATCG01310.1 ribosomal protein L28.0e-3048.37Show/hide
Query:  DINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNPSHGTQKLRKAGQSRWLGRR
        ++  ++G+ +PL+ M +GT IHNIE+  G+GG+L R+AGA A+++   E KS    +KLPS E + I   C AT+GQV N     + L +AG   WLG+R
Subjt:  DINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNPSHGTQKLRKAGQSRWLGRR

Query:  PVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYKTRSLRRKK
        PVVRGV MNPVDHPHGGGEG++       K   TPWG P   G +TR  +RKK
Subjt:  PVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYKTRSLRRKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAGTCGAAGCGCGATAGACCAGTTACTTTATCAAAAACCAAGAAGAAAGGAAGGGAACACAAGAAATCAATGGTGGATCTGATCAGGCAGGCTGTGGAAAATTA
CAACTCAATTTTTGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTTAAGGAACTCAGGGAGCAGCTGAAGTCATCTAGCAGATTGTTTTTTGGAGCAAACAAAGTCA
TGCAAGTTTCTCTCGGTCGAAGTGCTTCCGATGAGATTCAACCAGGCCTGTACAAGGTTTCCAAGCTTCTGCATGGAAATACTGGACTTTGTTTCACAAACTTACCAAAA
GAAGAGGTTGAGAGGTTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGCAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAG
CCATGAGATGGAGCCTTCTCTACGGAAGCTTGGGTTGCCGGTTCGTTTGAATAAGGGTGTGGTGGAACTTGTATCAGACTTCGTTGTATGTGAGGAGGGCAAGTCTCTAT
CACCGGAGTCAGCTGGCATATTGCGTGCGTTGGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTCTGCAGATGGAGCCCCGGCGACTTTGAACTTTACATCGATGGA
CCAGATAATTCTGATAGTCGTATACTTCCTCTTCGTCACTGGATCTGGGGAGCAGTAGCAGCCGAAAGCCATAAAACCCTCGCCGGCCGCCGTAATTCTCTTTGCTTCCT
TCTCACCACCATCAACATCTTCTTTGAGAAAACCAAATACCTGGACTCATTCCCTTTCGCACTGCTTCAATCGGAAGTCATGGCTATGAGATCCGCGCCCGCGGTTGCTC
TTCGGGGCCTCAGGAGATCTTCTCTCTCACTCTTCGCTGAGCTCTCTGCGATTGATCACCCTTCCTCATTCATCTTCTACCTACCATATATAGCTGGGACATACGGTCGG
ACGTTTCGTGAACGAATGACAAATTACATGGCTACCCTCGACATCAATTCACAAATTGGAAGCTGCATGCCGCTTTCGGCAATGCGCATTGGTACGATTATCCACAATAT
CGAGATGAATCCAGGTCAAGGCGGGAAGCTCGTGCGGTCAGCGGGAGCATTTGCAAGGATATTAAAACTGCCAGAGGCAAAGTCAAGATACTGCTTGGTGAAACTCCCTT
CACGTGAAGAGAAGTGGATTGATTCTAGGTGCAGGGCAACAATCGGTCAGGTGTCTAACCCGAGCCATGGAACGCAGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTG
GGTCGGCGACCGGTGGTTCGAGGAGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGAGAGGGTAAGAGCAAGAGTAGTGGAAGCTATGGAAAGGGGTCTCGCAC
ACCCTGGGGGAAGCCAACTAAGTGTGGTTACAAGACTCGATCTCTCAGGCGCAAGAAACAAGTATAA
mRNA sequenceShow/hide mRNA sequence
CAAAAAAAAAATGAACGTAAACCCTAGACCCAAAATCTTCTTCTCTATTTCTCCCCTCGCTTCCCTGCGGCAGACATAGCCAACTCTGCAACCATATTTGATTTCTTTCT
TCTCCCTTCTCCCTCTCCATCGCTGCCATTATCGCTCGCTGGTACACCACCACACTCACTTTTCTTTCTTCTCCTCTTATCTCCCTTCCTACTGCAACCTCACGCTGCCA
CGCCAACCTGCAAAACTCCATCTCAAGGTCTGTATCAAGTTTTTTTCTTTTTTTTGCAGCAATAAAAGATGCCCAAGTCGAAGCGCGATAGACCAGTTACTTTATCAAAA
ACCAAGAAGAAAGGAAGGGAACACAAGAAATCAATGGTGGATCTGATCAGGCAGGCTGTGGAAAATTACAACTCAATTTTTGTTTTCACTGTTGAGAACATGAGAAACCT
CAAGTTTAAGGAACTCAGGGAGCAGCTGAAGTCATCTAGCAGATTGTTTTTTGGAGCAAACAAAGTCATGCAAGTTTCTCTCGGTCGAAGTGCTTCCGATGAGATTCAAC
CAGGCCTGTACAAGGTTTCCAAGCTTCTGCATGGAAATACTGGACTTTGTTTCACAAACTTACCAAAAGAAGAGGTTGAGAGGTTATTTAACGAGTATGTGGATTATGAT
TATGCAAGGACTGGAAGTGCAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGGTTGCCGGT
TCGTTTGAATAAGGGTGTGGTGGAACTTGTATCAGACTTCGTTGTATGTGAGGAGGGCAAGTCTCTATCACCGGAGTCAGCTGGCATATTGCGTGCGTTGGGGATAAGGA
TGGCAACTTTTCGGCTGAATTTGGTCTGCAGATGGAGCCCCGGCGACTTTGAACTTTACATCGATGGACCAGATAATTCTGATAGTCGTATACTTCCTCTTCGTCACTGG
ATCTGGGGAGCAGTAGCAGCCGAAAGCCATAAAACCCTCGCCGGCCGCCGTAATTCTCTTTGCTTCCTTCTCACCACCATCAACATCTTCTTTGAGAAAACCAAATACCT
GGACTCATTCCCTTTCGCACTGCTTCAATCGGAAGTCATGGCTATGAGATCCGCGCCCGCGGTTGCTCTTCGGGGCCTCAGGAGATCTTCTCTCTCACTCTTCGCTGAGC
TCTCTGCGATTGATCACCCTTCCTCATTCATCTTCTACCTACCATATATAGCTGGGACATACGGTCGGACGTTTCGTGAACGAATGACAAATTACATGGCTACCCTCGAC
ATCAATTCACAAATTGGAAGCTGCATGCCGCTTTCGGCAATGCGCATTGGTACGATTATCCACAATATCGAGATGAATCCAGGTCAAGGCGGGAAGCTCGTGCGGTCAGC
GGGAGCATTTGCAAGGATATTAAAACTGCCAGAGGCAAAGTCAAGATACTGCTTGGTGAAACTCCCTTCACGTGAAGAGAAGTGGATTGATTCTAGGTGCAGGGCAACAA
TCGGTCAGGTGTCTAACCCGAGCCATGGAACGCAGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGGCGACCGGTGGTTCGAGGAGTGGCGATGAACCCGGTG
GATCATCCTCATGGAGGAGGAGAGGGTAAGAGCAAGAGTAGTGGAAGCTATGGAAAGGGGTCTCGCACACCCTGGGGGAAGCCAACTAAGTGTGGTTACAAGACTCGATC
TCTCAGGCGCAAGAAACAAGTATAA
Protein sequenceShow/hide protein sequence
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNTGLCFTNLPK
EEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDG
PDNSDSRILPLRHWIWGAVAAESHKTLAGRRNSLCFLLTTINIFFEKTKYLDSFPFALLQSEVMAMRSAPAVALRGLRRSSLSLFAELSAIDHPSSFIFYLPYIAGTYGR
TFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGAFARILKLPEAKSRYCLVKLPSREEKWIDSRCRATIGQVSNPSHGTQKLRKAGQSRWL
GRRPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKGSRTPWGKPTKCGYKTRSLRRKKQV