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Lsi10G007170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionXylosyltransferase 1-like
Genome locationchr10:10026262..10026771
RNA-Seq ExpressionLsi10G007170
SyntenyLsi10G007170
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022952614.1 uncharacterized protein LOC111455246 [Cucurbita moschata]2.5e-3065.79Show/hide
Query:  MKSINSLLSTSSTSTNSAPFLFPS-TPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSD
        M SINSLLS    ST+SAP LFP  +P  HR RR P   TV  S   +E AD+N+YYA GK+VDESMIVLRKRIHEIK AEQ+H+P   W DWEKR YS+
Subjt:  MKSINSLLSTSSTSTNSAPFLFPS-TPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSD

Query:  YDSYICEALGYLQT
        YDS ICEALGYLQ+
Subjt:  YDSYICEALGYLQT

XP_022989988.1 uncharacterized protein LOC111487016 [Cucurbita maxima]4.3e-3065.79Show/hide
Query:  MKSINSLLSTSSTSTNSAPFLFPS-TPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSD
        M SINSLLS    ST+SAP LFP  +P  HR RR P   TV  S   +E AD+N+YYA GK+VDESMIVLRKRIHEIK AEQ+H+P   W DWEKR YS+
Subjt:  MKSINSLLSTSSTSTNSAPFLFPS-TPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSD

Query:  YDSYICEALGYLQT
        YDS ICEALGYLQ+
Subjt:  YDSYICEALGYLQT

XP_022993164.1 uncharacterized protein LOC111489262 [Cucurbita maxima]4.8e-2965.74Show/hide
Query:  SSTSTNSAPFL--FPSTPPGHRGRRLPVIVTVVWSR---SSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYIC
        S +S NSAPFL   P +P   R RRLP+   +  SR   SS    +NNNYYASGK+VDESMIVLRKRIHEIK+ EQSH P + WLDWEKR YSDYDS+IC
Subjt:  SSTSTNSAPFL--FPSTPPGHRGRRLPVIVTVVWSR---SSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYIC

Query:  EALGYLQT
        EALGYLQ+
Subjt:  EALGYLQT

XP_023553368.1 uncharacterized protein LOC111810800 [Cucurbita pepo subsp. pepo]8.2e-2964.35Show/hide
Query:  MKSINSLLSTSSTSTNSAPFLFPSTPPG--HRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYS
        M SINSLLS    ST+SAP LFP   P    R RR P   TV  S   +E AD+N+YYA GK+VDESMIVLRKRIHEIK AEQ+H+P   W DWEKR YS
Subjt:  MKSINSLLSTSSTSTNSAPFLFPSTPPG--HRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYS

Query:  DYDSYICEALGYLQT
        +YDS ICEALGYLQ+
Subjt:  DYDSYICEALGYLQT

XP_038875502.1 uncharacterized protein LOC120067929 [Benincasa hispida]2.8e-3768.09Show/hide
Query:  MKSINSLLSTSSTSTNSAPFLFPSTPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDY
        MKSINS L  S +STNSAPFLFPST   HR RRLP+ VTV  S  S    +NNNYYASGKVVDESMIVLRKRIHEIK+AEQSH P A WLDWEKRYYSDY
Subjt:  MKSINSLLSTSSTSTNSAPFLFPSTPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDY

Query:  DSYICEALGYLQTPAQES-PWECSSLLLSAFCSPPPSFSTA
        DS+ICEALGYLQT    + P     +LL    S P  FS+A
Subjt:  DSYICEALGYLQTPAQES-PWECSSLLLSAFCSPPPSFSTA

TrEMBL top hitse value%identityAlignment
A0A5A7TY46 Uncharacterized protein3.1e-2658.22Show/hide
Query:  MKSINSLLSTSSTSTNSAPFLFPSTPPGHRGRRLPVIVTVVWSRSSRE-AADNNN--------YYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLD
        MKSINSL    S ST S  F   S  P   GRR P+    V  R+SRE AADNNN        YYA GKVVDESMIVLRKRIHEIK+AEQ   P A WLD
Subjt:  MKSINSLLSTSSTSTNSAPFLFPSTPPGHRGRRLPVIVTVVWSRSSRE-AADNNN--------YYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLD

Query:  WEKRYYSDYDSYICEALGYLQTPAQES-PWECSSLLLSAFCSPPPS
        WEKRYYSDYDS+ICEALGYLQ+    + P     +LL    S P S
Subjt:  WEKRYYSDYDSYICEALGYLQTPAQES-PWECSSLLLSAFCSPPPS

A0A6J1FMN3 uncharacterized protein LOC1114453384.8e-2762.26Show/hide
Query:  SSTSTNSAPFL--FPSTPPGHRGRRLPVIVTVVWSR-SSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYICEA
        S +S NSAPFL   P +    R RR P+   +  SR +   +++NNNYYASGK+VDESMIVLRKRIHEIK+ E+SH P + WLDWEKR YSDYDS+ICEA
Subjt:  SSTSTNSAPFL--FPSTPPGHRGRRLPVIVTVVWSR-SSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYICEA

Query:  LGYLQT
        LGYLQ+
Subjt:  LGYLQT

A0A6J1GM73 uncharacterized protein LOC1114552461.2e-3065.79Show/hide
Query:  MKSINSLLSTSSTSTNSAPFLFPS-TPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSD
        M SINSLLS    ST+SAP LFP  +P  HR RR P   TV  S   +E AD+N+YYA GK+VDESMIVLRKRIHEIK AEQ+H+P   W DWEKR YS+
Subjt:  MKSINSLLSTSSTSTNSAPFLFPS-TPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSD

Query:  YDSYICEALGYLQT
        YDS ICEALGYLQ+
Subjt:  YDSYICEALGYLQT

A0A6J1JRY7 uncharacterized protein LOC1114870162.1e-3065.79Show/hide
Query:  MKSINSLLSTSSTSTNSAPFLFPS-TPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSD
        M SINSLLS    ST+SAP LFP  +P  HR RR P   TV  S   +E AD+N+YYA GK+VDESMIVLRKRIHEIK AEQ+H+P   W DWEKR YS+
Subjt:  MKSINSLLSTSSTSTNSAPFLFPS-TPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSD

Query:  YDSYICEALGYLQT
        YDS ICEALGYLQ+
Subjt:  YDSYICEALGYLQT

A0A6J1JZG1 uncharacterized protein LOC1114892622.3e-2965.74Show/hide
Query:  SSTSTNSAPFL--FPSTPPGHRGRRLPVIVTVVWSR---SSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYIC
        S +S NSAPFL   P +P   R RRLP+   +  SR   SS    +NNNYYASGK+VDESMIVLRKRIHEIK+ EQSH P + WLDWEKR YSDYDS+IC
Subjt:  SSTSTNSAPFL--FPSTPPGHRGRRLPVIVTVVWSR---SSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYIC

Query:  EALGYLQT
        EALGYLQ+
Subjt:  EALGYLQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15010.1 unknown protein4.9e-1655Show/hide
Query:  NYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYICEALGYLQT
        +YY  G+ VDE+M+VLRKRIHE+K+ E++  P + W+ WEKR+Y +YD+ IC+AL  LQT
Subjt:  NYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYICEALGYLQT

AT2G01300.1 unknown protein4.0e-1845.16Show/hide
Query:  SSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYICEALGYLQTPAQES-PWECSSLLLSAFCSPPPS
        S+  ++  ++YY  G++VDE+MIVLRKRIHE+K+ E+++ P + W+DWEKR+Y+ YDS IC+++G LQ+    S P    + LL    S P S
Subjt:  SSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYICEALGYLQTPAQES-PWECSSLLLSAFCSPPPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCCATTAATTCCCTCCTCTCAACCTCCTCGACCTCCACCAATTCCGCTCCCTTCCTCTTCCCTTCGACTCCCCCCGGCCACCGTGGGCGCCGGCTACCAGTGAT
CGTAACCGTGGTGTGGTCTCGATCGTCACGAGAAGCAGCCGACAACAACAATTACTACGCAAGCGGGAAGGTGGTGGACGAGAGCATGATCGTGCTCCGAAAACGAATCC
ACGAGATCAAGATAGCGGAGCAAAGCCACAATCCGGCTGCCGGTTGGCTTGACTGGGAGAAACGCTACTATTCCGATTATGATTCTTACATCTGTGAGGCTTTAGGCTAC
CTTCAAACACCCGCCCAAGAGTCGCCTTGGGAATGCTCCTCCTTATTACTCTCAGCCTTCTGCTCTCCTCCGCCCTCCTTCTCTACAGCTTCTTCGACATTGCCGCCGCT
CTTCTCGCGGCTTTCTCTCCCTCCTAACACTCAACTCTATGCTCATGCTCGACCATATTTAAAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCCATTAATTCCCTCCTCTCAACCTCCTCGACCTCCACCAATTCCGCTCCCTTCCTCTTCCCTTCGACTCCCCCCGGCCACCGTGGGCGCCGGCTACCAGTGAT
CGTAACCGTGGTGTGGTCTCGATCGTCACGAGAAGCAGCCGACAACAACAATTACTACGCAAGCGGGAAGGTGGTGGACGAGAGCATGATCGTGCTCCGAAAACGAATCC
ACGAGATCAAGATAGCGGAGCAAAGCCACAATCCGGCTGCCGGTTGGCTTGACTGGGAGAAACGCTACTATTCCGATTATGATTCTTACATCTGTGAGGCTTTAGGCTAC
CTTCAAACACCCGCCCAAGAGTCGCCTTGGGAATGCTCCTCCTTATTACTCTCAGCCTTCTGCTCTCCTCCGCCCTCCTTCTCTACAGCTTCTTCGACATTGCCGCCGCT
CTTCTCGCGGCTTTCTCTCCCTCCTAACACTCAACTCTATGCTCATGCTCGACCATATTTAAAAGTTTAA
Protein sequenceShow/hide protein sequence
MKSINSLLSTSSTSTNSAPFLFPSTPPGHRGRRLPVIVTVVWSRSSREAADNNNYYASGKVVDESMIVLRKRIHEIKIAEQSHNPAAGWLDWEKRYYSDYDSYICEALGY
LQTPAQESPWECSSLLLSAFCSPPPSFSTASSTLPPLFSRLSLPPNTQLYAHARPYLKV