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Lsi10G007250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 2
Genome locationchr10:10100903..10101636
RNA-Seq ExpressionLsi10G007250
SyntenyLsi10G007250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605318.1 hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3080Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYVINT++IEEAM+IFTEGL+ VECKAI+D+D  M+N  HEEEVDEL  LY+L DIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF

XP_008460897.1 PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo]9.0e-3585.87Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI--QDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF
        MGSIDRKSSIENEPRTLKM+QIQFAREAALYV+NTTTIEEAMKIFTEGL+PVECKAI  +DKD IM+N+YH+EE+DELQP  QLRDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI--QDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF

XP_011649401.1 uncharacterized protein LOC105434623 [Cucumis sativus]1.2e-3486.96Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI-QDKDLIMENYYHEEEVDE-LQPLYQLRDIVSAPF
        MGSIDRKSSIENEPRTLKMHQIQFAREAALYV+NT TIEEAMKIFTEGLQPVECKAI +DKD I++N+YH+EE+DE LQP YQLRDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI-QDKDLIMENYYHEEEVDE-LQPLYQLRDIVSAPF

XP_023512402.1 uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo]1.3e-3078.02Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKD-LIMENYYHEEEVDELQPLYQLRDIVSAPF
        MG +DRKSSIE EPRTLKM+QIQFAREAALYV+NTT++EEA+KIFTEGL+ VECKAI+D+D  IMEN++HE+E DEL PLYQLRDIV+APF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKD-LIMENYYHEEEVDELQPLYQLRDIVSAPF

XP_038902606.1 uncharacterized protein LOC120089256 [Benincasa hispida]4.3e-3792.22Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF
        MG+IDRKSSIENEPRTL+MHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKD IM NYYHEEE DELQ LYQ RDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ89 Uncharacterized protein5.7e-3586.96Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI-QDKDLIMENYYHEEEVDE-LQPLYQLRDIVSAPF
        MGSIDRKSSIENEPRTLKMHQIQFAREAALYV+NT TIEEAMKIFTEGLQPVECKAI +DKD I++N+YH+EE+DE LQP YQLRDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI-QDKDLIMENYYHEEEVDE-LQPLYQLRDIVSAPF

A0A1R3GDT9 Uncharacterized protein2.7e-1656.52Show/hide
Query:  SIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDK---DLIMENYYHE-EEVDELQPLYQLRDIVSAPF
        +IDRKSSIE+EPRTL  HQIQ AREAA+YV++T +IEEAM IFTEGL+PV   A  D    + +M++   +  E++E Q L++ RD+VSAPF
Subjt:  SIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDK---DLIMENYYHE-EEVDELQPLYQLRDIVSAPF

A0A1S3CDH2 uncharacterized protein LOC1034996384.4e-3585.87Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI--QDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF
        MGSIDRKSSIENEPRTLKM+QIQFAREAALYV+NTTTIEEAMKIFTEGL+PVECKAI  +DKD IM+N+YH+EE+DELQP  QLRDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI--QDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF

A0A6J1DBC1 uncharacterized protein LOC1110189151.4e-2871.74Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKDL--IMENYYHEEEVDELQPLYQLRDIVSAPF
        MG IDRKSSIENEPRTLKMHQIQFAREAALY++NTTTI+EAM+IFTEGL+ VECKA +D+++    +  Y+EEE+ +L+PLY+ RDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKDL--IMENYYHEEEVDELQPLYQLRDIVSAPF

A0A6J1G887 uncharacterized protein LOC1114516481.2e-2977.78Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYVINT++IEEAM+IFTEGL+ VECK I+D+D  M+N  HEEEVDEL   Y+L DIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33467.1 unknown protein6.3e-1042.86Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFT-----EGLQPVE---CKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF
        M  ++R+SSIE EP TL + Q++ ARE ALYV+ T T+EEAM IFT     EGL+  E    + I  KD   ++ Y +E +  + P     DI +APF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFT-----EGLQPVE---CKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF

AT4G33467.2 unknown protein4.8e-1043.3Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFT----EGLQPVE---CKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF
        M  ++R+SSIE EP TL + Q++ ARE ALYV+ T T+EEAM IFT    EGL+  E    + I  KD   ++ Y +E +  + P     DI +APF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFT----EGLQPVE---CKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCATCGATAGAAAATCGTCCATTGAAAATGAGCCAAGGACTCTCAAAATGCATCAAATCCAATTTGCAAGAGAAGCAGCACTTTATGTAATAAACACAACCAC
CATAGAAGAAGCAATGAAGATTTTTACAGAGGGATTACAGCCAGTGGAATGTAAAGCAATTCAAGATAAAGATTTAATAATGGAAAATTACTACCATGAGGAAGAAGTTG
ATGAGTTACAACCTCTGTATCAACTTAGAGACATTGTCTCTGCCCCTTTTTAG
mRNA sequenceShow/hide mRNA sequence
CATTCTCCTCCTCAAAAGGATCTGTTTAAAAGAAAAACAGTTAGAAGCCATTTTCGATCCGTCGTTTCTAGAGTTGTATGTCTGGACGACTTGTCGGAAAAGAAGATTGA
AGAAGAAGGGATAAGGTTGAAGGAAAATAATGGGAAGCATCGATAGAAAATCGTCCATTGAAAATGAGCCAAGGACTCTCAAAATGCATCAAATCCAATTTGCAAGAGAA
GCAGCACTTTATGTAATAAACACAACCACCATAGAAGAAGCAATGAAGATTTTTACAGAGGGATTACAGCCAGTGGAATGTAAAGCAATTCAAGATAAAGATTTAATAAT
GGAAAATTACTACCATGAGGAAGAAGTTGATGAGTTACAACCTCTGTATCAACTTAGAGACATTGTCTCTGCCCCTTTTTAGTCTACC
Protein sequenceShow/hide protein sequence
MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIQDKDLIMENYYHEEEVDELQPLYQLRDIVSAPF