; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G007370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationchr10:10209238..10210316
RNA-Seq ExpressionLsi10G007370
SyntenyLsi10G007370
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040757.1 putative polygalacturonase [Cucumis melo var. makuwa]8.4e-14986.42Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTLNHTRGHLVEL++SHNILISNLTFKNSPFWTIHPVYC               NVV+KDMTILAPLNAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YGINLARPSSNI+IRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGI+IKSDQGRGGYIANVSI+NFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFSRGSNDHP+EQ+DPKAVPKV GIFITN+MS NSTKAPVLDGI GTSYD VCMKNVTIL L PSAKWHCAFVSGFSTSVFPMPCPQ +NTTFS
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
         L
Subjt:  SL

TYK02072.1 putative polygalacturonase [Cucumis melo var. makuwa]8.4e-14986.42Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTLNHTRGHLVEL++SHNILISNLTFKNSPFWTIHPVYC               NVV+KDMTILAPLNAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YGINLARPSSNI+IRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGI+IKSDQGRGGYIANVSI+NFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFSRGSNDHP+EQ+DPKAVPKV GIFITN+MS NSTKAPVLDGI GTSYD VCMKNVTIL L PSAKWHCAFVSGFSTSVFPMPCPQ +NTTFS
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
         L
Subjt:  SL

XP_004147365.1 probable polygalacturonase [Cucumis sativus]3.2e-14886.42Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTLNHTRGHLVEL++SHNILISNLTFKNSPFWTIHPVYC               NVV+KDMTILAPLNAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YGINLARPSSNI+IRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGI+IKSDQGRGGYIANVSI+NFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFSRGSNDHP+EQ+DPKAVPKV GIFITN+MS NSTKAPVL GI GTSYD VCMKNVTIL LTPSAKWHCAFVSGFSTSVFP PCPQ +NTTFS
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
        SL
Subjt:  SL

XP_008460889.1 PREDICTED: probable polygalacturonase [Cucumis melo]8.4e-14986.42Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTLNHTRGHLVEL++SHNILISNLTFKNSPFWTIHPVYC               NVV+KDMTILAPLNAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YGINLARPSSNI+IRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGI+IKSDQGRGGYIANVSI+NFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFSRGSNDHP+EQ+DPKAVPKV GIFITN+MS NSTKAPVLDGI GTSYD VCMKNVTIL L PSAKWHCAFVSGFSTSVFPMPCPQ +NTTFS
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
         L
Subjt:  SL

XP_038900759.1 probable polygalacturonase [Benincasa hispida]7.8e-14784.77Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTLNHTRGHLVEL+ SHNILISNLT KNSPFWTIHPVYC               NVV+KDMTILAPLNAPN D ID DSS N
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YG+NLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLN+WDSAAGI+IKSDQGRGGYIANVSI+NFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFS+GSNDHP+EQWDPKAVPKV GIFITN++S NSTKAPVLDGI+GTSYD VCMKNVTIL L PSAKWHCAF+SGFSTSVFPMPC Q +NTTFS
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
        SL
Subjt:  SL

TrEMBL top hitse value%identityAlignment
A0A0A0LJW9 Uncharacterized protein1.5e-14886.42Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTLNHTRGHLVEL++SHNILISNLTFKNSPFWTIHPVYC               NVV+KDMTILAPLNAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YGINLARPSSNI+IRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGI+IKSDQGRGGYIANVSI+NFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFSRGSNDHP+EQ+DPKAVPKV GIFITN+MS NSTKAPVL GI GTSYD VCMKNVTIL LTPSAKWHCAFVSGFSTSVFP PCPQ +NTTFS
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
        SL
Subjt:  SL

A0A1S3CDX7 probable polygalacturonase4.0e-14986.42Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTLNHTRGHLVEL++SHNILISNLTFKNSPFWTIHPVYC               NVV+KDMTILAPLNAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YGINLARPSSNI+IRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGI+IKSDQGRGGYIANVSI+NFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFSRGSNDHP+EQ+DPKAVPKV GIFITN+MS NSTKAPVLDGI GTSYD VCMKNVTIL L PSAKWHCAFVSGFSTSVFPMPCPQ +NTTFS
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
         L
Subjt:  SL

A0A5A7TGP3 Putative polygalacturonase4.0e-14986.42Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTLNHTRGHLVEL++SHNILISNLTFKNSPFWTIHPVYC               NVV+KDMTILAPLNAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YGINLARPSSNI+IRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGI+IKSDQGRGGYIANVSI+NFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFSRGSNDHP+EQ+DPKAVPKV GIFITN+MS NSTKAPVLDGI GTSYD VCMKNVTIL L PSAKWHCAFVSGFSTSVFPMPCPQ +NTTFS
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
         L
Subjt:  SL

A0A5D3BTE0 Putative polygalacturonase4.0e-14986.42Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTLNHTRGHLVEL++SHNILISNLTFKNSPFWTIHPVYC               NVV+KDMTILAPLNAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YGINLARPSSNI+IRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGI+IKSDQGRGGYIANVSI+NFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFSRGSNDHP+EQ+DPKAVPKV GIFITN+MS NSTKAPVLDGI GTSYD VCMKNVTIL L PSAKWHCAFVSGFSTSVFPMPCPQ +NTTFS
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
         L
Subjt:  SL

A0A6J1G526 probable polygalacturonase2.2e-14280.46Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWW+LWWNRTLNHTRGHL+EL++SHNILISNLT KNSPFWT+HPVYC               NVV+K+MTILAPLNAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        +CIEDCYIES DDLVAVKSGWD+YGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLN+WDSAAG++IKSDQGRGGYIAN+SISNFVMN
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS
        RVKMAIRFS+GSNDHP+E+WDPKAVP V GIFI+N+ S NSTKAPVL+GIEGT +D VCMKNVTIL L PSAKWHCAFVSGFS++VFP PCPQ +N T S
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFS

Query:  SL
        S+
Subjt:  SL

SwissProt top hitse value%identityAlignment
A7PZL3 Probable polygalacturonase2.1e-6242.66Show/hide
Query:  NRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTNV
        N TIDGQG +WW+ +    L +TR +L+ELM S +I ISNLT  NSP W +HPVY R              N++++ +TILAP+ +PN D I+ DS TN 
Subjt:  NRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTNV

Query:  CIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMNR
         IEDCYI S DD VAVKSGWDEYGI    P+  ++IRR++  +P  + + +GSEMSGGI ++  ED+   +S +GI+IK+  GRGGY+ ++ +    M  
Subjt:  CIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMNR

Query:  VKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAK---WHCAFVSGFSTSVFPMPC
        +K A   +     H +  +DPKA P + GI   ++++ N + A  L+GI    +  +C+ NVTI  L   AK   W C  V G S+ V P PC
Subjt:  VKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAK---WHCAFVSGFSTSVFPMPC

P18192 Endo-polygalacturonase6.9e-1329.58Show/hide
Query:  TIDGQGNM--------WWELWWN---RTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDN
        TIDGQG +        WW+L  +   + L      L+++  S N  + N++  NSP          FH     +  S          TI  P  A N D 
Subjt:  TIDGQGNM--------WWELWWN---RTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDN

Query:  IDLDSSTNVCIEDCYIESEDDLVAVKS--GWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIA
        ID  SS N+ I    I + DD VA+K+  G  E        + NI I  +     T  G+ IGSE + G+ N+T++DL +  +  G++IKSD+   G + 
Subjt:  IDLDSSTNVCIEDCYIESEDDLVAVKS--GWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIA

Query:  NVSISNFVMNRVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKW
         V  SN VM  V   I       D   E+ +   VP  + I   ++ S  +    VL+G        V MKNV    LT  + W
Subjt:  NVSISNFVMNRVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKW

P26509 Endo-polygalacturonase5.3e-1329.79Show/hide
Query:  TIDGQGNM--------WWELWWN---RTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDN
        TIDGQG +        WWEL  +   + L      L+++  S N  + N++  NSP          FH     +  S          TI  P  A N D 
Subjt:  TIDGQGNM--------WWELWWN---RTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDN

Query:  IDLDSSTNVCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANV
        ID  SS N+ I    I + DD VA+K+            + NI I  +     T  G+ IGSE + G+ N+T++DL +  +  G++IKSD+   G +  V
Subjt:  IDLDSSTNVCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANV

Query:  SISNFVMNRVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKW
          SN VM  V   I       D   E+ +   VP  + I   +V S  +    VL+G        V MKNV    LT  + W
Subjt:  SISNFVMNRVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKW

P27644 Polygalacturonase2.4e-1329.12Show/hide
Query:  VELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTNVCIEDCYIESEDDLVAVKSGW---DEYG
        + L+S H   +   T +N+  WTIHP  C               ++     TI+AP ++PN D  + +S  NV I        DD +AVK+G    D   
Subjt:  VELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTNVCIEDCYIESEDDLVAVKSGW---DEYG

Query:  INLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSD-QGRGGYIANVSISNFVMNRVKMAI
         +LA  +  I +R      P   G+ IGSEMSGG+ ++T+ED ++  +  G+++K+  +  GG + N+++   +++ V+ A+
Subjt:  INLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSD-QGRGGYIANVSISNFVMNRVKMAI

Q9LW07 Probable polygalacturonase At3g157204.6e-1725.95Show/hide
Query:  IDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTNVCIE
        I+GQG+ WWE         +R   ++  S +N+ +S LT  +SP   IH   C +              V +  + I AP ++PN D ID+ +S+NV I+
Subjt:  IDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTNVCIE

Query:  DCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGG----ISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        DC I + DD +A+ SG           +SNI I  +        G+ IGS    G    + N+ +++ N   +  G +IK+ QG  GY   ++ +   ++
Subjt:  DCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGG----ISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSN--DHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDL---TPS------AKWHCAFVSGFSTSVFP-
         V+  I   +  N  D  N +    +  +V+ +  +N +  + ++     G++    +RV    + + D+   T S      A+  C  V G ST   P 
Subjt:  RVKMAIRFSRGSN--DHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDL---TPS------AKWHCAFVSGFSTSVFP-

Query:  MPCPQFENTTFSSLYL
        + C +     FSS  L
Subjt:  MPCPQFENTTFSSLYL

Arabidopsis top hitse value%identityAlignment
AT3G62110.1 Pectin lyase-like superfamily protein1.9e-8251.66Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG +WW+ + N  LN+TR HLVELM+S  ++ISNLTF NSPFW IHPVYCR              +VVVK++TILAPL +PN D +D DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYI + DDLV++KSGWDEYGI+ ARPSS I I R++G T + SG+ IGSEMSGG+S I I+DL++++S  GI+IK+  GRGGY+ NV I N  ++
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAK--WHCAFVSGFSTSVFP-MPCPQFENT
         VK AIRF+    +HP+E++DPKA+P +  I   NV       A +L+GIEG  +  +C  NVT+     S K  W C+ V G+S  V P + C   + +
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAK--WHCAFVSGFSTSVFP-MPCPQFENT

Query:  TF
         F
Subjt:  TF

AT4G23500.1 Pectin lyase-like superfamily protein8.8e-6442.32Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG  WW  +    L +TR +L+E+M S  I ISNLTF NSP W IHPVY                N+ ++ +TILAP+  PN D I+ DS TN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
          IEDCYI S DD +AVKSGWD+YGIN   P+  ++IRR++  +P  + + +GSEMSGGI ++  ED+   +S +GI+IK+  GRGGY+ +V +    M 
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTI-LDLTP-SAKWHCAFVSGFSTSVFPMPC
         +K     +     HP++ +DPKA+P +  I   ++++ N T    L GI G  +  +C+ NVTI L   P    W+C  VSG+++ V P PC
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTI-LDLTP-SAKWHCAFVSGFSTSVFPMPC

AT4G23820.1 Pectin lyase-like superfamily protein1.2e-7646.86Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        QN TIDGQG +WW +W +RTL +TR +L+E   S  I+ISN+ F+NSPFW IHPVYC               NVV+  +TILAP ++PN D ID DSS N
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIED YI + DDLVA+KSGWD+YGI   RPSSNI IRR++G++P  +G+ IGSE SGGI NI  E + + +   G+ IK++ GRGGYI N+ IS+  ++
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAK-WHCAFVSGFSTSVFPMPCPQFENTTF
          K  I+ +  + DHP+E ++P A+P V GI I NV   N   A  + G++G+ +  +C+  + +     S K W C+ VSG S  V P PC +   T  
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAK-WHCAFVSGFSTSVFPMPCPQFENTTF

Query:  SSL
        S+L
Subjt:  SSL

AT4G33440.1 Pectin lyase-like superfamily protein7.9e-12167.58Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG MWWELWWNRTL HTRGHL+EL +SHNILISNLT  NSPFWTIHPVYC               NVV+++MTILAP+NAPN D ID DSSTN
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIEDCYIES DDLVAVKSGWD+YG+ +ARPSSNI+IRR+SGTT TCSGVGIGSEMSGGI NIT+ED++VWDSAAG++IK+D+GRGGYI+N++ +N ++ 
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQ
        +VK+ IRFS GSNDH +++WDPKA+P+V GI+I+NV+S NS KAP+L G+EGTS+  VC++NVT+L L  + KW C  VSG+++ VFP+ CPQ
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQ

AT5G41870.1 Pectin lyase-like superfamily protein1.2e-7345.64Show/hide
Query:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN
        +N TIDGQG  WW +W + TL  TR  L+E  +S NIL+S++  +NSPFWT+HPVYC               NVVV  +TILAP ++ N D ID DSS+N
Subjt:  QNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTN

Query:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN
        VCIED YI + DDLVAVKSGWDEYGI   RPS +I IRR++G++P  +G+ IGSE SGGI N+T+E++ +++S  GI IK++ GRGG I  ++IS   + 
Subjt:  VCIEDCYIESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMN

Query:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTT
        +V+  I+ S  + DHP+++++  A+P V GI I NV      +A ++ G++ + +  +C  NVT+     S  W C+ V G +  V P PCP+   TT
Subjt:  RVKMAIRFSRGSNDHPNEQWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAGAATAGAACTATTGATGGGCAAGGCAATATGTGGTGGGAGCTTTGGTGGAATAGAACATTAAATCACACAAGGGGCCATCTTGTAGAGCTCATGAGCTCTCA
TAACATTCTCATCTCCAATCTTACTTTCAAAAATTCCCCCTTCTGGACCATCCATCCTGTCTATTGTAGGTTTCATTCTCAATCTAATGCTCTTTGTCATTCTATAGACT
TCAATGTTGTTGTCAAAGACATGACAATCTTGGCTCCGCTCAACGCCCCGAACATAGACAATATCGATCTAGATTCGAGTACCAATGTTTGTATTGAAGATTGTTATATC
GAAAGCGAAGATGATCTAGTAGCAGTGAAGAGTGGATGGGATGAATATGGAATCAACCTTGCACGCCCGAGCTCGAACATCATCATAAGGCGAGTTTCTGGCACCACTCC
AACCTGTTCTGGTGTCGGAATAGGAAGCGAGATGTCGGGTGGAATATCAAACATTACGATCGAGGATTTAAACGTTTGGGATTCGGCAGCTGGCATTCAGATCAAGTCCG
ACCAAGGTAGAGGAGGATATATTGCAAATGTTAGTATAAGTAACTTTGTAATGAACAGAGTGAAAATGGCTATAAGGTTTAGCAGGGGTTCAAATGATCATCCTAATGAA
CAATGGGATCCAAAGGCAGTTCCTAAAGTGAATGGCATTTTCATTACCAATGTCATGAGCTTTAATTCGACGAAGGCTCCGGTTCTCGATGGGATTGAGGGCACGTCGTA
TGATCGTGTATGCATGAAAAATGTCACCATTCTCGATCTCACTCCCTCCGCAAAATGGCATTGTGCTTTTGTCTCAGGTTTTAGCACTTCAGTCTTTCCTATGCCATGCC
CTCAGTTTGAGAACACCACATTTTCGTCGTTGTATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACAGAATAGAACTATTGATGGGCAAGGCAATATGTGGTGGGAGCTTTGGTGGAATAGAACATTAAATCACACAAGGGGCCATCTTGTAGAGCTCATGAGCTCTCA
TAACATTCTCATCTCCAATCTTACTTTCAAAAATTCCCCCTTCTGGACCATCCATCCTGTCTATTGTAGGTTTCATTCTCAATCTAATGCTCTTTGTCATTCTATAGACT
TCAATGTTGTTGTCAAAGACATGACAATCTTGGCTCCGCTCAACGCCCCGAACATAGACAATATCGATCTAGATTCGAGTACCAATGTTTGTATTGAAGATTGTTATATC
GAAAGCGAAGATGATCTAGTAGCAGTGAAGAGTGGATGGGATGAATATGGAATCAACCTTGCACGCCCGAGCTCGAACATCATCATAAGGCGAGTTTCTGGCACCACTCC
AACCTGTTCTGGTGTCGGAATAGGAAGCGAGATGTCGGGTGGAATATCAAACATTACGATCGAGGATTTAAACGTTTGGGATTCGGCAGCTGGCATTCAGATCAAGTCCG
ACCAAGGTAGAGGAGGATATATTGCAAATGTTAGTATAAGTAACTTTGTAATGAACAGAGTGAAAATGGCTATAAGGTTTAGCAGGGGTTCAAATGATCATCCTAATGAA
CAATGGGATCCAAAGGCAGTTCCTAAAGTGAATGGCATTTTCATTACCAATGTCATGAGCTTTAATTCGACGAAGGCTCCGGTTCTCGATGGGATTGAGGGCACGTCGTA
TGATCGTGTATGCATGAAAAATGTCACCATTCTCGATCTCACTCCCTCCGCAAAATGGCATTGTGCTTTTGTCTCAGGTTTTAGCACTTCAGTCTTTCCTATGCCATGCC
CTCAGTTTGAGAACACCACATTTTCGTCGTTGTATTTGTAA
Protein sequenceShow/hide protein sequence
MRQNRTIDGQGNMWWELWWNRTLNHTRGHLVELMSSHNILISNLTFKNSPFWTIHPVYCRFHSQSNALCHSIDFNVVVKDMTILAPLNAPNIDNIDLDSSTNVCIEDCYI
ESEDDLVAVKSGWDEYGINLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIQIKSDQGRGGYIANVSISNFVMNRVKMAIRFSRGSNDHPNE
QWDPKAVPKVNGIFITNVMSFNSTKAPVLDGIEGTSYDRVCMKNVTILDLTPSAKWHCAFVSGFSTSVFPMPCPQFENTTFSSLYL