; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G007510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein
Genome locationchr10:10348135..10348452
RNA-Seq ExpressionLsi10G007510
SyntenyLsi10G007510
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605336.1 hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sororia]6.8e-3480.56Show/hide
Query:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVD
        MET ++KEE+ L+   SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLRQRYEAEQ SAKQSAN   SV+
Subjt:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVD

Query:  KNPSSSKQ
        K   S KQ
Subjt:  KNPSSSKQ

XP_004147347.1 uncharacterized protein LOC101213780 [Cucumis sativus]4.4e-3374.29Show/hide
Query:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNP
        ++  EE  E+KL+   SSSGF GKLE KYREIKENAE YPYVWGSYIVVYGG  LW GYRWRKLRKTEDRVR+LQEKLR+ YEA++SS KQSANSVDK  
Subjt:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNP

Query:  SSSKQ
        + SKQ
Subjt:  SSSKQ

XP_022948157.1 uncharacterized protein LOC111451821 [Cucurbita moschata]6.8e-3480.56Show/hide
Query:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVD
        MET ++KEE+ L+   SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLRQRYEAEQ SAKQSAN   SV+
Subjt:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVD

Query:  KNPSSSKQ
        K   S KQ
Subjt:  KNPSSSKQ

XP_023007268.1 uncharacterized protein LOC111499806 [Cucurbita maxima]5.2e-3481.73Show/hide
Query:  EEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVDKNPS
        ++KEE+ L+   SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQ SAKQSAN   SV+K   
Subjt:  EEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVDKNPS

Query:  SSKQ
        S KQ
Subjt:  SSKQ

XP_038900834.1 uncharacterized protein LOC120087898 [Benincasa hispida]1.5e-4190.48Show/hide
Query:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNP
        +E  EEKEE+KL    SS GFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSV KNP
Subjt:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNP

Query:  SSSKQ
        SSSKQ
Subjt:  SSSKQ

TrEMBL top hitse value%identityAlignment
A0A1S3CCY7 uncharacterized protein LOC1034996204.8e-3378.22Show/hide
Query:  EEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNPSSSK
        EEK  +KL+   SSS F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYRWRKLRKTEDRVR+LQEKLRQ YEAEQSS KQSANSVDKN + SK
Subjt:  EEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNPSSSK

Query:  Q
        Q
Subjt:  Q

A0A5D3BSB4 Uncharacterized protein4.8e-3378.22Show/hide
Query:  EEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNPSSSK
        EEK  +KL+   SSS F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYRWRKLRKTEDRVR+LQEKLRQ YEAEQSS KQSANSVDKN + SK
Subjt:  EEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNPSSSK

Query:  Q
        Q
Subjt:  Q

A0A6J1D6P5 uncharacterized protein LOC1110174444.8e-3376.19Show/hide
Query:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNP
        MET  +KEE++++   +SSGF+GKLE+KYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLR+RYEAEQS++  S  SV+K+P
Subjt:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNP

Query:  SSSKQ
         S KQ
Subjt:  SSSKQ

A0A6J1G8F0 uncharacterized protein LOC1114518213.3e-3480.56Show/hide
Query:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVD
        MET ++KEE+ L+   SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLRQRYEAEQ SAKQSAN   SV+
Subjt:  METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVD

Query:  KNPSSSKQ
        K   S KQ
Subjt:  KNPSSSKQ

A0A6J1L783 uncharacterized protein LOC1114998062.5e-3481.73Show/hide
Query:  EEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVDKNPS
        ++KEE+ L+   SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQ SAKQSAN   SV+K   
Subjt:  EEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSAN---SVDKNPS

Query:  SSKQ
        S KQ
Subjt:  SSKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09270.1 unknown protein3.4e-2356.25Show/hide
Query:  EEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQS--SAKQSANSVDKNPS
        E+++      + GF+G +EE+Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+TEDRVR LQ KLR+  E EQ+  +A +SA SVDK+ S
Subjt:  EEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQS--SAKQSANSVDKNPS

AT5G09270.2 unknown protein3.4e-2356.25Show/hide
Query:  EEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQS--SAKQSANSVDKNPS
        E+++      + GF+G +EE+Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+TEDRVR LQ KLR+  E EQ+  +A +SA SVDK+ S
Subjt:  EEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQS--SAKQSANSVDKNPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTATGGAGGAAAAGGAAGAAGAGAAGTTAAGTAATGGTGGTAGTTCGAGTGGATTTTTGGGTAAATTGGAAGAGAAGTACAGAGAAATCAAAGAGAATGCAGA
AACATATCCTTATGTATGGGGCTCATACATTGTTGTCTATGGCGGATTCGCTCTTTGGACTGGCTATAGATGGAGAAAGCTTCGGAAAACGGAGGACAGAGTACGCGTTT
TACAGGAGAAGCTTCGACAGCGTTATGAAGCAGAACAATCCTCCGCCAAACAATCAGCAAATTCAGTTGATAAAAATCCATCTTCTTCCAAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTATGGAGGAAAAGGAAGAAGAGAAGTTAAGTAATGGTGGTAGTTCGAGTGGATTTTTGGGTAAATTGGAAGAGAAGTACAGAGAAATCAAAGAGAATGCAGA
AACATATCCTTATGTATGGGGCTCATACATTGTTGTCTATGGCGGATTCGCTCTTTGGACTGGCTATAGATGGAGAAAGCTTCGGAAAACGGAGGACAGAGTACGCGTTT
TACAGGAGAAGCTTCGACAGCGTTATGAAGCAGAACAATCCTCCGCCAAACAATCAGCAAATTCAGTTGATAAAAATCCATCTTCTTCCAAGCAGTAG
Protein sequenceShow/hide protein sequence
METMEEKEEEKLSNGGSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVDKNPSSSKQ