; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G007520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:10349803..10350276
RNA-Seq ExpressionLsi10G007520
SyntenyLsi10G007520
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040748.1 hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa]4.3e-5678.98Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSLG G DVG NN      N+NN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
        NNNNNN +SAESPR DVG+R + ED +N DQR+S SSSNNS+ SRESEMPLAITM S
Subjt:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS

KAE8651991.1 hypothetical protein Csa_016945 [Cucumis sativus]1.5e-4870.7Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFW+LTFFYRV+SRACGFRVSLGIG D               
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
                       DVG+R D ED +N DQR S SSSNNS+ SRESEMPLAITM S
Subjt:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS

XP_008460874.1 PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo]7.3e-5678.98Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSLG G DVG NN      N+NN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
        NNNNNN +SAESPR DVG+R + ED +N DQR+S SSSNNS+ SRESEMPLAITM S
Subjt:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS

XP_011649431.1 putative uncharacterized protein DDB_G0284715 [Cucumis sativus]7.8e-5881.53Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFW+LTFFYRV+SRACGFRVSLGIG DV +NNANA      N
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
        NNNNNN +SAES + DVG+R D ED +N DQR S SSSNNS+ SRESEMPLAITM S
Subjt:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS

XP_038900833.1 uncharacterized protein LOC120087896 [Benincasa hispida]7.0e-6789.81Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFW+LTFFYRVISRACGFRVS+GIGVDVGA+NANA      N
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
        NNNNNNNASAESPRHD GDR DEED DNGDQR+S SSSNNS+ASRESEMPLAITMGS
Subjt:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS

TrEMBL top hitse value%identityAlignment
A0A0A0LJX6 Uncharacterized protein3.8e-5881.53Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFW+LTFFYRV+SRACGFRVSLGIG DV +NNANA      N
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
        NNNNNN +SAES + DVG+R D ED +N DQR S SSSNNS+ SRESEMPLAITM S
Subjt:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS

A0A1S3CDW9 Uncharacterized protein3.5e-5678.98Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSLG G DVG NN      N+NN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
        NNNNNN +SAESPR DVG+R + ED +N DQR+S SSSNNS+ SRESEMPLAITM S
Subjt:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS

A0A5A7TCV0 Uncharacterized protein2.1e-5678.98Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSLG G DVG NN      N+NN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
        NNNNNN +SAESPR DVG+R + ED +N DQR+S SSSNNS+ SRESEMPLAITM S
Subjt:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS

A0A6J1D6I2 uncharacterized protein LOC1110175034.0e-4469.57Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIG-VDVGANNANANNNNNN
        MSLV+PS GRAFIWI+T FLFF ILSGGGCL+MYMILPETETTAWLP+ GLSLVCLPWFFWILTFFYRVISRACGFRVSLG+G VD GA  A        
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIG-VDVGANNANANNNNNN

Query:  NNNNNNNNASAESPRHDVGDRADEEDGDNG---DQRQSTSSSNNSVASRESEMPLAITMGS
               NAS+ESP    G   D+EDG  G    +R STSSS NS  SRESEMPLAITM S
Subjt:  NNNNNNNNASAESPRHDVGDRADEEDGDNG---DQRQSTSSSNNSVASRESEMPLAITMGS

A0A6J1EV39 uncharacterized protein LOC1114383195.3e-4469.43Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        MSLV+PSAGRAF+W V   LF  ILSGG CLL+Y+ILPETE+TAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSL +        A + N+ N++
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
        +NNNNNN+S ESPR D   +A EEDG+N DQR+S  SSNNS+ SRESE+P AI+MGS
Subjt:  NNNNNNNASAESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30770.1 Putative membrane lipoprotein2.4e-2046.06Show/hide
Query:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN
        M + +P AG+AFI ++T FLF SI  GGGCL+ Y ILP      WL   G+  VCLPWFFWILTF YR++SR  GFR+ +G     G NN NAN      
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNN

Query:  NNNNNNNASAESP--------RHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS
        + +     S ESP         H  G      +G+   +R ST SSN+++AS ESEMPLAI+M S
Subjt:  NNNNNNNASAESP--------RHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGGTGAATCCCTCAGCTGGACGTGCATTCATATGGATCGTCACTTGCTTTCTCTTCTTCTCCATTCTCAGCGGCGGCGGTTGTCTTTTGATGTACATGATCCT
CCCTGAGACCGAAACCACCGCCTGGCTACCCGTCGCCGGTTTGTCCTTGGTCTGTCTCCCTTGGTTCTTCTGGATCTTAACTTTCTTCTATAGAGTCATCTCACGTGCAT
GTGGTTTTAGAGTCTCCCTTGGTATTGGTGTCGATGTAGGTGCAAATAACGCGAATGCCAATAATAATAATAATAATAATAATAATAATAATAATAATAATGCATCTGCT
GAATCCCCTCGACACGATGTGGGAGATCGAGCTGATGAGGAGGATGGTGACAATGGTGATCAAAGGCAAAGCACTTCGTCCTCCAACAACTCGGTAGCGTCTCGTGAGAG
TGAAATGCCATTAGCCATAACAATGGGGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGGTGAATCCCTCAGCTGGACGTGCATTCATATGGATCGTCACTTGCTTTCTCTTCTTCTCCATTCTCAGCGGCGGCGGTTGTCTTTTGATGTACATGATCCT
CCCTGAGACCGAAACCACCGCCTGGCTACCCGTCGCCGGTTTGTCCTTGGTCTGTCTCCCTTGGTTCTTCTGGATCTTAACTTTCTTCTATAGAGTCATCTCACGTGCAT
GTGGTTTTAGAGTCTCCCTTGGTATTGGTGTCGATGTAGGTGCAAATAACGCGAATGCCAATAATAATAATAATAATAATAATAATAATAATAATAATAATGCATCTGCT
GAATCCCCTCGACACGATGTGGGAGATCGAGCTGATGAGGAGGATGGTGACAATGGTGATCAAAGGCAAAGCACTTCGTCCTCCAACAACTCGGTAGCGTCTCGTGAGAG
TGAAATGCCATTAGCCATAACAATGGGGTCGTAA
Protein sequenceShow/hide protein sequence
MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLGIGVDVGANNANANNNNNNNNNNNNNNASA
ESPRHDVGDRADEEDGDNGDQRQSTSSSNNSVASRESEMPLAITMGS