; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G007540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L10
Genome locationchr10:10359106..10360768
RNA-Seq ExpressionLsi10G007540
SyntenyLsi10G007540
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001197 - Ribosomal protein L10e
IPR016180 - Ribosomal protein L10e/L16
IPR018255 - Ribosomal protein L10e, conserved site
IPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147346.1 60S ribosomal protein L10 [Cucumis sativus]2.9e-12090.46Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQT
        ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL QT
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQT

XP_008459481.1 PREDICTED: 60S ribosomal protein L10-like [Cucumis melo]6.4e-12089.26Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        ADYL +K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_008460864.1 PREDICTED: 60S ribosomal protein L10 [Cucumis melo]1.2e-12190.91Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_022142890.1 60S ribosomal protein L10-like [Momordica charantia]4.9e-12089.26Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        ADYL +K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_022148973.1 60S ribosomal protein L10-like [Momordica charantia]9.9e-12190.08Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        ADYL +KSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA

TrEMBL top hitse value%identityAlignment
A0A0A0LN38 Ribosomal_L16 domain-containing protein1.4e-12090.46Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQT
        ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL QT
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQT

A0A1S3CDF3 60S ribosomal protein L105.7e-12290.91Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A5A7TFE6 60S ribosomal protein L105.7e-12290.91Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A6J1CM71 60S ribosomal protein L10-like2.4e-12089.26Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        ADYL +K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A6J1D5K0 60S ribosomal protein L10-like4.8e-12190.08Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        ADYL +KSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA

SwissProt top hitse value%identityAlignment
P93847 60S ribosomal protein L108.5e-11585.71Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL
         DYLK+KSEN+I+PDGVNAKLLG HGPLA RQPGRAFL
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL

Q08770 60S ribosomal protein L10-22.4e-10980.67Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+R
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL
        ADY K + E +I+PDGVNAK L CHGPLANRQPG AFL
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL

Q93VT9 60S ribosomal protein L10-16.3e-11080.33Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+R
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLP
        AD+ K + E +++PDGVNAK L CHGPLANRQPG AFLP
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLP

Q9M5M7 60S ribosomal protein L103.2e-11483.47Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQKIIVSRKW                      GFTK +R
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        ADY + KSEN+I+PDGVNAKLLGCHG LANR+PGRAF+   A
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA

Q9SPB3 60S ribosomal protein L101.3e-11584.03Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKW                      GFTKF+R
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL
         DY+K+KS+N+I+PDGVNAKLLGCHGPLANRQPG+AF+
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL

Arabidopsis top hitse value%identityAlignment
AT1G14320.1 Ribosomal protein L16p/L10e family protein4.5e-11180.33Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+R
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLP
        AD+ K + E +++PDGVNAK L CHGPLANRQPG AFLP
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLP

AT1G14320.2 Ribosomal protein L16p/L10e family protein2.6e-7158.58Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM                        
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
                                         VLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+R
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLP
        AD+ K + E +++PDGVNAK L CHGPLANRQPG AFLP
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLP

AT1G26910.1 Ribosomal protein L16p/L10e family protein1.7e-11080.67Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+R
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL
        ADY K + E +I+PDGVNAK L CHGPLANRQPG AFL
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL

AT1G66580.1 senescence associated gene 242.7e-10878.51Show/hide
Query:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN
        MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRIN
Subjt:  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRIN

Query:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR
        KMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+R
Subjt:  KMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSR

Query:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        A+Y K ++  +I+PDGVNAK L  HGPLANRQPG AF+  T+
Subjt:  ADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAAGACCTGCTAGATGTTACCGCCAAATCAAGAATAAGCCGTATCCCAAATCGCGATTTTGTCGAGGTGTTCCCGATCCCAAGATCAGGATTTATGATGTTGG
AATGAAGAAGAAGGGTGTTGATGAATTCCCCTTCTGTGTTCATCTTGTGAGTTGGGAGAAAGAAAATGTATCCAGTGAAGCTTTGGAAGCAGCTCGTATTGCCTGTAATA
AGTACATGGCGAAATTTGCTGGAAAAGATGCGTTTCATTTGAGGGTTAGAGTTCATCCCTTCCATGTTCTTCGAATTAACAAGATGCTTTCATGTGCTGGAGCTGATAGG
CTCCAAACTGGTATGAGAGGTGCTTTTGGTAAGCCACAAGGAACTTGTGCAAGAGTCGCCATTGGTCAGGTTCTTCTTTCTGTTCGATGCAAGGACAGCAACAGCCAGCA
TGCTCAGGAGGCCCTTCGCCGCGCTAAGTTCAAGTTTCCTGGTCGTCAGAAGATCATTGTCAGCAGGAAGTGGTATGCCCCTTCATTCTCATTGCATCTGATACTGTTCT
ATATTAAGTTCCAATGCCTTTCCCTTGAGGGATTCACGAAATTTAGCCGAGCTGATTATCTCAAGTTCAAGTCAGAGAACAAGATTATGCCAGATGGTGTTAATGCAAAG
CTTCTTGGATGCCATGGCCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTACCCCAAACTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATAAAATTGAATGATTTTCCATTGGGCCTTTTCCCAGCCCGTAATAGTGGGCCTTTAGGTTTGGTTATCATCTTCAGAAACCCTAGTTTATAATCCACCTTCATTTTCCC
TAAACCCTAATCTTGCAGTCGAAGTTTTCCAGCAGCACAGAGCCATGGGGAGAAGACCTGCTAGATGTTACCGCCAAATCAAGAATAAGCCGTATCCCAAATCGCGATTT
TGTCGAGGTGTTCCCGATCCCAAGATCAGGATTTATGATGTTGGAATGAAGAAGAAGGGTGTTGATGAATTCCCCTTCTGTGTTCATCTTGTGAGTTGGGAGAAAGAAAA
TGTATCCAGTGAAGCTTTGGAAGCAGCTCGTATTGCCTGTAATAAGTACATGGCGAAATTTGCTGGAAAAGATGCGTTTCATTTGAGGGTTAGAGTTCATCCCTTCCATG
TTCTTCGAATTAACAAGATGCTTTCATGTGCTGGAGCTGATAGGCTCCAAACTGGTATGAGAGGTGCTTTTGGTAAGCCACAAGGAACTTGTGCAAGAGTCGCCATTGGT
CAGGTTCTTCTTTCTGTTCGATGCAAGGACAGCAACAGCCAGCATGCTCAGGAGGCCCTTCGCCGCGCTAAGTTCAAGTTTCCTGGTCGTCAGAAGATCATTGTCAGCAG
GAAGTGGTATGCCCCTTCATTCTCATTGCATCTGATACTGTTCTATATTAAGTTCCAATGCCTTTCCCTTGAGGGATTCACGAAATTTAGCCGAGCTGATTATCTCAAGT
TCAAGTCAGAGAACAAGATTATGCCAGATGGTGTTAATGCAAAGCTTCTTGGATGCCATGGCCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTACCCCAAACTGCC
TAAGCTAAGCTAGTTAATTTTCCGTTTCTAAAATTGTGGAATTAATGTCGACATTATTACAATTGTCTCTTTTCGAACATTGTGAAATGAGCGAGTATCTTTTTTGCTGT
GGTTTATTACTTTTTGATATTGGAATGAAGCTTCATTTCTTTTGTTTTA
Protein sequenceShow/hide protein sequence
MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADR
LQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYAPSFSLHLILFYIKFQCLSLEGFTKFSRADYLKFKSENKIMPDGVNAK
LLGCHGPLANRQPGRAFLPQTA