; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G007700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007700
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionacyl-coenzyme A thioesterase 13-like
Genome locationchr10:10537639..10539554
RNA-Seq ExpressionLsi10G007700
SyntenyLsi10G007700
Gene Ontology termsGO:0031047 - gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0047617 - acyl-CoA hydrolase activity (molecular function)
InterPro domainsIPR006683 - Thioesterase domain
IPR029069 - HotDog domain superfamily
IPR039298 - Acyl-coenzyme A thioesterase 13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063086.1 putative esterase F42H10.6 [Cucumis melo var. makuwa]1.5e-5881.17Show/hide
Query:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF
        M K KG V    D+D KV S MDDLPFK++QFFVMTALRIDL+QPGR+LCSLK      N+NNSMR+GASALLVDCLGHAAVKTL P+STGVSLEVN+SF
Subjt:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF

Query:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        FDAAYLDE+IEIDS VLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTY+PVSSKL
Subjt:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

XP_004147338.1 putative esterase F42H10.6 [Cucumis sativus]9.9e-5882.27Show/hide
Query:  DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEID
        +D K+ SAMDDLPF+++QFFVM+ LRIDL+QPGRILCSLKVPARL+N+NNS+R GAS  LVD LGHAAVKTLGP STGVSLEVN+SFFDAAYLDE+IEID
Subjt:  DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEID

Query:  SKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        S VLR+GKTIAVVNVE RKKSNGKIIAQGRLT Y PVSSKL
Subjt:  SKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

XP_008460848.1 PREDICTED: putative esterase F42H10.6 [Cucumis melo]1.2e-6385.06Show/hide
Query:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF
        M K KG V    D+D KV S MDDLPFK++QFFVMTALRIDL+QPGR+LCSLKVPARLLN+NNSMR+GASALLVDCLGHAAVKTL P+STGVSLEVN+SF
Subjt:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF

Query:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        FDAAYLDE+IEIDS VLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTY+PVSSKL
Subjt:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

XP_038901328.1 putative esterase F42H10.6 [Benincasa hispida]1.8e-6788.46Show/hide
Query:  MEKRKGRVEKH--SDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNL
        MEK KG VEKH  SDDDRKVA AMDDLPF+++QFFV+ ALRIDLIQPGRILCSLKVP RLLNENNS+REGASALLVDCLGHAAVKTLGP+STGVSLEVNL
Subjt:  MEKRKGRVEKH--SDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNL

Query:  SFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        SF DAAY DE+IEIDSKVLRMGKTIAVVNVEFRKK NGKIIAQGRLTTY+PVSSKL
Subjt:  SFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

XP_038901620.1 acyl-coenzyme A thioesterase 13 [Benincasa hispida]3.2e-5674.68Show/hide
Query:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF
        MEK K  +EKH DDDR VASA+D LPF++Y+ F+MT LR+DLIQPGRI+CSLKVPARLLN NNS+  GASA LVDC+G AA+KTLG  +TGVSLE+NLS+
Subjt:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF

Query:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
         DAAYLDE+IEIDSKVLRMGKTIAV+NVE R+K NGKIIAQGR T YL  SSKL
Subjt:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

TrEMBL top hitse value%identityAlignment
A0A0A0LQE5 4HBT domain-containing protein4.8e-5882.27Show/hide
Query:  DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEID
        +D K+ SAMDDLPF+++QFFVM+ LRIDL+QPGRILCSLKVPARL+N+NNS+R GAS  LVD LGHAAVKTLGP STGVSLEVN+SFFDAAYLDE+IEID
Subjt:  DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEID

Query:  SKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        S VLR+GKTIAVVNVE RKKSNGKIIAQGRLT Y PVSSKL
Subjt:  SKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

A0A1S3CEJ6 putative esterase F42H10.65.9e-6485.06Show/hide
Query:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF
        M K KG V    D+D KV S MDDLPFK++QFFVMTALRIDL+QPGR+LCSLKVPARLLN+NNSMR+GASALLVDCLGHAAVKTL P+STGVSLEVN+SF
Subjt:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF

Query:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        FDAAYLDE+IEIDS VLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTY+PVSSKL
Subjt:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

A0A5D3BUX4 Putative esterase F42H10.67.4e-5981.17Show/hide
Query:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF
        M K KG V    D+D KV S MDDLPFK++QFFVMTALRIDL+QPGR+LCSLK      N+NNSMR+GASALLVDCLGHAAVKTL P+STGVSLEVN+SF
Subjt:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF

Query:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        FDAAYLDE+IEIDS VLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTY+PVSSKL
Subjt:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

A0A6J1E0I3 acyl-coenzyme A thioesterase 13 isoform X16.5e-5571.61Show/hide
Query:  MEKRKGRVEKHSD-DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLS
        MEK K  +EKH D DDR +ASA+DDLP ++Y+ FVMT LR+DLI+PGR++CSLKVPARLLNENNS+  GA+A LVDC+G AA+KT G ++TGVS+E+N+S
Subjt:  MEKRKGRVEKHSD-DDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLS

Query:  FFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        + DAAYLDE IEI+SKVLRMGKTIAVVNVE RKKSNGKI+AQGR T YL +SSKL
Subjt:  FFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

A0A6J1I0D7 acyl-coenzyme A thioesterase 13-like8.5e-5571.43Show/hide
Query:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF
        M+  K  +EKHSDDD KVASA+D LPFK+YQ+FV+  LR+DLIQPGRI+CSLK+PARLLN+NNS+  GASA LVDC+G AA+KTLG T+TGVSL++NLS+
Subjt:  MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSF

Query:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        FD A+L E+IEID  VLRMG+TIAV NVE RKK+ GKIIAQ RLTTYL +SSKL
Subjt:  FDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

SwissProt top hitse value%identityAlignment
P34419 Putative esterase F42H10.61.3e-0729.63Show/hide
Query:  IQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQG
        +   +++C + V  + LN   ++  G +A L D +   AV          S+E+ +S+     + + +EI + VL++G+T+A  + EFR+KS+GK+ A+G
Subjt:  IQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQG

Query:  RLT-TYLP
        + T  +LP
Subjt:  RLT-TYLP

P87304 Putative esterase C31F10.022.9e-0731.9Show/hide
Query:  VMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDA-AYLDEDIEIDSKVLRMGKTIAVVNVEFRK
        V++ ++I    PG + CSLK+    LN   ++  G  A L D  G  A+ + G   +GVS+++N +F  +   L   I + +K  R+G  IA  +V+F  
Subjt:  VMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDA-AYLDEDIEIDSKVLRMGKTIAVVNVEFRK

Query:  KSNGKIIAQGRLTTYL
         SN ++ A+GR T ++
Subjt:  KSNGKIIAQGRLTTYL

Q5R833 Acyl-coenzyme A thioesterase 131.6e-1337.5Show/hide
Query:  PGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRL
        PG+++C +KV     N   ++  G +A LVD +   A+      + GVS+++N+++   A L EDI I + VL+ GKT+A  +V+   K+ GK+IAQGR 
Subjt:  PGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRL

Query:  TTYL
        T +L
Subjt:  TTYL

Q9CQR4 Acyl-coenzyme A thioesterase 132.3e-1233.65Show/hide
Query:  PGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRL
        P +++C +KV  +  N+  ++  G +A LVD +   A+      + GVS+++N+++   A + E+I I + +L+ GKT+A  +V+   K+ GK+IAQGR 
Subjt:  PGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRL

Query:  TTYL
        T +L
Subjt:  TTYL

Q9NPJ3 Acyl-coenzyme A thioesterase 131.6e-1337.5Show/hide
Query:  PGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRL
        PG+++C +KV     N   ++  G +A LVD +   A+      + GVS+++N+++   A L EDI I + VL+ GKT+A  +V+   K+ GK+IAQGR 
Subjt:  PGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRL

Query:  TTYL
        T +L
Subjt:  TTYL

Arabidopsis top hitse value%identityAlignment
AT1G04290.1 Thioesterase superfamily protein3.9e-3651.75Show/hide
Query:  DDDRKVASAM-DDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIE
        D+D K    M   LP ++ + FV   L++DLI+PGRI+CS+K+P  LLN    +  GA+A LVD +G A + T G + +GVS+E+N+S+ DAA+LDE+IE
Subjt:  DDDRKVASAM-DDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIE

Query:  IDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
        I+SK LR+GK +AVV+VE RKK+ GKIIAQGR T Y    S L
Subjt:  IDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL

AT1G52191.1 Thioesterase superfamily protein2.6e-0826.55Show/hide
Query:  FVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVL-RMGKTIAVVNVEFR
        F++  L++  +  G + C L V   +LNE+ ++   A  +L++ +G  A+ + G + T  S+++N S +  A + E+I+I+++V+ +  + +    +E R
Subjt:  FVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVL-RMGKTIAVVNVEFR

Query:  KKSNGKIIAQGRL
        ++   ++IA GRL
Subjt:  KKSNGKIIAQGRL

AT2G29590.1 Thioesterase superfamily protein1.2e-1335.71Show/hide
Query:  YYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNV
        +Y+ F +  +R++ ++PG I CS KVP RL + + ++  GA A LVD +G A V   G     VS++++++F   A L E++EI S++L          V
Subjt:  YYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDIEIDSKVLRMGKTIAVVNV

Query:  EFRKKSNGKIIAQGRLTTYLPVSSKL
          R K  G+IIA+GR + +   +SKL
Subjt:  EFRKKSNGKIIAQGRLTTYLPVSSKL

AT3G61200.1 Thioesterase superfamily protein1.0e-0727.21Show/hide
Query:  SAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSL-EVNLSFFDAAYLDEDIEIDSKVLR
        S  D   F  +        R   I  GR+ CS+ V   + N    +  GA A + + +  A VKT+      + + E+++S+  +A +  ++ ++  V+R
Subjt:  SAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSL-EVNLSFFDAAYLDEDIEIDSKVLR

Query:  MGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL
         G+ ++VV VEF+ K   K+    R T Y    SKL
Subjt:  MGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGAAAGGGACGCGTAGAGAAGCATAGTGATGATGATCGGAAGGTTGCTTCCGCCATGGACGACCTTCCTTTCAAATATTACCAGTTCTTTGTTATGACTGC
TCTTCGCATTGATCTCATCCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGCTCGTTTGCTTAACGAGAATAATTCCATGCGCGAAGGAGCCTCGGCTTTACTCG
TCGATTGTTTAGGTCATGCAGCGGTAAAGACTTTGGGCCCTACCTCCACCGGAGTCTCCCTCGAAGTCAATCTCTCCTTCTTCGATGCTGCTTATCTCGACGAGGACATT
GAGATTGACAGCAAGGTTTTGCGAATGGGAAAGACCATTGCAGTAGTTAATGTTGAATTTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTCACCACATA
CCTACCCGTCTCGAGCAAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAGAAAGGGACGCGTAGAGAAGCATAGTGATGATGATCGGAAGGTTGCTTCCGCCATGGACGACCTTCCTTTCAAATATTACCAGTTCTTTGTTATGACTGC
TCTTCGCATTGATCTCATCCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGCTCGTTTGCTTAACGAGAATAATTCCATGCGCGAAGGAGCCTCGGCTTTACTCG
TCGATTGTTTAGGTCATGCAGCGGTAAAGACTTTGGGCCCTACCTCCACCGGAGTCTCCCTCGAAGTCAATCTCTCCTTCTTCGATGCTGCTTATCTCGACGAGGACATT
GAGATTGACAGCAAGGTTTTGCGAATGGGAAAGACCATTGCAGTAGTTAATGTTGAATTTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTCACCACATA
CCTACCCGTCTCGAGCAAGTTGTAG
Protein sequenceShow/hide protein sequence
MEKRKGRVEKHSDDDRKVASAMDDLPFKYYQFFVMTALRIDLIQPGRILCSLKVPARLLNENNSMREGASALLVDCLGHAAVKTLGPTSTGVSLEVNLSFFDAAYLDEDI
EIDSKVLRMGKTIAVVNVEFRKKSNGKIIAQGRLTTYLPVSSKL