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Lsi10G007720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionVesicle transport protein
Genome locationchr10:10550803..10561011
RNA-Seq ExpressionLsi10G007720
SyntenyLsi10G007720
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007305 - Vesicle transport protein, Got1/SFT2-like
IPR011691 - Vesicle transport protein SFT2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460845.1 PREDICTED: vesicle transport protein SFT2B [Cucumis melo]1.5e-30100Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
XP_022932027.1 vesicle transport protein SFT2B isoform X2 [Cucurbita moschata]9.7e-3096.05Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLAL+LEFGALIWYSLSYIPFAR+MVS+VM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
XP_022973823.1 vesicle transport protein SFT2B isoform X1 [Cucurbita maxima]7.4e-3097.37Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFAR+MVS+VM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
XP_022973824.1 vesicle transport protein SFT2B isoform X2 [Cucurbita maxima]7.4e-3097.37Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFAR+MVS+VM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
XP_038900581.1 vesicle transport protein SFT2B [Benincasa hispida]5.7e-3096.05Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFL+GPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK+LTLLALILEFGALIWYSLSY+PFARSMVSKVM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
TrEMBL top hitse value%identityAlignment
A0A1S3CDD0 Vesicle transport protein7.2e-31100Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
A0A6J1E0X7 Vesicle transport protein4.7e-3097.37Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFG LIWYSLSYIPFAR+MVSKVM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
A0A6J1EV79 Vesicle transport protein4.7e-3096.05Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLAL+LEFGALIWYSLSYIPFAR+MVS+VM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
A0A6J1IE99 Vesicle transport protein3.6e-3097.37Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFAR+MVS+VM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
A0A6J1IFS2 Vesicle transport protein3.6e-3097.37Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFAR+MVS+VM
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
SwissProt top hitse value%identityAlignment
O95562 Vesicle transport protein SFT2B1.3e-0847.3Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSK
        T FL+GP +Q+  M +P R+ AT + L      L  A + HNK L L+  IL+  AL WYSLS+IPFAR  V K
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSK
Q4FZV2 Vesicle transport protein SFT2B2.8e-0845.95Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSK
        T FL+GP +Q+  M +P R+ AT + L   +  L C+ ++ NK L L+  IL+  AL WYSLSYIP+AR  V K
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSK
Q5SSN7 Vesicle transport protein SFT2A2.6e-0945Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMGNTL
        T FL+GP +Q+  M +  R+ AT I L  ++F L  AL+   K L LL  IL+F ++ WYSLSYIP+AR  V K   + L
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMGNTL
Q5U3Y5 Vesicle transport protein SFT2A2.0e-0944.44Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMGNTLN
        T FL+GP +Q+  M +  R+ AT I L  ++F L  AL+   K L LL  IL+F ++ WYSLSYIP+AR  V K   + L+
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMGNTLN
Q8WV19 Vesicle transport protein SFT2A8.8e-1044.44Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMGNTLN
        T FL+GP +Q+  M +  R+ AT + L   IF L  AL+ H K L +L  IL+F ++ WYSLSYIP+AR  V K   + L+
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMGNTLN
Arabidopsis top hitse value%identityAlignment
AT5G23550.1 Got1/Sft2-like vescicle transport protein family1.5e-2884Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKV
        TAFL+GP+RQVTMMLDP RIYATA+YLAS+I ALFCALYV NKLLTLLA+ILEF  LIWYSLSYIPFAR+MVSK+
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKV
AT5G24170.1 Got1/Sft2-like vescicle transport protein family8.8e-2161.84Show/hide
Query:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM
        TAFL+GP++Q++MM DPVR  AT+IY+  ++ AL CAL +H+K+LT+LA++ E  ALIWYSLSYIPFAR MVS++M
Subjt:  TAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTGCTAGTGAAGAGGAAGATACTGACATTATGGCCTTCGAAGCGTCAACGGTCACAGCATTTCTCGTAGGCCCCAAAAGGCAAGTGACAATGATGCTTGATCC
TGTTCGGATTTATGCGACAGCCATATACCTTGCTAGCATGATATTCGCTCTTTTCTGTGCTCTCTATGTCCACAACAAGCTGTTGACACTTCTTGCGCTCATTTTAGAAT
TTGGTGCCCTAATTTGGTATAGCTTGAGCTACATACCGTTTGCGAGGTCGATGGTTTCAAAGGTTATGGGGAATACTCTGAATCAGCATACCAATCATCCTCGGTTCTTG
TGGCACGACGTTGGCTCTCGACGTTGCTACATAGATGACAAGGGGTTGAATTCGGCTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACTGCTAGTGAAGAGGAAGATACTGACATTATGGCCTTCGAAGCGTCAACGGTCACAGCATTTCTCGTAGGCCCCAAAAGGCAAGTGACAATGATGCTTGATCC
TGTTCGGATTTATGCGACAGCCATATACCTTGCTAGCATGATATTCGCTCTTTTCTGTGCTCTCTATGTCCACAACAAGCTGTTGACACTTCTTGCGCTCATTTTAGAAT
TTGGTGCCCTAATTTGGTATAGCTTGAGCTACATACCGTTTGCGAGGTCGATGGTTTCAAAGGTTATGGGGAATACTCTGAATCAGCATACCAATCATCCTCGGTTCTTG
TGGCACGACGTTGGCTCTCGACGTTGCTACATAGATGACAAGGGGTTGAATTCGGCTGCCTAA
Protein sequenceShow/hide protein sequence
MKTASEEEDTDIMAFEASTVTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMGNTLNQHTNHPRFL
WHDVGSRRCYIDDKGLNSAA