; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G007980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G007980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein TAR1
Genome locationchr10:10785961..10786969
RNA-Seq ExpressionLsi10G007980
SyntenyLsi10G007980
Gene Ontology termsGO:0043457 - regulation of cellular respiration (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3951938.1 hypothetical protein CMV_022457 [Castanea mollissima]5.6e-7773.76Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSS--RFAPLRHS
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRPRFCSDRRALLLIGAW LPRRP IG ALQRHPFSGLVDSAV L  +  + +    A L  +
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSS--RFAPLRHS

Query:  SPSFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDDDVSTGVT--K
        +      + CSHSNPSQKIKVGR C+P GD  +Q PC LRVY PV+SHTCQTPWSVFQDG NGEP GRCQERADAEAR +ARAASHD  +DVS G+T  +
Subjt:  SPSFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDDDVSTGVT--K

Query:  AW
        AW
Subjt:  AW

KAF3969134.1 hypothetical protein CMV_007046 [Castanea mollissima]3.4e-7466.23Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFA-----PL
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRPRFCSDRRALLLIGAW LPRRP IG ALQRHPFSGLVDSA  L    +VS++       P+
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFA-----PL

Query:  RHSSPSFQSR-----------------------QACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERAD
          +SP   ++                       + CSHSNPSQKIKVGR C+P GD  +Q PC LRVY PV+SHTCQTPWSVFQDG NGEP GRCQERAD
Subjt:  RHSSPSFQSR-----------------------QACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERAD

Query:  AEARPKARAASHDLDDDVSTGVT--KAW
        AEAR +ARAASHD  +DVS G+T  +AW
Subjt:  AEARPKARAASHDLDDDVSTGVT--KAW

PHT25997.1 Protein TAR1 [Capsicum baccatum]7.2e-7776.06Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRR LLLIGAW LPRR  +G AL+ HPFSGLVDSAV LRA TRV S FAPLRH+SP
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP

Query:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDD
        SF SRQ CSHSNPSQKIKV +WC P GD  +Q PC LRVYS V+SHTCQTPWS+FQDGSNGEPTG+  +R D E R + RA  + +++
Subjt:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDD

TKR97783.1 hypothetical protein D5086_0000209830 [Populus alba]1.9e-7785.38Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRP FCSDRRALLLIGAW LPRRP IG ALQRHPFSGLVDSAVSLR STRVSS FAPLRHSSP
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP

Query:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERA
        SF SRQACSHSNPSQKIKVGR CNP GD  SQ PC LRVYSPV+SHTCQTPWSVFQD  +G  TG  + RA
Subjt:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERA

TKS01559.1 hypothetical protein D5086_0000171980 [Populus alba]1.6e-8489.2Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRP FCSDRRALLLIGAW LPRRP IG ALQRHPFSGLVDSAVSLRASTRVSS FAPLRHSSP
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP

Query:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR
        SF SRQACSHSNPSQKIKVGR CNP GD  SQ PC LRVYSPV+SHTCQTPWSVFQDG+NGEPTGRC ERA A AR
Subjt:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR

TrEMBL top hitse value%identityAlignment
A0A2N9I9H1 Uncharacterized protein3.6e-9084.5Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRPRFCSDRRALLLIGAW LPRRP IG ALQRHPFSGLVDSAVSLRASTRVSS FAPLRHSSP
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP

Query:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDDDVSTGVT--KAW
        SF SRQ CSHSNPSQKIKVGR CNP GD  +Q P  LRVY PV+SHTCQTPWSVFQDG NGEP GR QE ADAEAR +ARAA HD DDDVS G+T  +AW
Subjt:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDDDVSTGVT--KAW

A0A2N9IDP5 Uncharacterized protein3.6e-9084.5Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRPRFCSDRRALLLIGAW LPRRP IG ALQRHPFSGLVDSAVSLRASTRVSS FAPLRHSSP
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP

Query:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDDDVSTGVT--KAW
        SF SRQ CSHSNPSQKIKVGR CNP GD  +Q P  LRVY PV+SHTCQTPWSVFQDG NGEP GR QE ADAEAR +ARAA HD DDDVS G+T  +AW
Subjt:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDDDVSTGVT--KAW

A0A2N9IJL7 Uncharacterized protein3.6e-9084.5Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRPRFCSDRRALLLIGAW LPRRP IG ALQRHPFSGLVDSAVSLRASTRVSS FAPLRHSSP
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP

Query:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDDDVSTGVT--KAW
        SF SRQ CSHSNPSQKIKVGR CNP GD  +Q P  LRVY PV+SHTCQTPWSVFQDG NGEP GR QE ADAEAR +ARAA HD DDDVS G+T  +AW
Subjt:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDDDVSTGVT--KAW

A0A4U5PMF1 Uncharacterized protein9.2e-7885.38Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRP FCSDRRALLLIGAW LPRRP IG ALQRHPFSGLVDSAVSLR STRVSS FAPLRHSSP
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP

Query:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERA
        SF SRQACSHSNPSQKIKVGR CNP GD  SQ PC LRVYSPV+SHTCQTPWSVFQD  +G  TG  + RA
Subjt:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERA

A0A4U5PWI8 Uncharacterized protein7.8e-8589.2Show/hide
Query:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP
        MCK RSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRP FCSDRRALLLIGAW LPRRP IG ALQRHPFSGLVDSAVSLRASTRVSS FAPLRHSSP
Subjt:  MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSP

Query:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR
        SF SRQACSHSNPSQKIKVGR CNP GD  SQ PC LRVYSPV+SHTCQTPWSVFQDG+NGEPTGRC ERA A AR
Subjt:  SFQSRQACSHSNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAGTTTCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGTTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCTGGG
CTCGCGCCCAAGGTTTTGCAGCGACCGTCGCGCCCTCCTACTCATCGGGGCCTGGCTCTTGCCCCGACGGCCGAGTATAGGTCACGCGCTTCAGCGCCATCCATTTTCGG
GGCTAGTTGATTCGGCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTCGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTTCAGTCCCGACAGGCATGCTCACAC
TCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGTGGTGCAACCCACTAGGGGATCTCACCAGTCAGTTTCCTTGCACCTTACGGGTTTACTCGCCCGTTAACTCGCACAC
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCACGCGCTGCCAGCC
ACGATCTGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAGTTTCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGTTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCTGGG
CTCGCGCCCAAGGTTTTGCAGCGACCGTCGCGCCCTCCTACTCATCGGGGCCTGGCTCTTGCCCCGACGGCCGAGTATAGGTCACGCGCTTCAGCGCCATCCATTTTCGG
GGCTAGTTGATTCGGCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTCGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTTCAGTCCCGACAGGCATGCTCACAC
TCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGTGGTGCAACCCACTAGGGGATCTCACCAGTCAGTTTCCTTGCACCTTACGGGTTTACTCGCCCGTTAACTCGCACAC
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCACGCGCTGCCAGCC
ACGATCTGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGACTTAG
Protein sequenceShow/hide protein sequence
MCKFRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRLGSRPRFCSDRRALLLIGAWLLPRRPSIGHALQRHPFSGLVDSAVSLRASTRVSSRFAPLRHSSPSFQSRQACSH
SNPSQKIKVGRWCNPLGDLTSQFPCTLRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDLDDDVSTGVTKAWT