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Lsi10G008000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G008000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSenescence-associated protein
Genome locationchr10:10788140..10789844
RNA-Seq ExpressionLsi10G008000
SyntenyLsi10G008000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2394631.1 uncharacterized protein HKW66_Vig0179910 [Vigna angularis]1.9e-2384.72Show/hide
Query:  ELTRQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTC--AGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ
        ELT QIAPPTKN HA PPIESRKSSQSVNPYYVWTC   GGTTRP+KARSASPAEG SRPV T GG IDPTQ
Subjt:  ELTRQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTC--AGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ

KEH17031.1 hypothetical protein MTR_0052s0170 [Medicago truncatula]1.1e-3149.73Show/hide
Query:  ELTRQIAPPTKNDHAPPPIESRKSSQSVNPYYVWT---------------------------------------------------------CAGGTTRP
        ELTRQIAPPTKN HAPPPIESRKSSQSVNPYYVWT                                                         CAGGTTRP
Subjt:  ELTRQIAPPTKNDHAPPPIESRKSSQSVNPYYVWT---------------------------------------------------------CAGGTTRP

Query:  IKARSASPAEGMSRPVLTIGGPIDPTQ-----------------------------DSKSPVLLFIVTTSPCQDWVICAPAAF
        IKARSASPAEG S+PV TIGGPIDPTQ                             DS SPVLLFIVTTSPC DWVICAPAAF
Subjt:  IKARSASPAEGMSRPVLTIGGPIDPTQ-----------------------------DSKSPVLLFIVTTSPCQDWVICAPAAF

KOM53365.1 hypothetical protein LR48_Vigan09g202400 [Vigna angularis]3.8e-2475.31Show/hide
Query:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQDSKSPVLLFIVTTS
        RQIAPPTKN HAPPPIESRK SQSVNPYYVWTC GGTTRP+KARSASPAEG SRPV T  G IDPTQ    P L    T +
Subjt:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQDSKSPVLLFIVTTS

OIV89726.1 hypothetical protein TanjilG_03599 [Lupinus angustifolius]2.6e-2589.86Show/hide
Query:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTC--AGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ
        RQIAPPTKN HAPPPIESRKSSQSVNPYYVWTC  AGGTTRP+KARSASPAEG SRPV T GGPIDPTQ
Subjt:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTC--AGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ

OIV89939.1 hypothetical protein TanjilG_27267 [Lupinus angustifolius]6.2e-2792.54Show/hide
Query:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ
        RQIAPPTKN HAPPPIESRKSSQSVNPYYVWTCAGGTTRP+KARSASP EGMSRPV T GGPIDPTQ
Subjt:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ

TrEMBL top hitse value%identityAlignment
A0A072TII3 Uncharacterized protein5.3e-3249.73Show/hide
Query:  ELTRQIAPPTKNDHAPPPIESRKSSQSVNPYYVWT---------------------------------------------------------CAGGTTRP
        ELTRQIAPPTKN HAPPPIESRKSSQSVNPYYVWT                                                         CAGGTTRP
Subjt:  ELTRQIAPPTKNDHAPPPIESRKSSQSVNPYYVWT---------------------------------------------------------CAGGTTRP

Query:  IKARSASPAEGMSRPVLTIGGPIDPTQ-----------------------------DSKSPVLLFIVTTSPCQDWVICAPAAF
        IKARSASPAEG S+PV TIGGPIDPTQ                             DS SPVLLFIVTTSPC DWVICAPAAF
Subjt:  IKARSASPAEGMSRPVLTIGGPIDPTQ-----------------------------DSKSPVLLFIVTTSPCQDWVICAPAAF

A0A1J7FP78 Uncharacterized protein1.3e-2589.86Show/hide
Query:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTC--AGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ
        RQIAPPTKN HAPPPIESRKSSQSVNPYYVWTC  AGGTTRP+KARSASPAEG SRPV T GGPIDPTQ
Subjt:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTC--AGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ

A0A1J7FPL1 Uncharacterized protein3.0e-2792.54Show/hide
Query:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ
        RQIAPPTKN HAPPPIESRKSSQSVNPYYVWTCAGGTTRP+KARSASP EGMSRPV T GGPIDPTQ
Subjt:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQ

A0A2N9EUH1 Uncharacterized protein2.8e-2583.1Show/hide
Query:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQDSKS
        RQI PPTKN HAPPPIESRKSSQSVNPYYVWTC GGTTRP+KARSASP EG SRPV T GGP+ PTQD  S
Subjt:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQDSKS

A0A2N9IDP5 Uncharacterized protein2.8e-2583.1Show/hide
Query:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQDSKS
        RQI PPTKN HAPPPIESRKSSQSVNPYYVWTC GGTTRP+KARSASP EG SRPV T GGP+ PTQD  S
Subjt:  RQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQDSKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAAAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTG
CGCCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCGCATCGCCGGCAGAAGGGATGAGCCGACCGGTGCTCACCATAGGCGGACCAATCGACCCAACCCAAGACTCGA
AGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAAGATTGGGTAATTTGCGCGCCTGCTGCCTTTAAAAATATTTTTGAAACTAGCTGTACTACGAATTCA
TGTTCAAGCTTGCAACTAACGAGGCTACTAGATTTGGAAAGGCTACTAAGTGGTGTAAAATTTTTTTATGCTCGTTTACTTTATCCTCTTCATAAAATTTTTGTAACAAC
TTGTTTTTCTGTTAGGCCTCTGGTTTTGTATCAGTATCAACGTTGGGGTAAAAAGGGGAACTTACATGTTCAGGAGGGGACCACTGAGAATAGGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAAAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTG
CGCCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCGCATCGCCGGCAGAAGGGATGAGCCGACCGGTGCTCACCATAGGCGGACCAATCGACCCAACCCAAGACTCGA
AGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAAGATTGGGTAATTTGCGCGCCTGCTGCCTTTAAAAATATTTTTGAAACTAGCTGTACTACGAATTCA
TGTTCAAGCTTGCAACTAACGAGGCTACTAGATTTGGAAAGGCTACTAAGTGGTGTAAAATTTTTTTATGCTCGTTTACTTTATCCTCTTCATAAAATTTTTGTAACAAC
TTGTTTTTCTGTTAGGCCTCTGGTTTTGTATCAGTATCAACGTTGGGGTAAAAAGGGGAACTTACATGTTCAGGAGGGGACCACTGAGAATAGGAATTAG
Protein sequenceShow/hide protein sequence
MELTRQIAPPTKNDHAPPPIESRKSSQSVNPYYVWTCAGGTTRPIKARSASPAEGMSRPVLTIGGPIDPTQDSKSPVLLFIVTTSPCQDWVICAPAAFKNIFETSCTTNS
CSSLQLTRLLDLERLLSGVKFFYARLLYPLHKIFVTTCFSVRPLVLYQYQRWGKKGNLHVQEGTTENRN