; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G008140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G008140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein TIC 214
Genome locationchr10:11189738..11196400
RNA-Seq ExpressionLsi10G008140
SyntenyLsi10G008140
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015031 - protein transport (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR001648 - Ribosomal protein S18
IPR008896 - Protein TIC214
IPR018275 - Ribosomal protein S18, conserved site
IPR020003 - ATPase, alpha/beta subunit, nucleotide-binding domain, active site
IPR024034 - ATPase, F1/V1 complex, beta/alpha subunit, C-terminal
IPR036870 - Ribosomal protein S18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO22049.1 hypothetical protein [Cucurbita ecuadorensis]4.3e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

ALO22312.1 hypothetical protein [Cucurbita maxima subsp. andreana]4.3e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

ALO22596.1 hypothetical protein [Cucurbita pepo subsp. fraterna]4.3e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

ALO22749.1 Ycf1 [Cucurbita pepo subsp. pepo]4.3e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

XP_023521036.1 uncharacterized protein LOC111784624 [Cucurbita pepo subsp. pepo]4.3e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

TrEMBL top hitse value%identityAlignment
A0A0S2IDC6 Uncharacterized protein2.1e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

A0A0S2IDU4 Ycf12.1e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

A0A0S2IFQ3 Ycf12.1e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

A0A0S2IH24 Uncharacterized protein2.1e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

A0A2H4T231 Protein TIC 2142.1e-8283.25Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT   +    G  +  + + L+  +I +   I S + ++
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

SwissProt top hitse value%identityAlignment
A0A393 Protein TIC 2147.7e-8282.14Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI
        HFFDYGSTTRN MRNLSIQCVFLNNLIFQLFN+FILPSSML RLVNI +FRCNNKMLFVT   +    G  +  + + LV  +I +   I S + I
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI

A4GYX4 Protein TIC 2144.5e-8281.41Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
        GNLVSLCMKIINSVVVVGLYYGFLTTFS+GPSYLFLLRARV    EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN

Query:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI
        NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNI MFRCNNKMLFVT   +    G  +  + + L+  +I +   + S + I
Subjt:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI

A6MM95 Protein TIC 2141.2e-8296.88Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
        GNL+SLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHK

Query:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT
        HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSS L RLVNI MFRCNNKMLFVT
Subjt:  HFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT

Q09WW0 Protein TIC 2145.9e-8281.5Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV    EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN

Query:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII
        NHKHFFDYGST RNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNI MFRCNNKMLFVT   +    G  +  + + LV  +I +   I S + ++
Subjt:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVII

Q14FA0 Protein TIC 2144.5e-8281.41Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
        GNLVSLCMKIINSVVVVGLYYGFLTTFS+GPSYLFLLRARV    EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN

Query:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI
        NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNI MFRCNNKMLFVT   +    G  +  + + L+  +I +   + S + I
Subjt:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI

Arabidopsis top hitse value%identityAlignment
AT2G07739.1 Ycf1 protein7.6e-7790.85Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH-FFW
        GNLV LCMKIINSVVVVGLYYGFLTTFSIGP YLFLLRARV    EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH FFW
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH-FFW

Query:  NNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT
        NNHKHFFDYGSTTRN MRNL IQCVF NNLIF+LFNH ILPSSML RLVNI MFRCNNKMLFVT
Subjt:  NNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT

ATCG00480.1 ATP synthase subunit beta1.1e-6794.2Show/hide
Query:  IYPAVDPLDSTSTMLQPRIVGEDYYETAQRVKQTLQHYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKL
        IYPAVDPLDSTSTMLQPRIVGE++YETAQ+VKQTLQ YKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF L
Subjt:  IYPAVDPLDSTSTMLQPRIVGEDYYETAQRVKQTLQHYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKL

Query:  ILSGESDGLPKQAFYLVGNIDEATAKATNLEMESKLKK
        ILSGE D LP+QAFYLVGNIDEATAKATNLEMESKLKK
Subjt:  ILSGESDGLPKQAFYLVGNIDEATAKATNLEMESKLKK

ATCG01000.1 Ycf1 protein7.9e-8281.41Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV    EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN

Query:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI
        NHKHFFDYGSTTRN MRNL IQCVFLNNLIFQLFNHFILPSSML RLVNI MFRCNNKMLFVT   +    G  +  + + LV  +I +   I S  VI
Subjt:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI

ATCG01130.1 Ycf1 protein7.9e-8281.41Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV    EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWN

Query:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI
        NHKHFFDYGSTTRN MRNL IQCVFLNNLIFQLFNHFILPSSML RLVNI MFRCNNKMLFVT   +    G  +  + + LV  +I +   I S  VI
Subjt:  NHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVI

ATMG00370.1 Ycf1 protein1.5e-7791.46Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH-FFW
        GNLV LCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARV    EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH FFW
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVT---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFH-FFW

Query:  NNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT
        NNHKHFFDYGSTTRN MRNL IQCVF NNLIF+LFNH ILPSSML RLVNI MFRCNNKMLFVT
Subjt:  NNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTT
CCTTCTCCGAGCTCGGGTTACGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAACTCATGATGTTCATATCGATCTATTATGCGCCTC
TGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT
ACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGT
CAACATTTCTATGTTTCGATGCAACAACAAGATGTTATTTGTAACAATAATGAGCCTCACAATAGAATCGGGGGCTCGAATTGATTATAGAAACATGAGTTTAGTTAGTC
GATTTATTAGTGAACAAGGAAAAATATTATCTAGACGGGTAATTATCTATCCAGCAGTAGATCCTTTAGATTCAACCTCAACTATGCTACAACCTCGAATCGTTGGTGAA
GACTATTATGAAACTGCGCAAAGAGTTAAACAAACCTTACAACATTACAAAGAACTGCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTT
AACCGTAGCACGAGCACGAAAAATTGAGCGTTTCTTATCACAACCTTTTTTCGTAGCAGAAGTATTTACTGGTTCCCCCGGGAAATACGTTGGCCTAGCAGAAACAATTA
GAGGGTTTAAATTAATCCTTTCCGGAGAATCAGATGGTCTTCCCAAACAAGCCTTTTATTTGGTAGGTAACATCGATGAAGCTACTGCGAAGGCTACGAACTTAGAAATG
GAGAGCAAATTGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTT
CCTTCTCCGAGCTCGGGTTACGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAACTCATGATGTTCATATCGATCTATTATGCGCCTC
TGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT
ACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGT
CAACATTTCTATGTTTCGATGCAACAACAAGATGTTATTTGTAACAATAATGAGCCTCACAATAGAATCGGGGGCTCGAATTGATTATAGAAACATGAGTTTAGTTAGTC
GATTTATTAGTGAACAAGGAAAAATATTATCTAGACGGGTAATTATCTATCCAGCAGTAGATCCTTTAGATTCAACCTCAACTATGCTACAACCTCGAATCGTTGGTGAA
GACTATTATGAAACTGCGCAAAGAGTTAAACAAACCTTACAACATTACAAAGAACTGCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTT
AACCGTAGCACGAGCACGAAAAATTGAGCGTTTCTTATCACAACCTTTTTTCGTAGCAGAAGTATTTACTGGTTCCCCCGGGAAATACGTTGGCCTAGCAGAAACAATTA
GAGGGTTTAAATTAATCCTTTCCGGAGAATCAGATGGTCTTCCCAAACAAGCCTTTTATTTGGTAGGTAACATCGATGAAGCTACTGCGAAGGCTACGAACTTAGAAATG
GAGAGCAAATTGAAGAAATGA
Protein sequenceShow/hide protein sequence
MNGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVTEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGST
TRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTIMSLTIESGARIDYRNMSLVSRFISEQGKILSRRVIIYPAVDPLDSTSTMLQPRIVGE
DYYETAQRVKQTLQHYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGESDGLPKQAFYLVGNIDEATAKATNLEM
ESKLKK