CuGenDBv2

Gene ID	Lsi10G008330
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	rRNA intron-encoded homing endonuclease, putative
Genome location	chr10:11770391..11772998
RNA-Seq Expression	Lsi10G008330
Synteny	Lsi10G008330
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8652002.1 hypothetical protein Csa_021689 [Cucumis sativus]

1.2e-37

95.65

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QGLADVALRTPPAPYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

KAF1854967.1 hypothetical protein Lal_00048035 [Lupinus albus]

2.2e-34

90.22

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QG ADVA RTP APYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

KAF1856092.1 hypothetical protein Lal_00045206 [Lupinus albus]

2.2e-34

90.22

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QG ADVA RTP APYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

KAF1856185.1 hypothetical protein Lal_00046585 [Lupinus albus]

2.2e-34

90.22

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QG ADVA RTP APYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

KAF1891686.1 hypothetical protein Lal_00049258, partial [Lupinus albus]

2.2e-34

90.22

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QG ADVA RTP APYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDF7 Uncharacterized protein

6.0e-38

95.65

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QGLADVALRTPPAPYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

A0A6A5L4S7 Uncharacterized protein

1.1e-34

90.22

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QG ADVA RTP APYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

A0A6A5L9N6 Uncharacterized protein

1.1e-34

90.22

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QG ADVA RTP APYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

A0A6A5LBQ2 Uncharacterized protein

1.1e-34

90.22

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QG ADVA RTP APYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

A0A6A5P2N0 Uncharacterized protein

1.1e-34

90.22

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Query:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV
        +V TGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDA+QG ADVA RTP APYEK KSLGS  SMV
Subjt:  MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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mRNA sequence

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ATGGTGAGCACCGGTCGGCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCTACGAACAACTGCGAAAGCATTTGCCAAGGA
TGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCAACCAGGGATTGGCGGATGTTGCTTTAAGGA
CTCCCCCAGCACCTTATGAGAAATTAAAGTCTTTGGGTTCCGAAAGGAGTATGGTTATGGTAGATCCCGATGCTCCTAGTCCTATTATGCTGGAAGACATGTTTTTCAGG
TCTGCAGGAGTTTCCATTTTCAATGGAAAAAGTAGAGACCAAGAACAAGCAAGGAAGCTGTCTAAGGTTTTGGATGGATCCTTTGAATTTATGCTTACATCTGAAGATCT
TGAGAGGGAGATTGGTTGGAGATTTCCCTTGGAGATATGTTGCTTGCTAGTTAAGATCTAATTTTTATGTTTTATGATTATAGAAGACCAAATATAGATGACTGAATTTA
GTGCAGAAGATGGATGAGTTTTGAGAGAATCTGTTTATGTCTGATTATAATCCTCCTATATATCAGTGTCCACTTTTGACCCTTGGTTCTTAAATCTTGCATACCGTTTT
TAAGAAAGGAGAAAAAGTTTAACTAGTTTGATGAATATTTAACTTGGGTCACTTGACATGTTTAATTCCCTTTTGATTGAATGAGATGCAATTTACTCT

Protein sequence

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MVSTGRLVPSAGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDANQGLADVALRTPPAPYEKLKSLGSERSMVMVDPDAPSPIMLEDMFFR
SAGVSIFNGKSRDQEQARKLSKVLDGSFEFMLTSEDLEREIGWRFPLEICCLLVKI

Lsi10G008330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome