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Lsi10G008350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G008350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:11792476..11792786
RNA-Seq ExpressionLsi10G008350
SyntenyLsi10G008350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607617.1 hypothetical protein SDJN03_00959, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0554.17Show/hide
Query:  WKPEELDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISDIK
        +K  ++D++ I P++LQ +RK+WED+ +A+++YQ KNAKLLVEISDI+
Subjt:  WKPEELDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISDIK
XP_022158998.1 probable transcription factor At4g01260 [Momordica charantia]2.5e-0738.71Show/hide
Query:  EKLFELWSNIWGDQNPKTTGPPYSSIIQWKPE-----------------ELDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISDIK
        EKL+E+ +NIWG  +   T    S   QWK E                 ++DI+ IPP+VL  IRK+WE ++ A+++Y+ KNA LL++IS I+
Subjt:  EKLFELWSNIWGDQNPKTTGPPYSSIIQWKPE-----------------ELDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISDIK
XP_038877618.1 STOREKEEPER protein-like [Benincasa hispida]3.8e-1654.9Show/hide
Query:  EKLFELWSNIWGD--QNPKTT----GPPYSS---IIQWKPEE-----------------LDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISD
        EK+FEL  NIWGD  +NPK+T    GP  SS   IIQWKPEE                 LD+T IP  VL+ +RKEWEDVR ARNDY+ KNA LL EISD
Subjt:  EKLFELWSNIWGD--QNPKTT----GPPYSS---IIQWKPEE-----------------LDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISD

Query:  IK
        I+
Subjt:  IK
TrEMBL top hitse value%identityAlignment
A0A0A0L833 Uncharacterized protein4.3e-1356.32Show/hide
Query:  NSNKEKLFELWSNIWGD-QNPKTTGPPYS-------SIIQWKPEEL--DITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEIS
        +SN +KLFEL SNIWGD +NPK +  P +        + Q   E+L  DIT+IPP  LQ+IRKEWEDV SARN Y+ K AKLL EIS
Subjt:  NSNKEKLFELWSNIWGD-QNPKTTGPPYS-------SIIQWKPEEL--DITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEIS
A0A6J1DXL5 probable transcription factor At4g012601.2e-0738.71Show/hide
Query:  EKLFELWSNIWGDQNPKTTGPPYSSIIQWKPE-----------------ELDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISDIK
        EKL+E+ +NIWG  +   T    S   QWK E                 ++DI+ IPP+VL  IRK+WE ++ A+++Y+ KNA LL++IS I+
Subjt:  EKLFELWSNIWGDQNPKTTGPPYSSIIQWKPE-----------------ELDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISDIK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGTAATAAGGAGAAGTTGTTTGAGTTATGGAGCAACATTTGGGGCGACCAAAACCCTAAAACTACTGGACCCCCATATTCTTCAATAATTCAATGGAAGCCTGA
AGAACTTGACATCACCTACATTCCACCTGATGTTTTGCAACACATTAGAAAAGAATGGGAAGATGTGAGGAGTGCTAGGAATGATTATCAGTTCAAGAATGCCAAGTTAC
TTGTGGAAATCTCTGATATTAAGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATAGTAATAAGGAGAAGTTGTTTGAGTTATGGAGCAACATTTGGGGCGACCAAAACCCTAAAACTACTGGACCCCCATATTCTTCAATAATTCAATGGAAGCCTGA
AGAACTTGACATCACCTACATTCCACCTGATGTTTTGCAACACATTAGAAAAGAATGGGAAGATGTGAGGAGTGCTAGGAATGATTATCAGTTCAAGAATGCCAAGTTAC
TTGTGGAAATCTCTGATATTAAGATGTAG
Protein sequenceShow/hide protein sequence
MNSNKEKLFELWSNIWGDQNPKTTGPPYSSIIQWKPEELDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISDIKM