; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G008480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G008480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEF-hand domain-containing protein
Genome locationchr10:12439333..12439677
RNA-Seq ExpressionLsi10G008480
SyntenyLsi10G008480
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570861.1 Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia]4.3e-4278.26Show/hide
Query:  MARK--VGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLM
        MARK   G  F DLLP+MAEKLGG+GLI ELCNGF++LMDKEKG+ITLESL+RNS LLG+ DMG EEL+SMM+EGDLDGDGALNQMEFCVLMFRLSP+LM
Subjt:  MARK--VGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLM

Query:  QHSLYWLQHALESEF
        + SLYWL  ALE EF
Subjt:  QHSLYWLQHALESEF

XP_004140055.1 calcium-binding protein KRP1 [Cucumis sativus]1.1e-5089.38Show/hide
Query:  MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQH
        M++K GANFQDLLP+MAEKLGG+GLIKELCNGFEVLMDKEKG+ITLESL+RNSWLLGVRDM  EELLSMM+EGDLDGDGALNQMEFCVLMFRLSPDLMQH
Subjt:  MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQH

Query:  SLYWLQHALESEF
        SLYWLQ ALE+EF
Subjt:  SLYWLQHALESEF

XP_022944617.1 calcium-binding protein PBP1-like [Cucurbita moschata]1.3e-4179.63Show/hide
Query:  GANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWL
        G  F DLLP+MAEKLGG+GLI ELCNGF++LMDKEKG+ITLESL+RNS LLG+ DMG EEL+SMM+EGDLDGDGALNQMEFCVLMFRLSP+LM+ SLYWL
Subjt:  GANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWL

Query:  QHALESEF
          ALE EF
Subjt:  QHALESEF

XP_022986403.1 calcium-binding protein PBP1-like [Cucurbita maxima]1.3e-4179.63Show/hide
Query:  GANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWL
        G  F DLLP+MAEKLGG+GLI ELCNGF++LMDKEKG+ITLESL+RNS LLG+ DMG EEL+SMM+EGDLDGDGALNQMEFCVLMFRLSP+LM+ SLYWL
Subjt:  GANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWL

Query:  QHALESEF
          ALE EF
Subjt:  QHALESEF

XP_038902367.1 calcium-binding protein KRP1-like [Benincasa hispida]1.8e-5190.35Show/hide
Query:  MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQH
        MARKVG+NFQDLLP+MAEKLGG+GLIKELCNGFEVLMDKEKGLITLESL+ NSWLLGVRDM  EELLSMM+EGDLDGDGALNQMEFCVLMFRLSPDLMQH
Subjt:  MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQH

Query:  SLYWLQHALESEFN
        SL WLQ+ALE EFN
Subjt:  SLYWLQHALESEFN

TrEMBL top hitse value%identityAlignment
A0A0A0KCV2 EF-hand domain-containing protein5.5e-5189.38Show/hide
Query:  MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQH
        M++K GANFQDLLP+MAEKLGG+GLIKELCNGFEVLMDKEKG+ITLESL+RNSWLLGVRDM  EELLSMM+EGDLDGDGALNQMEFCVLMFRLSPDLMQH
Subjt:  MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQH

Query:  SLYWLQHALESEF
        SLYWLQ ALE+EF
Subjt:  SLYWLQHALESEF

A0A2P5AVV6 Parvalbumin2.8e-3973.58Show/hide
Query:  ANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQ
        ++F+DLLP+MAE+LGG+GLIKELC+GFE+LMDKE+GLITLESL+RN+ +LG++DM  +EL+SM++EGDLDGDGALNQMEFCVLMFRLSPDLM+ S +WLQ
Subjt:  ANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQ

Query:  HALESE
        H L+ E
Subjt:  HALESE

A0A6J1FW37 calcium-binding protein PBP1-like6.1e-4279.63Show/hide
Query:  GANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWL
        G  F DLLP+MAEKLGG+GLI ELCNGF++LMDKEKG+ITLESL+RNS LLG+ DMG EEL+SMM+EGDLDGDGALNQMEFCVLMFRLSP+LM+ SLYWL
Subjt:  GANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWL

Query:  QHALESEF
          ALE EF
Subjt:  QHALESEF

A0A6J1HZZ8 calcium-binding protein PBP1-like1.5e-4077.88Show/hide
Query:  MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQH
        MARK  A F DLLP+MAE+LGG+GLI ELCNGF++LMDKEKG+ITL+SL+ NS LLG+RDMG  ELLSMM EGDLDGDGALNQMEFCVLMFRLSP+LMQH
Subjt:  MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQH

Query:  SLYWLQHALESEF
        SLY LQHA   +F
Subjt:  SLYWLQHALESEF

A0A6J1JGE3 calcium-binding protein PBP1-like6.1e-4279.63Show/hide
Query:  GANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWL
        G  F DLLP+MAEKLGG+GLI ELCNGF++LMDKEKG+ITLESL+RNS LLG+ DMG EEL+SMM+EGDLDGDGALNQMEFCVLMFRLSP+LM+ SLYWL
Subjt:  GANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWL

Query:  QHALESEF
          ALE EF
Subjt:  QHALESEF

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP12.7e-3163.55Show/hide
Query:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRN-SWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQ
        NF D LP MA  LGG+GLI ELCNGFE+LMD+EKG+IT ESL+RN + +LG+ D+ +E++  M+KEGD D DGALNQMEFCVLMFRLSPDLM+ S   + 
Subjt:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRN-SWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQ

Query:  HALESEF
          +E EF
Subjt:  HALESEF

Q2TBN3 Centrin-22.5e-0836.78Show/hide
Query:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLS
        NF D L +M +K+      +E+   F++  D E G I+ ++LKR +  LG  ++ +EEL  M+ E D DGDG +N+ EF  +M + S
Subjt:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP11.2e-2960.38Show/hide
Query:  FQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRN-SWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQH
        FQD  P MA KLGG+GLI+E+C GFE+LMDK+KG+IT ESL+RN S +LG+ D+ ++++  M+ EGD D DGALNQMEFCVLMFRLSP+LM+ S   +  
Subjt:  FQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRN-SWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQH

Query:  ALESEF
         +E EF
Subjt:  ALESEF

Q9R1K9 Centrin-24.3e-0836.78Show/hide
Query:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLS
        NF D L +M +K+      +E+   F++  D E G I+ ++LKR +  LG  ++ +EEL  M+ E D DGDG +N+ EF  +M + S
Subjt:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLS

Q9ZPX9 Calcium-binding protein KIC3.7e-2853.21Show/hide
Query:  KVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLY
        K+   ++D+LP+MAEK+  +  + ELC GF +L D E+ LIT ESL+RNS +LG+  M  E+   M++EGDLDGDGALNQ EFCVLM RLSP++M+ +  
Subjt:  KVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLY

Query:  WLQHALESE
        WL+ AL  E
Subjt:  WLQHALESE

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 47.0e-0633.73Show/hide
Query:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLM
        +F + L LMA+K+      +EL   F V    + G I+   L+     LG + + +EE+  M++E D+DGDG +N  EF  +M
Subjt:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLM

AT2G46600.1 Calcium-binding EF-hand family protein2.6e-2953.21Show/hide
Query:  KVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLY
        K+   ++D+LP+MAEK+  +  + ELC GF +L D E+ LIT ESL+RNS +LG+  M  E+   M++EGDLDGDGALNQ EFCVLM RLSP++M+ +  
Subjt:  KVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLY

Query:  WLQHALESE
        WL+ AL  E
Subjt:  WLQHALESE

AT4G14640.1 calmodulin 81.4e-0636.47Show/hide
Query:  FQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRL
        F + L LMA+KL      +EL   F+V    + G I+   L      LG + + +EE+  M+KE DLDGDG +N  EF  +M  +
Subjt:  FQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRL

AT4G27280.1 Calcium-binding EF-hand family protein1.9e-3263.55Show/hide
Query:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRN-SWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQ
        NF D LP MA  LGG+GLI ELCNGFE+LMD+EKG+IT ESL+RN + +LG+ D+ +E++  M+KEGD D DGALNQMEFCVLMFRLSPDLM+ S   + 
Subjt:  NFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRN-SWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQ

Query:  HALESEF
          +E EF
Subjt:  HALESEF

AT5G54490.1 pinoid-binding protein 18.2e-3160.38Show/hide
Query:  FQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRN-SWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQH
        FQD  P MA KLGG+GLI+E+C GFE+LMDK+KG+IT ESL+RN S +LG+ D+ ++++  M+ EGD D DGALNQMEFCVLMFRLSP+LM+ S   +  
Subjt:  FQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRN-SWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQH

Query:  ALESEF
         +E EF
Subjt:  ALESEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAAAGGTTGGTGCTAATTTCCAGGACCTGCTTCCATTAATGGCAGAGAAATTGGGAGGAGATGGGCTGATAAAGGAGCTGTGTAATGGGTTTGAAGTGCTGAT
GGACAAGGAGAAAGGGTTGATCACTTTGGAAAGCCTTAAGAGAAACTCTTGGCTGTTGGGTGTGCGAGACATGGGAAACGAGGAGCTTCTCAGCATGATGAAGGAGGGCG
ATTTAGATGGCGATGGTGCTTTGAATCAGATGGAATTTTGTGTCTTGATGTTTAGATTAAGCCCTGATTTGATGCAACACTCTTTGTATTGGCTTCAACATGCTTTGGAA
AGCGAGTTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGAAAGGTTGGTGCTAATTTCCAGGACCTGCTTCCATTAATGGCAGAGAAATTGGGAGGAGATGGGCTGATAAAGGAGCTGTGTAATGGGTTTGAAGTGCTGAT
GGACAAGGAGAAAGGGTTGATCACTTTGGAAAGCCTTAAGAGAAACTCTTGGCTGTTGGGTGTGCGAGACATGGGAAACGAGGAGCTTCTCAGCATGATGAAGGAGGGCG
ATTTAGATGGCGATGGTGCTTTGAATCAGATGGAATTTTGTGTCTTGATGTTTAGATTAAGCCCTGATTTGATGCAACACTCTTTGTATTGGCTTCAACATGCTTTGGAA
AGCGAGTTTAATTAA
Protein sequenceShow/hide protein sequence
MARKVGANFQDLLPLMAEKLGGDGLIKELCNGFEVLMDKEKGLITLESLKRNSWLLGVRDMGNEELLSMMKEGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQHALE
SEFN