; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G008530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G008530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:12545300..12546614
RNA-Seq ExpressionLsi10G008530
SyntenyLsi10G008530
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047046.1 uncharacterized protein E6C27_scaffold829G00310 [Cucumis melo var. makuwa]1.4e-7172.2Show/hide
Query:  MGTTLQTKP-TTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDR
        MGT   TKP TTTLAA+L+LED++T S  NCRCS N     SA SLPPK  LSRTARAIVFG ILI RVRERK H Q K DGRKRSL LDS  + VKE+R
Subjt:  MGTTLQTKP-TTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDR

Query:  ESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSIL
        ES KREL GIYQENR+I       LSSGS QSF IS+SEPKISNKKT  GNE IGVKQR++ +SRRS YAFNS VRLL+VSLGVTVMQGR++GILITSI 
Subjt:  ESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSIL

Query:  VYFFGWMQMENCWLKKKATKFIE
        VYFF WMQME+CWLK KATKF+E
Subjt:  VYFFGWMQMENCWLKKKATKFIE

XP_004139966.1 uncharacterized protein LOC101210838 [Cucumis sativus]1.3e-6971.62Show/hide
Query:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE
        M T   TKPTTTLAAYL+LED++T S   CRCSTN     SA SL PK  LSRTARAIVFG ILI RVRERK H Q KSDGRKRSLSLDS  + VKE+RE
Subjt:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE

Query:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV
          K+EL GI QENR+I      SLSSGS QSF IS+SEPKISNKKT  G E IGVKQR++  SRRS YAFNS VRLL+VSLGVTVMQGR++GILITSI V
Subjt:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV

Query:  YFFGWMQMENCWLKKKATKFIE
        YFF WMQME+CWLKKKATK +E
Subjt:  YFFGWMQMENCWLKKKATKFIE

XP_008448227.1 PREDICTED: uncharacterized protein LOC103490482 [Cucumis melo]2.9e-7272.07Show/hide
Query:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE
        MGT   TKP TTLAA+L+LED++T S  NCRCS N     SA SLPPK  LSRTARAIVFG ILI RVRERK H Q K DGRKRSL LDS  + VKE+RE
Subjt:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE

Query:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV
        S KREL GIYQENR+I       LSSGS QSF IS+SEPKISNKKT  GNE IGVKQR++ +SRRS YAFNS VRLL+VSLGVTVMQGR++GILITSI V
Subjt:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV

Query:  YFFGWMQMENCWLKKKATKFIE
        YFF WMQME+CWLK KATKF+E
Subjt:  YFFGWMQMENCWLKKKATKFIE

XP_022944613.1 uncharacterized protein LOC111449019 [Cucurbita moschata]3.1e-6664.73Show/hide
Query:  MGTTLQTKPTTTLAAYLNLEDEET------PSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLS
        MGT L+TKPTTTLAAYL+LED+ET      PS  +CRCS NSGRDCSA S PPKR LSRTAR IVFG ILI RVRER+ +HQQKSD RKRS SLDSGS  
Subjt:  MGTTLQTKPTTTLAAYLNLEDEET------PSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLS

Query:  VKEDRESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGIL
        V           GGIYQ+NRD QLV +    SGS+QSFPIS+S+PKIS KK +SG+ TIG +Q        S YAFNSG+ LL+VS GVTVMQGR+I IL
Subjt:  VKEDRESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGIL

Query:  ITSILVYFFGWMQMENCWLKKKATKFIETEVTGIVRSGCNN
        ITSI VYFF WM ME+ WL+KK T+F ETEV   +RSGC N
Subjt:  ITSILVYFFGWMQMENCWLKKKATKFIETEVTGIVRSGCNN

XP_022986371.1 uncharacterized protein LOC111484130 [Cucurbita maxima]4.0e-6664.73Show/hide
Query:  MGTTLQTKPTTTLAAYLNLEDEET------PSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLS
        MGT L+TKPTTTLAAYL+LED+ET      PS  +CRCS NSGRDCSA S PPKR LSR ARAIVFG ILI +VRER+ +HQQKSD RKRS SLDSGS  
Subjt:  MGTTLQTKPTTTLAAYLNLEDEET------PSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLS

Query:  VKEDRESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGIL
        V           GGIYQ+NRD QLV +    SGS+QSFPIS+S+P+IS KK ++G+ TIGV+Q        S YAFNSGV LL+VS G TVMQGR+IGIL
Subjt:  VKEDRESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGIL

Query:  ITSILVYFFGWMQMENCWLKKKATKFIETEVTGIVRSGCNN
        ITSI VYFF WM ME+ WL+KK T+F ETEV G +RSGC N
Subjt:  ITSILVYFFGWMQMENCWLKKKATKFIETEVTGIVRSGCNN

TrEMBL top hitse value%identityAlignment
A0A0A0KE38 Uncharacterized protein6.5e-7071.62Show/hide
Query:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE
        M T   TKPTTTLAAYL+LED++T S   CRCSTN     SA SL PK  LSRTARAIVFG ILI RVRERK H Q KSDGRKRSLSLDS  + VKE+RE
Subjt:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE

Query:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV
          K+EL GI QENR+I      SLSSGS QSF IS+SEPKISNKKT  G E IGVKQR++  SRRS YAFNS VRLL+VSLGVTVMQGR++GILITSI V
Subjt:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV

Query:  YFFGWMQMENCWLKKKATKFIE
        YFF WMQME+CWLKKKATK +E
Subjt:  YFFGWMQMENCWLKKKATKFIE

A0A1S3BK26 uncharacterized protein LOC1034904821.4e-7272.07Show/hide
Query:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE
        MGT   TKP TTLAA+L+LED++T S  NCRCS N     SA SLPPK  LSRTARAIVFG ILI RVRERK H Q K DGRKRSL LDS  + VKE+RE
Subjt:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE

Query:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV
        S KREL GIYQENR+I       LSSGS QSF IS+SEPKISNKKT  GNE IGVKQR++ +SRRS YAFNS VRLL+VSLGVTVMQGR++GILITSI V
Subjt:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV

Query:  YFFGWMQMENCWLKKKATKFIE
        YFF WMQME+CWLK KATKF+E
Subjt:  YFFGWMQMENCWLKKKATKFIE

A0A5A7TYI9 Uncharacterized protein6.9e-7272.2Show/hide
Query:  MGTTLQTKP-TTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDR
        MGT   TKP TTTLAA+L+LED++T S  NCRCS N     SA SLPPK  LSRTARAIVFG ILI RVRERK H Q K DGRKRSL LDS  + VKE+R
Subjt:  MGTTLQTKP-TTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDR

Query:  ESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSIL
        ES KREL GIYQENR+I       LSSGS QSF IS+SEPKISNKKT  GNE IGVKQR++ +SRRS YAFNS VRLL+VSLGVTVMQGR++GILITSI 
Subjt:  ESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSIL

Query:  VYFFGWMQMENCWLKKKATKFIE
        VYFF WMQME+CWLK KATKF+E
Subjt:  VYFFGWMQMENCWLKKKATKFIE

A0A5D3B9T8 Uncharacterized protein1.4e-7272.07Show/hide
Query:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE
        MGT   TKP TTLAA+L+LED++T S  NCRCS N     SA SLPPK  LSRTARAIVFG ILI RVRERK H Q K DGRKRSL LDS  + VKE+RE
Subjt:  MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRE

Query:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV
        S KREL GIYQENR+I       LSSGS QSF IS+SEPKISNKKT  GNE IGVKQR++ +SRRS YAFNS VRLL+VSLGVTVMQGR++GILITSI V
Subjt:  SGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILV

Query:  YFFGWMQMENCWLKKKATKFIE
        YFF WMQME+CWLK KATKF+E
Subjt:  YFFGWMQMENCWLKKKATKFIE

A0A6J1FY81 uncharacterized protein LOC1114490191.5e-6664.73Show/hide
Query:  MGTTLQTKPTTTLAAYLNLEDEET------PSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLS
        MGT L+TKPTTTLAAYL+LED+ET      PS  +CRCS NSGRDCSA S PPKR LSRTAR IVFG ILI RVRER+ +HQQKSD RKRS SLDSGS  
Subjt:  MGTTLQTKPTTTLAAYLNLEDEET------PSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLS

Query:  VKEDRESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGIL
        V           GGIYQ+NRD QLV +    SGS+QSFPIS+S+PKIS KK +SG+ TIG +Q        S YAFNSG+ LL+VS GVTVMQGR+I IL
Subjt:  VKEDRESGKRELGGIYQENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGIL

Query:  ITSILVYFFGWMQMENCWLKKKATKFIETEVTGIVRSGCNN
        ITSI VYFF WM ME+ WL+KK T+F ETEV   +RSGC N
Subjt:  ITSILVYFFGWMQMENCWLKKKATKFIETEVTGIVRSGCNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACAACCCTCCAAACCAAACCTACCACCACTTTGGCGGCCTATCTCAACCTTGAAGACGAAGAAACCCCATCCAGCTCAAATTGTCGCTGCTCCACAAATTCCGG
CCGAGACTGCTCCGCCAGTTCTCTCCCACCAAAGCGAACTCTTTCTCGGACCGCCAGAGCCATCGTGTTTGGTAGGATTCTGATCAATAGAGTTCGTGAGAGAAAACGCC
ACCATCAACAGAAATCTGACGGCCGGAAGCGAAGTTTATCGCTGGATTCTGGAAGTTTGTCCGTAAAGGAAGACAGGGAGTCGGGTAAAAGAGAATTAGGTGGAATTTAC
CAAGAAAACAGAGATATCCAACTAGTTTCCTTGTGTTCTCTTTCATCTGGGTCAGCTCAATCTTTTCCAATTTCAATGTCAGAACCAAAAATCTCGAATAAGAAAACCAG
CAGTGGGAATGAAACCATTGGCGTGAAGCAGAGAGATATCAACCAGAGCAGGAGGAGTTTCTATGCATTCAATTCAGGCGTTAGATTGCTTGTGGTGAGTCTCGGAGTGA
CAGTGATGCAGGGCAGAATAATTGGCATCTTGATCACATCAATTTTGGTCTACTTTTTTGGTTGGATGCAGATGGAGAATTGCTGGCTGAAGAAGAAAGCAACAAAATTT
ATAGAAACAGAGGTTACGGGTATTGTGAGGAGTGGCTGTAACAATCGGAGGGCTTAG
mRNA sequenceShow/hide mRNA sequence
GGTAAAGACACTCACAAACATCAAAAAGCTGAGTTTTGTAGTTTTGTTGTATTGCTTCTTACGTTTTCAATGATTATGCCGATAACGACTATGCACTTCCATATATACTA
CTTCAGCTTCAAATCCCAACCCACGCACATACAAATCCACGCTTTCGTCTCTTTATATAGCGCTTGAGAAATCAACGAAACTCGTTTTTTCGAGCAACAACATTTTGCTC
TGTTTCCGACCCGCCGTTGACATGGGAACAACCCTCCAAACCAAACCTACCACCACTTTGGCGGCCTATCTCAACCTTGAAGACGAAGAAACCCCATCCAGCTCAAATTG
TCGCTGCTCCACAAATTCCGGCCGAGACTGCTCCGCCAGTTCTCTCCCACCAAAGCGAACTCTTTCTCGGACCGCCAGAGCCATCGTGTTTGGTAGGATTCTGATCAATA
GAGTTCGTGAGAGAAAACGCCACCATCAACAGAAATCTGACGGCCGGAAGCGAAGTTTATCGCTGGATTCTGGAAGTTTGTCCGTAAAGGAAGACAGGGAGTCGGGTAAA
AGAGAATTAGGTGGAATTTACCAAGAAAACAGAGATATCCAACTAGTTTCCTTGTGTTCTCTTTCATCTGGGTCAGCTCAATCTTTTCCAATTTCAATGTCAGAACCAAA
AATCTCGAATAAGAAAACCAGCAGTGGGAATGAAACCATTGGCGTGAAGCAGAGAGATATCAACCAGAGCAGGAGGAGTTTCTATGCATTCAATTCAGGCGTTAGATTGC
TTGTGGTGAGTCTCGGAGTGACAGTGATGCAGGGCAGAATAATTGGCATCTTGATCACATCAATTTTGGTCTACTTTTTTGGTTGGATGCAGATGGAGAATTGCTGGCTG
AAGAAGAAAGCAACAAAATTTATAGAAACAGAGGTTACGGGTATTGTGAGGAGTGGCTGTAACAATCGGAGGGCTTAGGGCGGTAGAATGATGGAAAAACCAGAAAAGGC
ATTAAATCTTTGATGTGGAAAATCTCTATTACGTGTTTGATCATTTATGGAAGCTCTCCCTTGTCAAAAGGACTGTGTTTTCTGTTCCTCTGCTTCTCTGTTACATTCCC
TCTTTTATCTGTTGGAGTGTGAAAGATTGTGTTCTAATGCTTTGAAATACTTTCTTTAAGCCAGATGTTTCTATAATTTTGAAGTTAGTCAATCAGTTGGGTTGTGGAAA
TTAAACCCAATTGTAATGTTGGTTTTAAA
Protein sequenceShow/hide protein sequence
MGTTLQTKPTTTLAAYLNLEDEETPSSSNCRCSTNSGRDCSASSLPPKRTLSRTARAIVFGRILINRVRERKRHHQQKSDGRKRSLSLDSGSLSVKEDRESGKRELGGIY
QENRDIQLVSLCSLSSGSAQSFPISMSEPKISNKKTSSGNETIGVKQRDINQSRRSFYAFNSGVRLLVVSLGVTVMQGRIIGILITSILVYFFGWMQMENCWLKKKATKF
IETEVTGIVRSGCNNRRA