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Lsi10G008620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G008620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWound-responsive family protein
Genome locationchr10:12792102..12792362
RNA-Seq ExpressionLsi10G008620
SyntenyLsi10G008620
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047914.1 wound-responsive family protein [Cucumis melo var. makuwa]1.6e-2575.56Show/hide
Query:  MSY--LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEK-TRKADGEESIRRVMYLNCWGQG
        MSY  LGRRMWM ASVAVVQ  QSD GHHEA+KGV+ L Q LRVS+AETTAV++RPISSA N EGE   R+A+GEES+RRVMYLNCWGQG
Subjt:  MSY--LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEK-TRKADGEESIRRVMYLNCWGQG

KAE8646838.1 hypothetical protein Csa_020898 [Cucumis sativus]1.1e-1661.54Show/hide
Query:  MSY----LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKTRKADGEESIRRVMYLNCWGQG
        MSY    LGRRMWMTASVAVVQG QSD GHHEA+KGVI L Q LRV + E                 +  R+ADGEES+RRVMYLNCWGQG
Subjt:  MSY----LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKTRKADGEESIRRVMYLNCWGQG

KAE8646839.1 hypothetical protein Csa_020660 [Cucumis sativus]1.1e-1661.54Show/hide
Query:  MSY----LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKTRKADGEESIRRVMYLNCWGQG
        MSY    LGRRMWMTASVAVVQG QSD GHHEA+KGVI L Q LRV + E                 +  R+ADGEES+RRVMYLNCWGQG
Subjt:  MSY----LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKTRKADGEESIRRVMYLNCWGQG

KAG6604822.1 Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia]6.4e-1453.93Show/hide
Query:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETT--AVDVRPISSARNHEG-EKTRKADGEESIRRVMYLNCWGQG
        MSYLG R+WM ASVAVV G QSDG H +++G++ L +N     AETT  AVD+R  S+A +H   +   K   +ES+RRVMY NCWGQG
Subjt:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETT--AVDVRPISSARNHEG-EKTRKADGEESIRRVMYLNCWGQG

KAG7034937.1 hypothetical protein SDJN02_01730, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-1453.93Show/hide
Query:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETT--AVDVRPISSARNHEG-EKTRKADGEESIRRVMYLNCWGQG
        MSYLG R+WM ASVAVV G QSDG H +++G++ L +N     AETT  AVD+R  S+A +H   +   K   +ES+RRVMY NCWGQG
Subjt:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETT--AVDVRPISSARNHEG-EKTRKADGEESIRRVMYLNCWGQG

TrEMBL top hitse value%identityAlignment
A0A0A0K6Z3 Uncharacterized protein1.1e-0846.81Show/hide
Query:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKT--------RKADGEESIRRVMYLNCWGQG
        MSYL  R+ M ASVAV QG    GH   S G+  LRQ  R+ ++   + D+RP+SS    EG  +        R A  E+S+RRVMYLNCWGQG
Subjt:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKT--------RKADGEESIRRVMYLNCWGQG

A0A0A0KAY5 Uncharacterized protein5.1e-1761.54Show/hide
Query:  MSY----LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKTRKADGEESIRRVMYLNCWGQG
        MSY    LGRRMWMTASVAVVQG QSD GHHEA+KGVI L Q LRV + E                 +  R+ADGEES+RRVMYLNCWGQG
Subjt:  MSY----LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKTRKADGEESIRRVMYLNCWGQG

A0A2J6L919 Uncharacterized protein2.0e-0841.11Show/hide
Query:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHE-----GEKTRKADGEESIRRVMYLNCWGQ
        MSYL  R+WMTA VAVV G  +D  H+   G+   +Q  +  T+ T   D+RP+S   + +     G + R    ++S+R+VMYLNCWGQ
Subjt:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHE-----GEKTRKADGEESIRRVMYLNCWGQ

A0A5A7SLJ2 Wound-responsive family protein1.1e-0846.81Show/hide
Query:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKT--------RKADGEESIRRVMYLNCWGQG
        MSYL  R+ M ASVAV QG    GH   S G+  LRQ  R+ ++   + D+RP+SS    EG  +        R A  E+S+RRVMYLNCWGQG
Subjt:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKT--------RKADGEESIRRVMYLNCWGQG

A0A5A7TY19 Wound-responsive family protein7.9e-2675.56Show/hide
Query:  MSY--LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEK-TRKADGEESIRRVMYLNCWGQG
        MSY  LGRRMWM ASVAVVQ  QSD GHHEA+KGV+ L Q LRVS+AETTAV++RPISSA N EGE   R+A+GEES+RRVMYLNCWGQG
Subjt:  MSY--LGRRMWMTASVAVVQGAQSD-GHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEK-TRKADGEESIRRVMYLNCWGQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28240.1 Wound-responsive family protein4.8e-0736.56Show/hide
Query:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSA-------RNHEGEKTRKADGEESIRRVMYLNCWGQG
        MSYL  ++WM AS   VQG    G    S      R   R+S+      D+RP+++A        + E  +T  +  +ES+R+VMYLNCW QG
Subjt:  MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSA-------RNHEGEKTRKADGEESIRRVMYLNCWGQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTATCTTGGTCGTCGGATGTGGATGACGGCGAGTGTAGCAGTAGTACAGGGGGCGCAATCGGACGGCCACCACGAGGCGAGCAAAGGAGTAATTTGTCTT
CGCCAAAACCTTAGGGTTTCGACTGCGGAAACAACCGCCGTAGATGTCCGGCCAATTTCAAGTGCGAGGAATCACGAGGGAGAGAAGACGAGGAAAGCCGATGGG
GAAGAGTCTATTCGACGAGTTATGTACTTGAACTGCTGGGGGCAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTATCTTGGTCGTCGGATGTGGATGACGGCGAGTGTAGCAGTAGTACAGGGGGCGCAATCGGACGGCCACCACGAGGCGAGCAAAGGAGTAATTTGTCTT
CGCCAAAACCTTAGGGTTTCGACTGCGGAAACAACCGCCGTAGATGTCCGGCCAATTTCAAGTGCGAGGAATCACGAGGGAGAGAAGACGAGGAAAGCCGATGGG
GAAGAGTCTATTCGACGAGTTATGTACTTGAACTGCTGGGGGCAGGGGTGA
Protein sequenceShow/hide protein sequence
MSYLGRRMWMTASVAVVQGAQSDGHHEASKGVICLRQNLRVSTAETTAVDVRPISSARNHEGEKTRKADGEESIRRVMYLNCWGQG