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Lsi10G008730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G008730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransposase_23 domain-containing protein
Genome locationchr10:12909057..12918474
RNA-Seq ExpressionLsi10G008730
SyntenyLsi10G008730
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020107842.1 uncharacterized protein LOC109723769 isoform X3 [Ananas comosus]1.1e-1228.03Show/hide
Query:  EGNTSNLEETNVDTEANLTVNGDIDVVDSSG-TRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIY
        + ++++  E  V  +A+   N  +D+ D  G TRK +G TR  D+ NL  G K++++ N   QP+K G   LG +LGT+ R  + C L+Y+ W+KVPN  
Subjt:  EGNTSNLEETNVDTEANLTVNGDIDVVDSSG-TRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIY

Query:  KEE------SKFVVKKD--IKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRD---QDEVQEILRYVKNKNLLI-------------------
        K E      +KF +  D  +   +               + KY IED   +   + +P++   Q  V  +  +   K+ L                    
Subjt:  KEE------SKFVVKKD--IKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRD---QDEVQEILRYVKNKNLLI-------------------

Query:  -------HVEEKKEELGRHPTRVEVFLAAHKLKDESYID
               H  EK+ +  R P R+E F   HK KD SYI+
Subjt:  -------HVEEKKEELGRHPTRVEVFLAAHKLKDESYID

XP_023914558.1 uncharacterized protein LOC112026107 [Quercus suber]3.7e-1325.85Show/hide
Query:  RHVVVTESGPLEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNY
        R  V+    P   + S+ E TN+          ++ + D +G R T+G TRMS+I NL +G+KV + FN   QP++        F+GT+ R  NLCP+NY
Subjt:  RHVVVTESGPLEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNY

Query:  DDWRKVPNIYKE------ESKFVVKKD------------------IKNGVC----HHYLESGVVINVIYEEKYDIEDECLK------YKPDNIPRDQ---
         +WRKVPN YKE      ESKF + K+                   +N  C     HY ES     ++ E    +  +         +  D + R +   
Subjt:  DDWRKVPNIYKE------ESKFVVKKD------------------IKNGVC----HHYLESGVVINVIYEEKYDIEDECLK------YKPDNIPRDQ---

Query:  --DEVQEILRYVKNKNLLIHVEEKKEELGRHPTRVEVFLAAHKLKDESYIDEEFAKVADQRENVSKTVVKTAAIKIFNTASTSDVLTTATYLPTFQNNLS
           + ++ +    +K+   H  +  ++ G  P R ++++  HK KD   ++E+    A ++ +  K ++   A  +   A+ S    +      F   + 
Subjt:  --DEVQEILRYVKNKNLLIHVEEKKEELGRHPTRVEVFLAAHKLKDESYIDEEFAKVADQRENVSKTVVKTAAIKIFNTASTSDVLTTATYLPTFQNNLS

Query:  QTKHG--LKVGMGPPEYPDSPTENS
        + KHG    +G GP     S ++NS
Subjt:  QTKHG--LKVGMGPPEYPDSPTENS

XP_030963612.1 uncharacterized protein LOC115984740 [Quercus lobata]1.1e-1226.27Show/hide
Query:  PLEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNI
        P   + S+ E TN+          D+ + D +G R T+G TRMS+I NL +G+KV + FN   QP++        F+GT+ R  NLCP++Y +WRKVPN 
Subjt:  PLEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNI

Query:  YKE------ESKF----------VVKKDIKNGV------------CHHYLESGVVINVIYEEKYDIEDECLKYKPDN-IPRDQDEVQEILRYVKNKNLLI
        YKE      ESKF          ++K+    G+              HY ES     ++ E    +  +      +    RD  E  +  +    K   +
Subjt:  YKE------ESKF----------VVKKDIKNGV------------CHHYLESGVVINVIYEEKYDIEDECLKYKPDN-IPRDQDEVQEILRYVKNKNLLI

Query:  HVEEKK----------EELGRHPTRVEVFLAAHKLKDESYIDEEFAKVADQRENVSKTVVKTAAIKIFNTASTSDVLTTATYLPTFQNNLSQTKHG--LK
        H    K          ++ G  P R ++++  HK KD   ++E+    A ++ +  K ++   A  +   A+ S   ++      F   + + KHG    
Subjt:  HVEEKK----------EELGRHPTRVEVFLAAHKLKDESYIDEEFAKVADQRENVSKTVVKTAAIKIFNTASTSDVLTTATYLPTFQNNLSQTKHG--LK

Query:  VGMGPPEYPDSPTENS
        +G GP     S ++NS
Subjt:  VGMGPPEYPDSPTENS

XP_030974373.1 uncharacterized protein LOC115994380 [Quercus lobata]1.3e-1339.83Show/hide
Query:  PLEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNI
        P   + S+ E TN+          ++ + D +G R T+G TRMS+I NL +G+KV + FN   QP++        F+GT+ R  NLCP++Y +WRKVPN 
Subjt:  PLEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNI

Query:  YKE------ESKFVVKKD
        YKE      ESKF + K+
Subjt:  YKE------ESKFVVKKD

XP_038699673.1 uncharacterized protein LOC119996968 [Tripterygium wilfordii]3.6e-1628.7Show/hide
Query:  LEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIY
        +E N  +   +  +    + V+G +D +D+ G ++T+G+TR++D+  L   Q+++V FN L QPIK     LG FL +I ++  LC L  DDWRK     
Subjt:  LEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIY

Query:  KEESKFVVKKDIKNGVCHHYLESGVVINVIYEEK----------YDIEDECLKYKPDNIPRDQDEVQEILRYVKNKNLLIH----------VEEKKEELG
         +E   VV+       C+ Y     +     + K          +DI +E ++ +P ++   Q +  EI    + K  + H           EE +E+ G
Subjt:  KEESKFVVKKDIKNGVCHHYLESGVVINVIYEEK----------YDIEDECLKYKPDNIPRDQDEVQEILRYVKNKNLLIH----------VEEKKEELG

Query:  RHPTRVEVFLAAHKLK
         +PTR ++FL  HK K
Subjt:  RHPTRVEVFLAAHKLK

TrEMBL top hitse value%identityAlignment
A0A6P5ERA3 uncharacterized protein LOC109708647 isoform X31.2e-1224.79Show/hide
Query:  ETNVDTEANLTVNGDIDVVDSSGTRKT-QGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIYK------E
        ++ +  +AN+  +  +++VD  G  +T +G TR  D+ +L  G+K+VV  N   QP+K     LG +LGT+ R  NLCP++Y  W+K+PN +K       
Subjt:  ETNVDTEANLTVNGDIDVVDSSGTRKT-QGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIYK------E

Query:  ESKFVV--KKDIKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRD---QDEVQEILRYVKNKNLLI--------------HV----------E
         SKF +  K+ +   +               + KY + D+  +     +P +   Q  +  +  +   K+ L               H           +
Subjt:  ESKFVV--KKDIKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRD---QDEVQEILRYVKNKNLLI--------------HV----------E

Query:  EKKEELGRHPTRVEVFLAAHKLKDESYIDEEFAKVADQ
        E ++E  R P+R++ F + HK KD +YI++   ++ ++
Subjt:  EKKEELGRHPTRVEVFLAAHKLKDESYIDEEFAKVADQ

A0A6P5EY17 uncharacterized protein LOC109708647 isoform X11.2e-1224.79Show/hide
Query:  ETNVDTEANLTVNGDIDVVDSSGTRKT-QGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIYK------E
        ++ +  +AN+  +  +++VD  G  +T +G TR  D+ +L  G+K+VV  N   QP+K     LG +LGT+ R  NLCP++Y  W+K+PN +K       
Subjt:  ETNVDTEANLTVNGDIDVVDSSGTRKT-QGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIYK------E

Query:  ESKFVV--KKDIKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRD---QDEVQEILRYVKNKNLLI--------------HV----------E
         SKF +  K+ +   +               + KY + D+  +     +P +   Q  +  +  +   K+ L               H           +
Subjt:  ESKFVV--KKDIKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRD---QDEVQEILRYVKNKNLLI--------------HV----------E

Query:  EKKEELGRHPTRVEVFLAAHKLKDESYIDEEFAKVADQ
        E ++E  R P+R++ F + HK KD +YI++   ++ ++
Subjt:  EKKEELGRHPTRVEVFLAAHKLKDESYIDEEFAKVADQ

A0A6P5GP49 uncharacterized protein LOC109723769 isoform X35.3e-1328.03Show/hide
Query:  EGNTSNLEETNVDTEANLTVNGDIDVVDSSG-TRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIY
        + ++++  E  V  +A+   N  +D+ D  G TRK +G TR  D+ NL  G K++++ N   QP+K G   LG +LGT+ R  + C L+Y+ W+KVPN  
Subjt:  EGNTSNLEETNVDTEANLTVNGDIDVVDSSG-TRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIY

Query:  KEE------SKFVVKKD--IKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRD---QDEVQEILRYVKNKNLLI-------------------
        K E      +KF +  D  +   +               + KY IED   +   + +P++   Q  V  +  +   K+ L                    
Subjt:  KEE------SKFVVKKD--IKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRD---QDEVQEILRYVKNKNLLI-------------------

Query:  -------HVEEKKEELGRHPTRVEVFLAAHKLKDESYID
               H  EK+ +  R P R+E F   HK KD SYI+
Subjt:  -------HVEEKKEELGRHPTRVEVFLAAHKLKDESYID

A0A6V7NPY8 Uncharacterized protein6.9e-1331.34Show/hide
Query:  EGNTSNLEETNVDTEANLTVNGDIDVVDSS-GTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWR------
        E N    E TNV+       N  ++++D     +K +G TR  D+  L  GQ++ VE+N   QPIK G   LG +LGT+ R  N+CP++Y  W+      
Subjt:  EGNTSNLEETNVDTEANLTVNGDIDVVDSS-GTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWR------

Query:  -KVPNIYKEESKFVVKKDIKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRDQDEVQEILRYVKNKNLLIHVEEKKEELGRHPTRVEVFLAAH
         KV  I    SKF +  D K       +E+ V+ +V  + K D + E LK K     R Q E+   +             E +++  R P R+E F+  H
Subjt:  -KVPNIYKEESKFVVKKDIKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRDQDEVQEILRYVKNKNLLIHVEEKKEELGRHPTRVEVFLAAH

Query:  KLKDESYIDEEFAKVAD
        K KD  YI++  +  A+
Subjt:  KLKDESYIDEEFAKVAD

Q04218 TNP16.9e-1332.35Show/hide
Query:  ESGPLEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQP-IKVGSNALGNFLGTIGRSCNLCPLNYDDWRK
        E+  L+ N++N+E  NV +E           V  +G +K +G T M  I   +   ++VV FN L QP  +  ++ L +FLGTI R+   CPLNY DWR 
Subjt:  ESGPLEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQP-IKVGSNALGNFLGTIGRSCNLCPLNYDDWRK

Query:  VPNIYKEESKFVVKK--DIKNGVCHHYLES---------GVVINVIYEEKYDIEDECLKYKPDNIPRDQ----------DEVQEILRYVKN---KNLLIH
        +PN+YKEE   VVK   +I  G   + LES           + +  ++    +E + L+  P  + +DQ          DE  +I    K    K L IH
Subjt:  VPNIYKEESKFVVKK--DIKNGVCHHYLES---------GVVINVIYEEKYDIEDECLKYKPDNIPRDQ----------DEVQEILRYVKN---KNLLIH

Query:  ----------VEEKKEELGRHPTRVEVFLAAHKLKDES
                   E  K+ LGRHPTR E+F   +   D S
Subjt:  ----------VEEKKEELGRHPTRVEVFLAAHKLKDES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G40087.1 Plant transposase (Ptta/En/Spm family)1.5e-0725Show/hide
Query:  TVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNS-LNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIYKE------ESKF-----V
        T    I+V+D  G    +G+   S  + + +  +V+V F+   NQPI      LG++L  +     L P+NY DWR V    K+      +SKF     +
Subjt:  TVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNS-LNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKVPNIYKE------ESKF-----V

Query:  VKKDIKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRDQ-------------DEVQEILRYVKNKNLLIHV----------EEKKEELGRHPT
        ++KD   G      +  V +    E K +  +E L+ +P+ +P DQ              ++QE     +  +++ H+          +E K + G+ P 
Subjt:  VKKDIKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRDQ-------------DEVQEILRYVKNKNLLIHV----------EEKKEELGRHPT

Query:  RVEVFLAAHKLKDESYIDEE
        R E F+ + K  D S++ +E
Subjt:  RVEVFLAAHKLKDESYIDEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTTGTCGTCATGTGGTGGTCACAGAGTCTGGTCCTTTAGAAGGAAACACTAGCAATTTAGAGGAAACTAATGTTGATACAGAAGCTAATTTGACAGTTAATGG
TGATATCGATGTAGTAGATTCATCTGGGACACGTAAGACACAAGGTCAAACACGCATGTCTGATATTTTGAACTTAAAAGAAGGTCAAAAGGTTGTAGTTGAATTTAATA
GTTTAAACCAACCTATAAAAGTTGGTTCGAATGCTTTGGGCAATTTCTTAGGGACTATTGGAAGAAGTTGCAATCTTTGTCCCCTAAATTATGATGATTGGAGAAAGGTG
CCCAATATTTACAAGGAGGAATCAAAATTCGTTGTTAAAAAAGACATAAAAAATGGTGTTTGTCATCATTATCTAGAAAGTGGGGTGGTTATAAATGTAATCTACGAGGA
AAAATATGATATCGAAGATGAATGCTTGAAATATAAACCTGATAACATACCTAGGGACCAAGACGAAGTGCAAGAAATATTGAGATACGTAAAAAACAAAAATTTACTCA
TTCATGTGGAAGAAAAAAAAGAAGAGTTGGGGAGACATCCCACCAGAGTAGAAGTCTTTCTAGCTGCTCATAAGCTAAAGGATGAAAGTTACATAGATGAGGAATTTGCT
AAAGTTGCTGATCAAAGGGAAAATGTATCCAAAACAGTTGTTAAAACTGCTGCAATAAAGATTTTCAACACAGCATCTACCAGCGATGTCCTAACCACTGCGACATATCT
CCCAACGTTTCAAAACAATTTAAGCCAAACTAAACACGGCCTAAAAGTCGGGATGGGTCCCCCCGAGTACCCTGATTCCCCGACGGAAAATTCTCGTCTCCATCCTTCCC
TTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTTGTCGTCATGTGGTGGTCACAGAGTCTGGTCCTTTAGAAGGAAACACTAGCAATTTAGAGGAAACTAATGTTGATACAGAAGCTAATTTGACAGTTAATGG
TGATATCGATGTAGTAGATTCATCTGGGACACGTAAGACACAAGGTCAAACACGCATGTCTGATATTTTGAACTTAAAAGAAGGTCAAAAGGTTGTAGTTGAATTTAATA
GTTTAAACCAACCTATAAAAGTTGGTTCGAATGCTTTGGGCAATTTCTTAGGGACTATTGGAAGAAGTTGCAATCTTTGTCCCCTAAATTATGATGATTGGAGAAAGGTG
CCCAATATTTACAAGGAGGAATCAAAATTCGTTGTTAAAAAAGACATAAAAAATGGTGTTTGTCATCATTATCTAGAAAGTGGGGTGGTTATAAATGTAATCTACGAGGA
AAAATATGATATCGAAGATGAATGCTTGAAATATAAACCTGATAACATACCTAGGGACCAAGACGAAGTGCAAGAAATATTGAGATACGTAAAAAACAAAAATTTACTCA
TTCATGTGGAAGAAAAAAAAGAAGAGTTGGGGAGACATCCCACCAGAGTAGAAGTCTTTCTAGCTGCTCATAAGCTAAAGGATGAAAGTTACATAGATGAGGAATTTGCT
AAAGTTGCTGATCAAAGGGAAAATGTATCCAAAACAGTTGTTAAAACTGCTGCAATAAAGATTTTCAACACAGCATCTACCAGCGATGTCCTAACCACTGCGACATATCT
CCCAACGTTTCAAAACAATTTAAGCCAAACTAAACACGGCCTAAAAGTCGGGATGGGTCCCCCCGAGTACCCTGATTCCCCGACGGAAAATTCTCGTCTCCATCCTTCCC
TTTAG
Protein sequenceShow/hide protein sequence
MESCRHVVVTESGPLEGNTSNLEETNVDTEANLTVNGDIDVVDSSGTRKTQGQTRMSDILNLKEGQKVVVEFNSLNQPIKVGSNALGNFLGTIGRSCNLCPLNYDDWRKV
PNIYKEESKFVVKKDIKNGVCHHYLESGVVINVIYEEKYDIEDECLKYKPDNIPRDQDEVQEILRYVKNKNLLIHVEEKKEELGRHPTRVEVFLAAHKLKDESYIDEEFA
KVADQRENVSKTVVKTAAIKIFNTASTSDVLTTATYLPTFQNNLSQTKHGLKVGMGPPEYPDSPTENSRLHPSL