; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G008990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G008990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:13310553..13310969
RNA-Seq ExpressionLsi10G008990
SyntenyLsi10G008990
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646853.1 hypothetical protein Csa_020628 [Cucumis sativus]1.9e-3168.57Show/hide
Query:  KSRQKEGRRKE-----PKLWPQLALLLLGCTSGAILFGLVLQNGT-SLVVVGGLLV-----SAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRK
        K+ QKE R KE     PK WP L LLLLGCT G+ILFG V QN + S+VVVGGL+V      AVAVAVIG AGLVTWITV+V L LIGRSRRRLVAEGRK
Subjt:  KSRQKEGRRKE-----PKLWPQLALLLLGCTSGAILFGLVLQNGT-SLVVVGGLLV-----SAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRK

Query:  ISKEIMVGLVVKVLLKEANVLGAISAAVLGYLAFAWGPLL
        ISKE+MVG +V+VLLKE NVLGAISAAV GYL    G ++
Subjt:  ISKEIMVGLVVKVLLKEANVLGAISAAVLGYLAFAWGPLL

XP_022947668.1 uncharacterized protein LOC111451463 [Cucurbita moschata]6.0e-2264Show/hide
Query:  EGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLL
        EG RK P   PQL    LGC  G + F LV L +  +LVVVGGLL   V +A+  AA +VTWITV+V L LIGRSRRR+VAEGRKISKEIMVGLVVKVLL
Subjt:  EGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLL

Query:  KEANVLGAISAAVLGYLAFAWGPLL
        KE  VLG +  AVL  LA AWGP L
Subjt:  KEANVLGAISAAVLGYLAFAWGPLL

XP_022970724.1 uncharacterized protein LOC111469624 [Cucurbita maxima]8.4e-2465.35Show/hide
Query:  QKEGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKV
        Q EG RK P   PQL    LGC  G + F LV L +  SLVVVGGLL   V +A+  AA +VTWITV+VLL LIGRSRRR+VAEGRKISKEIMVGLVVKV
Subjt:  QKEGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKV

Query:  LLKEANVLGAISAAVLGYLAFAWGPLL
        LLKE  VLG +  A LG LA AWGP L
Subjt:  LLKEANVLGAISAAVLGYLAFAWGPLL

XP_023534045.1 uncharacterized protein LOC111795714 [Cucurbita pepo subsp. pepo]3.2e-2364.8Show/hide
Query:  EGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLL
        EG RK P   PQL    LGC  G + F LV L +  +LVVVGGLLVS   +A+  AA +VTWITV+V L LIGRSR+R+VAEGRKISKEIMVGLVVKVLL
Subjt:  EGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLL

Query:  KEANVLGAISAAVLGYLAFAWGPLL
        KE  VLG +  AVLG LA AWGP L
Subjt:  KEANVLGAISAAVLGYLAFAWGPLL

XP_038902352.1 uncharacterized protein LOC120088986 [Benincasa hispida]4.9e-4081.4Show/hide
Query:  PKLWPQLALLLLGCTSGAILFGLVLQNG----TSLVVVGGLLVSAVAVAVIGAA--GLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLK
        PKLWP LALLLLG TSGAILFGLV QNG    T++V++GGLL+SAVAVAV+ AA   LVTWITVMVLLSLIGR+RRRLVAEG+KISKEIMVG VVKVLLK
Subjt:  PKLWPQLALLLLGCTSGAILFGLVLQNG----TSLVVVGGLLVSAVAVAVIGAA--GLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLK

Query:  EANVLGAISAAVLGYLAFAWGPLLFLPIP
        E NV+GAISAAVLGYLAFAWGPLLF P P
Subjt:  EANVLGAISAAVLGYLAFAWGPLLFLPIP

TrEMBL top hitse value%identityAlignment
A0A0A0KE95 Uncharacterized protein9.1e-3268.57Show/hide
Query:  KSRQKEGRRKE-----PKLWPQLALLLLGCTSGAILFGLVLQNGT-SLVVVGGLLV-----SAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRK
        K+ QKE R KE     PK WP L LLLLGCT G+ILFG V QN + S+VVVGGL+V      AVAVAVIG AGLVTWITV+V L LIGRSRRRLVAEGRK
Subjt:  KSRQKEGRRKE-----PKLWPQLALLLLGCTSGAILFGLVLQNGT-SLVVVGGLLV-----SAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRK

Query:  ISKEIMVGLVVKVLLKEANVLGAISAAVLGYLAFAWGPLL
        ISKE+MVG +V+VLLKE NVLGAISAAV GYL    G ++
Subjt:  ISKEIMVGLVVKVLLKEANVLGAISAAVLGYLAFAWGPLL

A0A2N9F0Z5 Uncharacterized protein9.1e-0856.58Show/hide
Query:  GLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGYLA
        G+L    A+AV+  A LVTWITVMVLL+  G+ +R LV EGR ++KEI VG ++K+LLKE NV+ A+  AVLGY A
Subjt:  GLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGYLA

A0A5N6RDW9 Uncharacterized protein1.8e-0858.02Show/hide
Query:  LVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGYLA
        L  V GLL    A+AV+  A LVTWITV+VLL+  G+ RR LV EGRKI++EI VG V+K+LLKE N++ A+  AVLGY A
Subjt:  LVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGYLA

A0A6J1G791 uncharacterized protein LOC1114514632.9e-2264Show/hide
Query:  EGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLL
        EG RK P   PQL    LGC  G + F LV L +  +LVVVGGLL   V +A+  AA +VTWITV+V L LIGRSRRR+VAEGRKISKEIMVGLVVKVLL
Subjt:  EGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLL

Query:  KEANVLGAISAAVLGYLAFAWGPLL
        KE  VLG +  AVL  LA AWGP L
Subjt:  KEANVLGAISAAVLGYLAFAWGPLL

A0A6J1I6G7 uncharacterized protein LOC1114696244.1e-2465.35Show/hide
Query:  QKEGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKV
        Q EG RK P   PQL    LGC  G + F LV L +  SLVVVGGLL   V +A+  AA +VTWITV+VLL LIGRSRRR+VAEGRKISKEIMVGLVVKV
Subjt:  QKEGRRKEPKLWPQLALLLLGCTSGAILFGLV-LQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKV

Query:  LLKEANVLGAISAAVLGYLAFAWGPLL
        LLKE  VLG +  A LG LA AWGP L
Subjt:  LLKEANVLGAISAAVLGYLAFAWGPLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03730.1 unknown protein9.0e-0850.63Show/hide
Query:  LVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGY
        L  V G +    A AV   A +V WI+V+VLL+  G+SRR LV E RKI++E+  G V KVLLKE N + A+  AVLGY
Subjt:  LVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGY

AT4G03600.1 unknown protein2.4e-0853.01Show/hide
Query:  VVVGGL-----LVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGY
        VV+G +     +V+A+ VAV   A +V WI+V+VLL+  G+SRR LV EGRKI++E+ VG V KVLLKE NV+ A   AVL Y
Subjt:  VVVGGL-----LVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGY

AT4G28330.1 unknown protein1.3e-0645.12Show/hide
Query:  LVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGYLAF
        L  V G+L  A A+ +   A +V WI+V+V ++  G+SR+R+V EGRK++KEI  G V +VLLKE N + A+  A+L Y  F
Subjt:  LVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGYLAF

AT4G28340.1 unknown protein2.5e-0543.9Show/hide
Query:  LVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGYLAF
        L  V G+L  A A+ +   A +V WI+V+V ++   +SR+++V EGRK++KEI  G V KVLLKE N + A+  AV+ Y  F
Subjt:  LVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKEANVLGAISAAVLGYLAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTAGAGAAATCAAGGCAGAAGGAAGGAAGAAGAAAGGAGCCAAAACTATGGCCTCAGCTAGCTCTACTACTCTTAGGCTGTACTTCTGGTGCCATTCTATTTGG
TTTGGTGTTGCAAAATGGCACTAGTTTGGTTGTGGTTGGTGGTTTGTTGGTTTCGGCGGTGGCCGTGGCGGTTATTGGTGCGGCGGGTTTGGTGACGTGGATCACAGTTA
TGGTTCTATTGTCCTTGATCGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGAGATAATGGTGGGGCTTGTGGTGAAGGTTTTGTTGAAGGAA
GCCAATGTTTTGGGTGCTATTTCGGCTGCTGTTTTGGGTTACTTGGCCTTTGCTTGGGGTCCATTATTGTTTCTTCCTATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTAGAGAAATCAAGGCAGAAGGAAGGAAGAAGAAAGGAGCCAAAACTATGGCCTCAGCTAGCTCTACTACTCTTAGGCTGTACTTCTGGTGCCATTCTATTTGG
TTTGGTGTTGCAAAATGGCACTAGTTTGGTTGTGGTTGGTGGTTTGTTGGTTTCGGCGGTGGCCGTGGCGGTTATTGGTGCGGCGGGTTTGGTGACGTGGATCACAGTTA
TGGTTCTATTGTCCTTGATCGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGAGATAATGGTGGGGCTTGTGGTGAAGGTTTTGTTGAAGGAA
GCCAATGTTTTGGGTGCTATTTCGGCTGCTGTTTTGGGTTACTTGGCCTTTGCTTGGGGTCCATTATTGTTTCTTCCTATTCCATAA
Protein sequenceShow/hide protein sequence
MEVEKSRQKEGRRKEPKLWPQLALLLLGCTSGAILFGLVLQNGTSLVVVGGLLVSAVAVAVIGAAGLVTWITVMVLLSLIGRSRRRLVAEGRKISKEIMVGLVVKVLLKE
ANVLGAISAAVLGYLAFAWGPLLFLPIP