; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G009160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G009160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNusB domain-containing protein
Genome locationchr10:13632658..13643296
RNA-Seq ExpressionLsi10G009160
SyntenyLsi10G009160
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0031564 - transcription antitermination (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR006027 - NusB/RsmB/TIM44
IPR011605 - NusB antitermination factor
IPR035926 - NusB-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040119.1 NusB/RsmB/TIM44 [Cucumis melo var. makuwa]2.7e-13889.32Show/hide
Query:  MPNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPV
        +PNFHFS HISG+C+FPF ASSIVPHV++SMP L  QASL+ STSF EN VAEER+SI+VSS+ETIPK+DKSGKFCSPRAARELALSIVYAACLEGSDPV
Subjt:  MPNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIP
        RLFEKRLN+RRESGYEFDKTSLMEYNHMSFGGPPV+VET+EEADELLRKDE+DSTIEAEILAAPPK+VYSKLILRFTRKLLVAVVDGWD+R LKIEKVIP
Subjt:  RLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIP

Query:  PTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA
        PTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DS+ AREK EV A
Subjt:  PTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA

XP_004149639.3 uncharacterized protein LOC101216754 isoform X1 [Cucumis sativus]2.7e-13890.91Show/hide
Query:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
        PNFHFSYHISG+C+FPF ASSIVPH++DSMP    QASL+ STSFSEN VAEER+SI++SS+E IPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
Subjt:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR

Query:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
        LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPV+VET+EEADELLRKDE+DSTIEAEILAAPPK+VYSKLILRFTRKLLVAV DGWDSR LKIEKVIPP
Subjt:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP

Query:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREK
        TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDS  AREK
Subjt:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREK

XP_008449897.1 PREDICTED: uncharacterized protein LOC103491638 isoform X1 [Cucumis melo]6.1e-13889.64Show/hide
Query:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
        PNFHFS HISG+C+FPF ASSIVPHV++SMP L  QASL+ STSF EN VAEER+SI+VSS+ETIPK+DKSGKFCSPRAARELALSIVYAACLEGSDPVR
Subjt:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR

Query:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
        LFEKRLN+RRESGYEFDKTSLMEYNHMSFGGPPV+VET+EEADELLRKDE+DSTIEAEILAAPPK+VYSKLILRFTRKLLVAVVDGWD+R LKIEKVIPP
Subjt:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP

Query:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA
        TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DS+ AREK EV A
Subjt:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA

XP_038901769.1 uncharacterized protein LOC120088495 isoform X1 [Benincasa hispida]4.5e-14192.5Show/hide
Query:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
        PNFHFS HISG+CRFPFRASSIVPHV+DSM HL PQASL+ STSF EN VAE+R+SI+VSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
Subjt:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR

Query:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
        LFEKRLN RRE GYEFDKTSLMEYNHMSFGGPPV+VETVEEADELLRKDEKDS IEAEILAAPPK+VYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
Subjt:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP

Query:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA
        TWK+KPA RILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREK EV A
Subjt:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA

XP_038901770.1 uncharacterized protein LOC120088495 isoform X2 [Benincasa hispida]4.5e-14192.5Show/hide
Query:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
        PNFHFS HISG+CRFPFRASSIVPHV+DSM HL PQASL+ STSF EN VAE+R+SI+VSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
Subjt:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR

Query:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
        LFEKRLN RRE GYEFDKTSLMEYNHMSFGGPPV+VETVEEADELLRKDEKDS IEAEILAAPPK+VYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
Subjt:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP

Query:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA
        TWK+KPA RILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREK EV A
Subjt:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ5 NusB domain-containing protein1.3e-13890.91Show/hide
Query:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
        PNFHFSYHISG+C+FPF ASSIVPH++DSMP    QASL+ STSFSEN VAEER+SI++SS+E IPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
Subjt:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR

Query:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
        LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPV+VET+EEADELLRKDE+DSTIEAEILAAPPK+VYSKLILRFTRKLLVAV DGWDSR LKIEKVIPP
Subjt:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP

Query:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREK
        TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDS  AREK
Subjt:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREK

A0A1S3BNR2 uncharacterized protein LOC103491638 isoform X13.0e-13889.64Show/hide
Query:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
        PNFHFS HISG+C+FPF ASSIVPHV++SMP L  QASL+ STSF EN VAEER+SI+VSS+ETIPK+DKSGKFCSPRAARELALSIVYAACLEGSDPVR
Subjt:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR

Query:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
        LFEKRLN+RRESGYEFDKTSLMEYNHMSFGGPPV+VET+EEADELLRKDE+DSTIEAEILAAPPK+VYSKLILRFTRKLLVAVVDGWD+R LKIEKVIPP
Subjt:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP

Query:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA
        TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DS+ AREK EV A
Subjt:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA

A0A1S4DXQ5 uncharacterized protein LOC103491638 isoform X23.0e-13889.64Show/hide
Query:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
        PNFHFS HISG+C+FPF ASSIVPHV++SMP L  QASL+ STSF EN VAEER+SI+VSS+ETIPK+DKSGKFCSPRAARELALSIVYAACLEGSDPVR
Subjt:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR

Query:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
        LFEKRLN+RRESGYEFDKTSLMEYNHMSFGGPPV+VET+EEADELLRKDE+DSTIEAEILAAPPK+VYSKLILRFTRKLLVAVVDGWD+R LKIEKVIPP
Subjt:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP

Query:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA
        TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DS+ AREK EV A
Subjt:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA

A0A5A7TFT7 NusB/RsmB/TIM441.3e-13889.32Show/hide
Query:  MPNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPV
        +PNFHFS HISG+C+FPF ASSIVPHV++SMP L  QASL+ STSF EN VAEER+SI+VSS+ETIPK+DKSGKFCSPRAARELALSIVYAACLEGSDPV
Subjt:  MPNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIP
        RLFEKRLN+RRESGYEFDKTSLMEYNHMSFGGPPV+VET+EEADELLRKDE+DSTIEAEILAAPPK+VYSKLILRFTRKLLVAVVDGWD+R LKIEKVIP
Subjt:  RLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIP

Query:  PTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA
        PTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DS+ AREK EV A
Subjt:  PTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA

A0A5D3DDJ4 NusB/RsmB/TIM443.0e-13889.64Show/hide
Query:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR
        PNFHFS HISG+C+FPF ASSIVPHV++SMP L  QASL+ STSF EN VAEER+SI+VSS+ETIPK+DKSGKFCSPRAARELALSIVYAACLEGSDPVR
Subjt:  PNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVR

Query:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP
        LFEKRLN+RRESGYEFDKTSLMEYNHMSFGGPPV+VET+EEADELLRKDE+DSTIEAEILAAPPK+VYSKLILRFTRKLLVAVVDGWD+R LKIEKVIPP
Subjt:  LFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPP

Query:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA
        TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DS+ AREK EV A
Subjt:  TWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA

SwissProt top hitse value%identityAlignment
A6QBK6 Transcription antitermination protein NusB1.4e-0437.35Show/hide
Query:  FTRKLLVAVVDGWDSRVLKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL
        F+  L    ++  +    +IEK +   W     GR+ E  IL L   EI V  T   I+INEAV+LAK   D  +P+ ING L
Subjt:  FTRKLLVAVVDGWDSRVLKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL

A7GWZ7 Transcription antitermination protein NusB1.7e-0535.37Show/hide
Query:  VAVVDGWDSRVLK---IEKVIPPTWKNKPAGR--ILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL
        +  ++ +D+  LK   +++++ P  K K   R  I+EL IL L + E+   GT   ++INEA++LAK     +AP+ ING L
Subjt:  VAVVDGWDSRVLK---IEKVIPPTWKNKPAGR--ILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCL

B1WXY6 Transcription antitermination protein NusB4.9e-0543.75Show/hide
Query:  WKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIK
        W+ K   +I +  IL LA++EI  +    ++ INEAV+LAKR+ D    R ING LR F   IK
Subjt:  WKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIK

Q18B61 Transcription antitermination protein NusB2.6e-0639.19Show/hide
Query:  KIEKVIPPTWKNKPAGRI--LELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI
        KI+++I    KN    R+  +++ IL L++ EI  + T +++ INEAV+LAK +CD  +P+ ING L + V +I
Subjt:  KIEKVIPPTWKNKPAGRI--LELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI

Q7MAE9 Transcription antitermination protein NusB1.1e-0430.77Show/hide
Query:  KLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPPTWKNKPAGRI--LELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVK
        +L+  K I    ++  + + DG  + + +I++ I    K     RI  +E  IL L   EI   G    ++INEAV+L+K F +  +PR +NG L     
Subjt:  KLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPPTWKNKPAGRI--LELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVK

Query:  DIKE
        D+K+
Subjt:  DIKE

Arabidopsis top hitse value%identityAlignment
AT4G26370.1 antitermination NusB domain-containing protein5.6e-8975.24Show/hide
Query:  IPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPP
        +PK+DKSG+  SPRAARELAL I+YAACLEGSDP+RLFEKR+NARRE GYEFDK+SL+EYNHMSFGGPPV  ET EE DEL+R DEK+S IEAE+L+APP
Subjt:  IPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPP

Query:  KLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI
        KLVYSKL+LRF +KLL AVVD WDS V+ IEK+ PP WK+ PAGRILE  ILHLAMSE+ V+ TRH IVINEAVDLAKRFCDG+APRIINGCLRTFVKD 
Subjt:  KLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI

Query:  KEIDSSHARE
            +  A E
Subjt:  KEIDSSHARE

AT4G26370.2 antitermination NusB domain-containing protein1.4e-3673.96Show/hide
Query:  IPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEIL
        +PK+DKSG+  SPRAARELAL I+YAACLEGSDP+RLFEKR+NARRE GYEFDK+SL+EYNHMSFGGPPV  ET EE DEL+R DEK+S I   ++
Subjt:  IPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAATTTTCATTTCTCCTACCACATTTCTGGAGTATGTCGGTTCCCATTTCGTGCTAGTTCAATCGTTCCCCACGTAGAAGATTCCATGCCACACCTCGGCCCTCA
AGCCTCGCTTCAGTTTTCTACTTCTTTTTCTGAAAATAGTGTGGCTGAAGAGAGGAATTCTATTGCAGTTTCTTCCGTTGAAACAATTCCAAAGGTCGACAAGAGCGGCA
AATTTTGTAGCCCCAGAGCTGCTAGAGAGCTCGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCTGATCCCGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGA
CGAGAATCGGGATATGAATTTGACAAGACATCATTGATGGAATATAATCATATGAGCTTTGGAGGCCCGCCAGTTTCCGTGGAAACAGTTGAAGAAGCAGATGAGCTTTT
ACGTAAAGACGAAAAGGATTCTACAATTGAGGCAGAAATCCTCGCAGCCCCACCAAAGCTGGTCTACAGCAAACTGATCTTACGGTTTACACGAAAACTTTTGGTTGCAG
TTGTGGACGGATGGGACAGTCGTGTGCTTAAAATTGAAAAAGTCATTCCTCCAACTTGGAAGAACAAGCCAGCAGGACGGATTCTAGAGCTTTGTATTCTCCACCTGGCC
ATGTCTGAAATAACGGTTATTGGAACAAGACATCAAATTGTCATTAATGAGGCCGTTGATCTTGCAAAACGATTCTGTGATGGAGCAGCACCCCGTATTATTAATGGATG
CCTTAGGACCTTTGTAAAGGACATCAAAGAAATTGATTCAAGTCATGCTCGAGAGAAGATAGAAGTCTGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATCCGATTTTGTTATTTAGGACCAAAGAAATTCCAAGAGGGAAGAGCAGAGAAGGAAGGCTGAGTCCAATCTCACAGAAATGCATTTACCTCCGACTCCAATTCTCCTCT
GAGCTGAAGAATTTTGATTTCTTCCACAATGCCTAATTTTCATTTCTCCTACCACATTTCTGGAGTATGTCGGTTCCCATTTCGTGCTAGTTCAATCGTTCCCCACGTAG
AAGATTCCATGCCACACCTCGGCCCTCAAGCCTCGCTTCAGTTTTCTACTTCTTTTTCTGAAAATAGTGTGGCTGAAGAGAGGAATTCTATTGCAGTTTCTTCCGTTGAA
ACAATTCCAAAGGTCGACAAGAGCGGCAAATTTTGTAGCCCCAGAGCTGCTAGAGAGCTCGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCTGATCCCGTTCG
GCTCTTCGAGAAGCGGTTGAATGCCCGACGAGAATCGGGATATGAATTTGACAAGACATCATTGATGGAATATAATCATATGAGCTTTGGAGGCCCGCCAGTTTCCGTGG
AAACAGTTGAAGAAGCAGATGAGCTTTTACGTAAAGACGAAAAGGATTCTACAATTGAGGCAGAAATCCTCGCAGCCCCACCAAAGCTGGTCTACAGCAAACTGATCTTA
CGGTTTACACGAAAACTTTTGGTTGCAGTTGTGGACGGATGGGACAGTCGTGTGCTTAAAATTGAAAAAGTCATTCCTCCAACTTGGAAGAACAAGCCAGCAGGACGGAT
TCTAGAGCTTTGTATTCTCCACCTGGCCATGTCTGAAATAACGGTTATTGGAACAAGACATCAAATTGTCATTAATGAGGCCGTTGATCTTGCAAAACGATTCTGTGATG
GAGCAGCACCCCGTATTATTAATGGATGCCTTAGGACCTTTGTAAAGGACATCAAAGAAATTGATTCAAGTCATGCTCGAGAGAAGATAGAAGTCTGTGCATGACCCTGA
ACTTTTGGGGTGCCTCAGGACCTTTGTAAGGATATCGAAGAATTTGACTCAACTCATGCTGTAGCTCAAGTAAGTGATTTGGGGGTACGTTTATTAAACTTGTTGCTGTC
AACCGCAGCTAACGTGAAGTGATTTGAAGAATCTCATACTTGCCGCAAACCACAGCAAGAATTTATTTCCCTTTCCCCCCTGTAGGCGTGGATTTCTGTTATATCCATCT
ATTCAGAGTTGAGTAATGAGGTGCATGATGTGTGAGAGAATAAGTTGTCAAATTAATCTAGTACTGGAAATTTTGTATTGGAAACTTCAATCTATTTGGTATTGGAAACT
TCAATCTATTTTTGCCATCCAACGTCTGATACTACTTAGGTAGCTATAGTGTTTTGTATCGGCAATAAAAGAAAGTACTGTGAATTTTTGTAGTTATTCTTTGCTTTTAA
GTTTTAACTGCCTGTTATGTATATTTAGCCCCACTTTAAGGAGCTCTTATGTGTGTTGATATTTTAGAATTCACTATTCAAACCCTGTATTCGAGCAATTTTGCTGAGAG
AATTTTGATTTTCATAAGTTTTCAGCAACGGAGTTGAATGTAGCAATGAATTAAGGTTTGTTCTTTCGAACAATTTTTTTAAGGACTATATAGAATTTATAAAATTAACT
GAGTGTATCCACATTACATTTGGGAATCCCAGTGTGATAGTAAGGTAATAGAAACGTGTAAAAGTTTTCCAATTCTGGTGAACTTTTAATGTCTTCTAGATGTGTTTCTA
CAAGGAGC
Protein sequenceShow/hide protein sequence
MPNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLGPQASLQFSTSFSENSVAEERNSIAVSSVETIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNAR
RESGYEFDKTSLMEYNHMSFGGPPVSVETVEEADELLRKDEKDSTIEAEILAAPPKLVYSKLILRFTRKLLVAVVDGWDSRVLKIEKVIPPTWKNKPAGRILELCILHLA
MSEITVIGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSSHAREKIEVCA