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Lsi10G009200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G009200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:13674738..13674992
RNA-Seq ExpressionLsi10G009200
SyntenyLsi10G009200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040112.1 hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa]3.7e-3088.89Show/hide
Query:  SSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYNYASD
        ++LIVLSVAHLSAD SQ IARFPD LTSHQLLYLLF FPLQQLSRLALSLWTFFCVPPPGSFYYYY SSDSD+SSY YASD
Subjt:  SSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYNYASD

KAF3966134.1 hypothetical protein CMV_009733 [Castanea mollissima]1.1e-1873.08Show/hide
Query:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFY---YYYSSSDSD
        MVF+SL+VLSVAHLSADA QCIA  P+RL+SHQLL L+  FPLQQL RLAL LWTF C+PPP SFY   YY SSS SD
Subjt:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFY---YYYSSSDSD

PON98040.1 hypothetical protein TorRG33x02_061140 [Trema orientale]1.2e-2073.08Show/hide
Query:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS
        MVF+SL+VLSVAH+SADA QC+A FP+RL+SHQLL L+F FPLQQL RLAL LWTF C+PPP SFY Y  SSDSD  S
Subjt:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS

XP_022153861.1 uncharacterized protein LOC111021275 [Momordica charantia]8.7e-3292.5Show/hide
Query:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYN
        MVFSSLIVLSVAHLSADASQCIA FPDRLTSHQLLYLLFGFPLQQLSRLALS WTFFCVPPPGSFYYYY SSDSD SS++
Subjt:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYN

XP_022958637.1 uncharacterized protein LOC111459803 [Cucurbita moschata]2.6e-2887.18Show/hide
Query:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS
        MVF+SLIVLSVAHLSADASQCIAR PDRLTSHQLLY+LF +PLQQLSRLALS+WTF CVPPPGSFYYYY SSD D SS
Subjt:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS

TrEMBL top hitse value%identityAlignment
A0A0A0L0B8 Uncharacterized protein5.2e-3091.03Show/hide
Query:  IVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYNYASD
        IVLSVAHLSADASQ IARFPD LTSHQLLYLLF FPLQQLSRLALSLWT FCVPPPGSFYYYY SSDSD+SSY+YASD
Subjt:  IVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYNYASD

A0A2P5FJR7 Uncharacterized protein5.7e-2173.08Show/hide
Query:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS
        MVF+SL+VLSVAH+SADA QC+A FP+RL+SHQLL L+F FPLQQL RLAL LWTF C+PPP SFY Y  SSDSD  S
Subjt:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS

A0A5A7T9K4 Uncharacterized protein1.8e-3088.89Show/hide
Query:  SSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYNYASD
        ++LIVLSVAHLSAD SQ IARFPD LTSHQLLYLLF FPLQQLSRLALSLWTFFCVPPPGSFYYYY SSDSD+SSY YASD
Subjt:  SSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYNYASD

A0A6J1DKC2 uncharacterized protein LOC1110212754.2e-3292.5Show/hide
Query:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYN
        MVFSSLIVLSVAHLSADASQCIA FPDRLTSHQLLYLLFGFPLQQLSRLALS WTFFCVPPPGSFYYYY SSDSD SS++
Subjt:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYN

A0A6J1H2D5 uncharacterized protein LOC1114598031.3e-2887.18Show/hide
Query:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS
        MVF+SLIVLSVAHLSADASQCIAR PDRLTSHQLLY+LF +PLQQLSRLALS+WTF CVPPPGSFYYYY SSD D SS
Subjt:  MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55365.1 unknown protein2.9e-0945Show/hide
Query:  MVFSSLIVLSVAHLSADASQCIARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS
        MVF+S +V++VA +S D  Q I R P   R+ + QL  +   FP+ QLSR  L LWTF C+P   SFY Y   + S  SS
Subjt:  MVFSSLIVLSVAHLSADASQCIARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSS

AT5G56520.1 unknown protein5.0e-0942.35Show/hide
Query:  MVFSSLIVLSVAHLSADASQCIARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYNYAS
        MVF    V+SVAH+SA+  Q +   P  DR++S ++L L+  FPLQQL R  L  W + CVPPP    Y+    D D   Y  +S
Subjt:  MVFSSLIVLSVAHLSADASQCIARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYNYAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTTAGCAGCTTAATTGTGTTATCGGTCGCTCATTTATCGGCTGATGCTTCGCAATGCATTGCTCGCTTTCCAGATCGCCTTACGAGTCACCAACTCCTTTACCT
TCTCTTCGGTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTCTTCTGTGTTCCACCTCCTGGTTCCTTCTACTATTACTACTCCTCCTCTGATT
CCGATGTCTCTTCTTACAACTACGCTTCCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATTTAGCAGCTTAATTGTGTTATCGGTCGCTCATTTATCGGCTGATGCTTCGCAATGCATTGCTCGCTTTCCAGATCGCCTTACGAGTCACCAACTCCTTTACCT
TCTCTTCGGTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTCTTCTGTGTTCCACCTCCTGGTTCCTTCTACTATTACTACTCCTCCTCTGATT
CCGATGTCTCTTCTTACAACTACGCTTCCGATTGA
Protein sequenceShow/hide protein sequence
MVFSSLIVLSVAHLSADASQCIARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFFCVPPPGSFYYYYSSSDSDVSSYNYASD