CuGenDBv2

Gene ID	Lsi10G009400
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	chr10:13831004..13836249
RNA-Seq Expression	Lsi10G009400
Synteny	Lsi10G009400
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0006310 - DNA recombination (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0016740 - transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8649414.1 hypothetical protein Csa_021680 [Cucumis sativus]

7.1e-132

73.53

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FHL+F +ITGKTPDNDQQ+FNSYLLTINK LSFAQFELRGCRNQYDGRVYYGLVN VSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQV-----IPPAFKNFSISLKEKTIAELAQDKWLNCTP
        +KAIVEAIAQD SA+GGISNI+ALNLQLENQAFD     +  K+++  +K SS   LYQ    ++     +P AFKNFS S KEKTIAELAQDKWL+CTP
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQV-----IPPAFKNFSISLKEKTIAELAQDKWLNCTP

Query:  DGFVNLG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSH
        DGFVNLG                            AELC++E CTVRVH+YCLKKMLSNKKSK+ACPGCG RW+ST SNIEP+EEEDEPDTRTQDQPSSH
Subjt:  DGFVNLG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSH

Query:  KRKKSRLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR
        KRKKSRLN+DIDLGPNEDSTAEASQPP +RR TRSSARQR
Subjt:  KRKKSRLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR

XP_008449859.1 PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo]

3.7e-128

73.81

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Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FHL+F RITGKTPDNDQQ+FNSYLLTINK LSFAQFELRGCRNQYDGRVYYGLVN VSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN
        +KAIVEAIAQDPSA+GGISNI+ALNLQLENQ  D                           QSQVIP AFKNFS S KEKTIAELAQDKWL+CTP+GFVN
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN

Query:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS
        LG                            AELC+SE CTVRVHRYCLKKMLSNKKSKRACPGCG RW+ST SNIE +EE DEPDTRTQDQPSSHKRKKS
Subjt:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS

Query:  RLNIDIDLGPNEDSTAEASQ-PPDSRRATRSSARQR
        +LN+DIDLGPNEDSTAEASQ PPD+RRATR+S RQR
Subjt:  RLNIDIDLGPNEDSTAEASQ-PPDSRRATRSSARQR

XP_031740711.1 non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus]

7.1e-132

73.53

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Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FHL+F +ITGKTPDNDQQ+FNSYLLTINK LSFAQFELRGCRNQYDGRVYYGLVN VSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQV-----IPPAFKNFSISLKEKTIAELAQDKWLNCTP
        +KAIVEAIAQD SA+GGISNI+ALNLQLENQAFD     +  K+++  +K SS   LYQ    ++     +P AFKNFS S KEKTIAELAQDKWL+CTP
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQV-----IPPAFKNFSISLKEKTIAELAQDKWLNCTP

Query:  DGFVNLG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSH
        DGFVNLG                            AELC++E CTVRVH+YCLKKMLSNKKSK+ACPGCG RW+ST SNIEP+EEEDEPDTRTQDQPSSH
Subjt:  DGFVNLG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSH

Query:  KRKKSRLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR
        KRKKSRLN+DIDLGPNEDSTAEASQPP +RR TRSSARQR
Subjt:  KRKKSRLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR

XP_038900598.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida]

5.8e-134

77.31

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Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQALLARGPLREDHFHL+FTRITGKTPDNDQQLFNSYLLTINK LSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN
        YKAIVEAIAQDPSA+GGISNI+ALNLQLENQ  D                          SQSQVIP AFKNFSISLKEKTIAELAQDKWL+C+PDGFVN
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN

Query:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS
        LG                            AELCN+E CTVRVHRYCLKKMLSNKKSKRACPGCGI+WRSTASNIE REEEDEPDT TQDQPSSHKRKKS
Subjt:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS

Query:  RLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR
        RLNIDIDLG NED  AEA QPP SRRATR SAR R
Subjt:  RLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR

XP_038900599.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida]

5.8e-134

77.31

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQALLARGPLREDHFHL+FTRITGKTPDNDQQLFNSYLLTINK LSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN
        YKAIVEAIAQDPSA+GGISNI+ALNLQLENQ  D                          SQSQVIP AFKNFSISLKEKTIAELAQDKWL+C+PDGFVN
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN

Query:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS
        LG                            AELCN+E CTVRVHRYCLKKMLSNKKSKRACPGCGI+WRSTASNIE REEEDEPDT TQDQPSSHKRKKS
Subjt:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS

Query:  RLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR
        RLNIDIDLG NED  AEA QPP SRRATR SAR R
Subjt:  RLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZ19 Non-structural maintenance of chromosomes element 1 homolog

2.1e-129

73.73

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Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FHL+F +ITGKTPDNDQQ+FNSYLLTINK LSFAQFELRGCRNQYDGRVYYGLVN VSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN
        +KAIVEAIAQD SA+GGISNI+ALNLQLENQ  D                          SQSQVIP AFKNFS S KEKTIAELAQDKWL+CTPDGFVN
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN

Query:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS
        LG                            AELC++E CTVRVH+YCLKKMLSNKKSK+ACPGCG RW+ST SNIEP+EEEDEPDTRTQDQPSSHKRKKS
Subjt:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS

Query:  RLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR
        RLN+DIDLGPNEDSTAEASQPP +RR TRSSARQR
Subjt:  RLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR

A0A1S3BMD8 Non-structural maintenance of chromosomes element 1 homolog

1.8e-128

73.81

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Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FHL+F RITGKTPDNDQQ+FNSYLLTINK LSFAQFELRGCRNQYDGRVYYGLVN VSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN
        +KAIVEAIAQDPSA+GGISNI+ALNLQLENQ  D                           QSQVIP AFKNFS S KEKTIAELAQDKWL+CTP+GFVN
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN

Query:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS
        LG                            AELC+SE CTVRVHRYCLKKMLSNKKSKRACPGCG RW+ST SNIE +EE DEPDTRTQDQPSSHKRKKS
Subjt:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS

Query:  RLNIDIDLGPNEDSTAEASQ-PPDSRRATRSSARQR
        +LN+DIDLGPNEDSTAEASQ PPD+RRATR+S RQR
Subjt:  RLNIDIDLGPNEDSTAEASQ-PPDSRRATRSSARQR

A0A6J1GZN9 Non-structural maintenance of chromosomes element 1 homolog

2.5e-122

71.6

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Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLREDHFHL+FTRIT K+P+ND+QLFN+YLLT+NK LSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN
        YKAIVEAIAQDPSA GGISNIAAL+LQLENQ  D                          SQS VIPPAFKNFSISLKEKTIAELAQD+WLNCTPDGFVN
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN

Query:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS
        LG                            AELC++EGCTVRVHRYCLKKMLSNKKSKRACP CG +WRSTA N+E +EEEDEPD R Q Q SSHKRKK+
Subjt:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS

Query:  RLNIDIDLGPNEDS--TAEASQ-PPDSRRATRSSARQR
        RLN DID GPN DS   A+ASQ PPD+RR TRSSA  R
Subjt:  RLNIDIDLGPNEDS--TAEASQ-PPDSRRATRSSARQR

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

1.0e-123

72.19

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Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLREDHFHL+FTRIT K+PDND+QLFN+YLLT+NK LSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN
        YKAIVEAIAQDPSA+GGISNIAAL+LQLENQ  D                          SQS VIPPAFKNFSISLKEKTIAELAQD+WLNCTPDGFVN
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN

Query:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS
        LG                            AELC++EGCTVRVHRYCLKKMLSNKKSKRACP CG +WRSTA N+E +EEEDEPD R Q Q SSHKRKK+
Subjt:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS

Query:  RLNIDIDLGPNEDS--TAEASQ-PPDSRRATRSSARQR
        RLN DID GPN DS   A+ASQ PPD+RR TRSSA QR
Subjt:  RLNIDIDLGPNEDS--TAEASQ-PPDSRRATRSSARQR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

1.0e-123

72.19

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Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLREDHFHL+FTRIT K+PDND+QLFN+YLLT+NK LSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN
        YKAIVEAIAQDPSA+GGISNIAAL+LQLENQ  D                          SQS VIPPAFKNFSISLKEKTIAELAQD+WLNCTPDGFVN
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN

Query:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS
        LG                            AELC++EGCTVRVHRYCLKKMLSNKKSKRACP CG +WRSTA N+E +EEEDEPD R Q Q SSHKRKK+
Subjt:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS

Query:  RLNIDIDLGPNEDS--TAEASQ-PPDSRRATRSSARQR
        RLN DID GPN DS   A+ASQ PPD+RR TRSSA QR
Subjt:  RLNIDIDLGPNEDS--TAEASQ-PPDSRRATRSSARQR

SwissProt top hits

e value

%identity

Alignment

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

5.3e-05

20.74

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Query:  HHTLIQALLARG-----PLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYK
        H   +QAL++ G      +R  H H           D      + ++  +N+ L      +     + DG  YY LVN V ++ +K+ + Y+  ++  ++
Subjt:  HHTLIQALLARG-----PLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYK

Query:  AIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVNLG
          +E I    S  G  ++I+ LNL  E Q+   +        K+++ ++  S+   +W   +          I   E  I    QD    C     V + 
Subjt:  AIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVNLG

Query:  AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS
        ++LC  E C + +H  C  K   + K+   CP C   W     ++     +    ++T+     ++R K+
Subjt:  AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

9.1e-69

43.75

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E  FH +FT +TG+ P   +++F+ YLL INKELS+  FEL+ CR+QYDG+V YG+VN V+D+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN
        +K I+EAIAQD +A+G IS+  ALN++LENQ                   +SS       S  Q +PPAFKNFS++ KEKT+ EL +DKWL  T +  + 
Subjt:  YKAIVEAIAQDPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVN

Query:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRW-RSTASNIEPREEEDEPDTRTQDQPSSHKRKK
        LG                            A+LC +EGC VR+H+YCLKK+LS +  KR C GCG  W  S  +  E  EE    +  ++ Q ++ K K+
Subjt:  LG----------------------------AELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRW-RSTASNIEPREEEDEPDTRTQDQPSSHKRKK

Query:  SRLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR
         R   D     +  ++  ++   ++RR TRS    R
Subjt:  SRLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCAGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTACTTGCTCGCGGCCCACTCAGAGAGGATCACTTCCATCTGGTGTTTACACGGATCACTGGAAAGAC
TCCAGATAATGACCAGCAACTTTTTAATAGTTACCTCCTGACAATAAATAAAGAACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGTCGTG
TTTACTACGGCTTGGTCAATACTGTATCTGACGAGCAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCGATTGCACAA
GATCCATCTGCTGAAGGTGGAATATCCAACATTGCTGCTCTAAATCTGCAGTTGGAAAATCAGGCTTTTGATTGTCAAATGACAATATTGTGGGTAAAGTTGAAAAGAGA
CCTGACAAAAGTTTCCAGCTCCTGGTATTTGTATCAATGGTCCCAGTCCCAAGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCG
AGCTTGCTCAGGATAAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGGGCAGAGTTATGTAATAGTGAAGGTTGCACTGTCCGTGTACATCGGTATTGCCTT
AAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCCTGCCCAGGTTGTGGCATTCGATGGCGATCTACAGCATCCAATATAGAGCCCAGGGAGGAAGAGGATGAGCCAGA
TACGCGCACTCAAGACCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACATAGATATTGATTTAGGACCAAACGAAGACAGTACAGCAGAAGCTTCCCAACCTC
CAGATTCAAGGAGAGCAACGCGAAGTTCTGCACGCCAGCGGTAG

mRNA sequence

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GCACTATCCTCCTCGTTTGAGATTAGAGAGGAGGGGGCGATATTTCCCGCGTTTTGAAAGCGGACATCCTTCGCGAAACTTCACCGCCGGCCGCCGGGGTTCAGAATGCC
AGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTACTTGCTCGCGGCCCACTCAGAGAGGATCACTTCCATCTGGTGTTTACACGGATCACTGGAAAGACTCCAG
ATAATGACCAGCAACTTTTTAATAGTTACCTCCTGACAATAAATAAAGAACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGTCGTGTTTAC
TACGGCTTGGTCAATACTGTATCTGACGAGCAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCGATTGCACAAGATCC
ATCTGCTGAAGGTGGAATATCCAACATTGCTGCTCTAAATCTGCAGTTGGAAAATCAGGCTTTTGATTGTCAAATGACAATATTGTGGGTAAAGTTGAAAAGAGACCTGA
CAAAAGTTTCCAGCTCCTGGTATTTGTATCAATGGTCCCAGTCCCAAGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCGAGCTT
GCTCAGGATAAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGGGCAGAGTTATGTAATAGTGAAGGTTGCACTGTCCGTGTACATCGGTATTGCCTTAAGAA
AATGTTATCCAATAAAAAGAGTAAAAGGGCCTGCCCAGGTTGTGGCATTCGATGGCGATCTACAGCATCCAATATAGAGCCCAGGGAGGAAGAGGATGAGCCAGATACGC
GCACTCAAGACCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACATAGATATTGATTTAGGACCAAACGAAGACAGTACAGCAGAAGCTTCCCAACCTCCAGAT
TCAAGGAGAGCAACGCGAAGTTCTGCACGCCAGCGGTAGGTCCTGGAATAAGGTACTGTTATTTTAATATGGTTTCATGGATCCTATTATTAGTTTAGGAGTTGTAAAGT
GTGCAGCAACTGCACTTTTTGATGTCATGTGTCAAAATTGTGACCCTATTTAGATTTAGTTGAAGGGTCATTTTGAAGTATTTATACCCAGGACCGGAATATAAGGCAGA
AGTAAAAGTTTTTTTTAGCTCTCGTATACTGTAGGTGTGGTTCTCCTTTCTTGTCCTCTGTAAATGCAAGAAACCGCTGTTTCATTGTAGTATTCAATTCTTTTGTGCCT
AAGATAGTTTGATTGTTTTGAGCAGAATTACTATCGGATTGTTACTTCAAAGAATAGAGTATAAATAGGTATCATCCCGAACAGCCCAAACTGTAGCCTCTTTAAATTCA
AGGATAATTGTAATGGATAATACTTTTAGGGATAATAACCAAGTGTATAGCAACATTTTAAAATAATTACAAATA

Protein sequence

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MPELSWRHHTLIQALLARGPLREDHFHLVFTRITGKTPDNDQQLFNSYLLTINKELSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQ
DPSAEGGISNIAALNLQLENQAFDCQMTILWVKLKRDLTKVSSSWYLYQWSQSQVIPPAFKNFSISLKEKTIAELAQDKWLNCTPDGFVNLGAELCNSEGCTVRVHRYCL
KKMLSNKKSKRACPGCGIRWRSTASNIEPREEEDEPDTRTQDQPSSHKRKKSRLNIDIDLGPNEDSTAEASQPPDSRRATRSSARQR

Lsi10G009400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome