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Lsi10G009580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G009580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHomeobox protein cut-like 1
Genome locationchr10:13943459..13946476
RNA-Seq ExpressionLsi10G009580
SyntenyLsi10G009580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN35832.1 unknown [Zea mays]5.0e-0736.8Show/hide
Query:  AKSCRKMVRDVPTGGVSADENSAEIGHVGQPGIGV-------PPESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNV
        A+  R +V DV    V+  E++ E+G VG+PG+         P     AV+ GGR+ +LG + VV G+    +LG +A+A  + +GP  G DAEAAAV V
Subjt:  AKSCRKMVRDVPTGGVSADENSAEIGHVGQPGIGV-------PPESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNV

Query:  EKEGK---LGRRNGSRLVETEVKMV
           G    +GR    R V+  V+ V
Subjt:  EKEGK---LGRRNGSRLVETEVKMV

CAB3455749.1 unnamed protein product [Digitaria exilis]1.6e-0540.43Show/hide
Query:  ARSFNRSAPPTTTIIGSISTASKFRLLGPNTFTRGWSVLLPIGIDNLQNLLNGQNQTLDSLKSKLKLQFKKASLGPSASERVLTVPPKNGARRT
        A + + S PP TT  G  S A++  L GPN F  GWS++ P G D+LQNL               + +F  AS G SAS+ V   PPKNG  +T
Subjt:  ARSFNRSAPPTTTIIGSISTASKFRLLGPNTFTRGWSVLLPIGIDNLQNLLNGQNQTLDSLKSKLKLQFKKASLGPSASERVLTVPPKNGARRT

OAY73279.1 hypothetical protein ACMD2_02830 [Ananas comosus]2.5e-1432.49Show/hide
Query:  SRIANEKLNEKRENQNYNSLPVVEFWRSPLGTCDSSVPEPVSSAPDPSFLIDAKSSSAVLDSVNNFSAYSTARSFNRSAPPTTTIIGSISTASKFRLLGP
        +++      E   N + N L +     SP G+    V +   S P  S      +SS    S   F+AYS  RS  R+ P        +S      L GP
Subjt:  SRIANEKLNEKRENQNYNSLPVVEFWRSPLGTCDSSVPEPVSSAPDPSFLIDAKSSSAVLDSVNNFSAYSTARSFNRSAPPTTTIIGSISTASKFRLLGP

Query:  NTFTRGWSV-LLPIGIDNLQNLLNGQNQTLDSLKSKLKLQFKKASLGPSASERVLTVPPKNGARRTRTQAKSCRKMVRDVPTGGVSADENSAEIGHVGQP
        N    GWS+  +P+G   +Q  +               LQF+    GP          P +  R    + +    +V DV  G V+ DE+ AE+G   QP
Subjt:  NTFTRGWSV-LLPIGIDNLQNLLNGQNQTLDSLKSKLKLQFKKASLGPSASERVLTVPPKNGARRTRTQAKSCRKMVRDVPTGGVSADENSAEIGHVGQP

Query:  GIG---------VPPESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKL
        G+G          P E   AV+DGG +A+LG E VV GDDE  +LGGEA+A  + +GP   ADAEAAAV V++ G+L
Subjt:  GIG---------VPPESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKL

RXH83291.1 hypothetical protein DVH24_005544 [Malus domestica]1.9e-2242.65Show/hide
Query:  KNGARR----TRTQAKSCRKMVRDVPTGGVSADENSAEIG----HVGQPGIGVPP-ESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPS
        KNG +     TRT  +  R+++ ++PT  V+ +++   I      +   G+G+ P  SREA++DG R+A+   E +VR +D++ +LGGE KAVVLA+ P 
Subjt:  KNGARR----TRTQAKSCRKMVRDVPTGGVSADENSAEIG----HVGQPGIGVPP-ESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPS

Query:  AGADAEAAAVNVEKEGKL-GRRNG-----SRLVETEVKMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGSGGHGFKSTQKRR
        A ADAEA AV+VE++ +L G+R G     S LVE E++++  V+      NG+VV D DVEAW G AD GA+AV+AE+  A   F G G +G KS +KR 
Subjt:  AGADAEAAAVNVEKEGKL-GRRNG-----SRLVETEVKMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGSGGHGFKSTQKRR

Query:  EEMR
        +E R
Subjt:  EEMR

TQE05635.1 hypothetical protein C1H46_008768 [Malus baccata]6.3e-1842.01Show/hide
Query:  DVPTGGVSADENSAEIGHVGQP-------GIGVPP-ESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKL-G
        ++PT  V+ +++   + H+  P       G+G+ P  SREA++DG  +A+   E +VR +D++ + GGE KAVVLA+ P   ADAEA  V VE++G+L G
Subjt:  DVPTGGVSADENSAEIGHVGQP-------GIGVPP-ESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKL-G

Query:  RRNG-----SRLVETEVKMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGSG
        +R G     S LVE E++++  V+      NG+VV DRDVEAW G A+ GA AV+AE+  A   F G G
Subjt:  RRNG-----SRLVETEVKMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGSG

TrEMBL top hitse value%identityAlignment
A0A199V875 Uncharacterized protein1.2e-1432.49Show/hide
Query:  SRIANEKLNEKRENQNYNSLPVVEFWRSPLGTCDSSVPEPVSSAPDPSFLIDAKSSSAVLDSVNNFSAYSTARSFNRSAPPTTTIIGSISTASKFRLLGP
        +++      E   N + N L +     SP G+    V +   S P  S      +SS    S   F+AYS  RS  R+ P        +S      L GP
Subjt:  SRIANEKLNEKRENQNYNSLPVVEFWRSPLGTCDSSVPEPVSSAPDPSFLIDAKSSSAVLDSVNNFSAYSTARSFNRSAPPTTTIIGSISTASKFRLLGP

Query:  NTFTRGWSV-LLPIGIDNLQNLLNGQNQTLDSLKSKLKLQFKKASLGPSASERVLTVPPKNGARRTRTQAKSCRKMVRDVPTGGVSADENSAEIGHVGQP
        N    GWS+  +P+G   +Q  +               LQF+    GP          P +  R    + +    +V DV  G V+ DE+ AE+G   QP
Subjt:  NTFTRGWSV-LLPIGIDNLQNLLNGQNQTLDSLKSKLKLQFKKASLGPSASERVLTVPPKNGARRTRTQAKSCRKMVRDVPTGGVSADENSAEIGHVGQP

Query:  GIG---------VPPESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKL
        G+G          P E   AV+DGG +A+LG E VV GDDE  +LGGEA+A  + +GP   ADAEAAAV V++ G+L
Subjt:  GIG---------VPPESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKL

A0A498IP91 Uncharacterized protein9.2e-2342.65Show/hide
Query:  KNGARR----TRTQAKSCRKMVRDVPTGGVSADENSAEIG----HVGQPGIGVPP-ESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPS
        KNG +     TRT  +  R+++ ++PT  V+ +++   I      +   G+G+ P  SREA++DG R+A+   E +VR +D++ +LGGE KAVVLA+ P 
Subjt:  KNGARR----TRTQAKSCRKMVRDVPTGGVSADENSAEIG----HVGQPGIGVPP-ESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPS

Query:  AGADAEAAAVNVEKEGKL-GRRNG-----SRLVETEVKMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGSGGHGFKSTQKRR
        A ADAEA AV+VE++ +L G+R G     S LVE E++++  V+      NG+VV D DVEAW G AD GA+AV+AE+  A   F G G +G KS +KR 
Subjt:  AGADAEAAAVNVEKEGKL-GRRNG-----SRLVETEVKMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGSGGHGFKSTQKRR

Query:  EEMR
        +E R
Subjt:  EEMR

A0A540N3L9 Uncharacterized protein3.1e-1842.01Show/hide
Query:  DVPTGGVSADENSAEIGHVGQP-------GIGVPP-ESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKL-G
        ++PT  V+ +++   + H+  P       G+G+ P  SREA++DG  +A+   E +VR +D++ + GGE KAVVLA+ P   ADAEA  V VE++G+L G
Subjt:  DVPTGGVSADENSAEIGHVGQP-------GIGVPP-ESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKL-G

Query:  RRNG-----SRLVETEVKMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGSG
        +R G     S LVE E++++  V+      NG+VV DRDVEAW G A+ GA AV+AE+  A   F G G
Subjt:  RRNG-----SRLVETEVKMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGSG

A0A7N0VG02 Uncharacterized protein2.8e-1942.94Show/hide
Query:  DVPTGGVSADENSAEIGHVGQPGIGV--------PPESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKLGR
        +VPT GV+ DE+ ++I H  QP +          P    E ++D   +A+L  + VV  +D   ++  +A+AVVLA+GPS GADAEAAAV+V ++G+ GR
Subjt:  DVPTGGVSADENSAEIGHVGQPGIGV--------PPESREAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKLGR

Query:  RNG-SRLVETEVKMVDGVKE----KNGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDF---KGSGGHG
          G   LVE E+++V GV++    +NG+V+ DRD EA +GGAD GAIAV++E+  A I F    G+ G+G
Subjt:  RNG-SRLVETEVKMVDGVKE----KNGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDF---KGSGGHG

K3ZVA7 Uncharacterized protein5.8e-0935.54Show/hide
Query:  LKLQFKKASLGPSASERVLTVPPKNGARRTRTQAKSCRKMVRDVPTGGVSADENSAEIGHVGQPGIG-----VPPESREAVIDGGRKAILGSETVVRGDD
        L+L  +    G    E  +   P  GA      A+    +V DV  G V++DE++ E+G VG+PG+G      P     AV+ GG  A+L  E VV G+ 
Subjt:  LKLQFKKASLGPSASERVLTVPPKNGARRTRTQAKSCRKMVRDVPTGGVSADENSAEIGHVGQPGIG-----VPPESREAVIDGGRKAILGSETVVRGDD

Query:  ESRKLGGEAKAVVLAIGPSAGADAEAAAVNV--EKEGKLGRRNGSRLVETEVKMVDGVKEKNGSVV
           +LGGEA+A  +  GP+AGADAEAAAV V   ++ ++  R   R VE +V+ V  +   + +V+
Subjt:  ESRKLGGEAKAVVLAIGPSAGADAEAAAVNV--EKEGKLGRRNGSRLVETEVKMVDGVKEKNGSVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCAATTGACGTCCCAAGATCCACATCGAAATCTAGAATTGCGAACGAAAAATTAAATGAAAAGCGAGAAAATCAAAATTATAATTCCTTACCTGTTGTTGAATT
TTGGCGAAGTCCGCTGGGGACATGCGACTCATCTGTTCCTGAGCCAGTCTCATCAGCTCCGGATCCATCATTCCTGATCGATGCAAAATCTTCCTCTGCCGTACTCGATT
CAGTAAACAACTTCTCTGCATACTCCACCGCTCGATCTTTCAACAGATCAGCGCCGCCCACCACCACCATTATCGGATCCATTTCCACCGCCTCCAAGTTCCGGCTTCTC
GGTCCGAACACGTTCACAAGAGGATGGTCGGTGCTGCTTCCGATCGGGATCGACAATCTCCAAAACCTGCTCAATGGTCAAAACCAAACCCTAGATTCATTGAAATCGAA
ACTCAAATTGCAATTCAAGAAGGCTTCTTTGGGACCTTCTGCCTCGGAACGAGTCCTCACCGTCCCGCCGAAGAACGGCGCCAGGAGAACGCGAACCCAGGCCAAGTCCT
GCCGCAAGATGGTGCGCGATGTTCCCACCGGCGGAGTCTCCGCTGATGAAAACTCTGCTGAAATCGGCCACGTCGGCCAGCCAGGGATCGGGGTGCCACCGGAGAGCCGC
GAAGCCGTCATCGATGGCGGCCGGAAGGCGATTCTCGGGAGCGAGACGGTAGTCCGGGGAGATGACGAGAGCAGGAAGCTCGGCGGCGAGGCGAAAGCAGTAGTTCTGGC
AATTGGGCCAAGTGCGGGAGCCGATGCAGAAGCCGCCGCCGTGAATGTAGAAAAAGAGGGGAAGCTTGGAAGAAGAAATGGCAGCAGGCTTGTAGAGACGGAGGTGAAGA
TGGTGGATGGGGTCAAAGAGAAGAACGGATCCGTCGTCGAGGACAGGGACGTTGAAGCTTGGATTGGAGGAGCGGACTATGGAGCCATCGCTGTAAACGCGGAGGACACC
ACGGCACTCATCGACTTCAAAGGGAGTGGTGGCCATGGCTTCAAGTCAACACAGAAGAGAAGAGAAGAGATGAGAACGAAAGGTGGAAAAAGGGAAGAATTAAAGGAGAG
ATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCAATTGACGTCCCAAGATCCACATCGAAATCTAGAATTGCGAACGAAAAATTAAATGAAAAGCGAGAAAATCAAAATTATAATTCCTTACCTGTTGTTGAATT
TTGGCGAAGTCCGCTGGGGACATGCGACTCATCTGTTCCTGAGCCAGTCTCATCAGCTCCGGATCCATCATTCCTGATCGATGCAAAATCTTCCTCTGCCGTACTCGATT
CAGTAAACAACTTCTCTGCATACTCCACCGCTCGATCTTTCAACAGATCAGCGCCGCCCACCACCACCATTATCGGATCCATTTCCACCGCCTCCAAGTTCCGGCTTCTC
GGTCCGAACACGTTCACAAGAGGATGGTCGGTGCTGCTTCCGATCGGGATCGACAATCTCCAAAACCTGCTCAATGGTCAAAACCAAACCCTAGATTCATTGAAATCGAA
ACTCAAATTGCAATTCAAGAAGGCTTCTTTGGGACCTTCTGCCTCGGAACGAGTCCTCACCGTCCCGCCGAAGAACGGCGCCAGGAGAACGCGAACCCAGGCCAAGTCCT
GCCGCAAGATGGTGCGCGATGTTCCCACCGGCGGAGTCTCCGCTGATGAAAACTCTGCTGAAATCGGCCACGTCGGCCAGCCAGGGATCGGGGTGCCACCGGAGAGCCGC
GAAGCCGTCATCGATGGCGGCCGGAAGGCGATTCTCGGGAGCGAGACGGTAGTCCGGGGAGATGACGAGAGCAGGAAGCTCGGCGGCGAGGCGAAAGCAGTAGTTCTGGC
AATTGGGCCAAGTGCGGGAGCCGATGCAGAAGCCGCCGCCGTGAATGTAGAAAAAGAGGGGAAGCTTGGAAGAAGAAATGGCAGCAGGCTTGTAGAGACGGAGGTGAAGA
TGGTGGATGGGGTCAAAGAGAAGAACGGATCCGTCGTCGAGGACAGGGACGTTGAAGCTTGGATTGGAGGAGCGGACTATGGAGCCATCGCTGTAAACGCGGAGGACACC
ACGGCACTCATCGACTTCAAAGGGAGTGGTGGCCATGGCTTCAAGTCAACACAGAAGAGAAGAGAAGAGATGAGAACGAAAGGTGGAAAAAGGGAAGAATTAAAGGAGAG
ATAA
Protein sequenceShow/hide protein sequence
MKAIDVPRSTSKSRIANEKLNEKRENQNYNSLPVVEFWRSPLGTCDSSVPEPVSSAPDPSFLIDAKSSSAVLDSVNNFSAYSTARSFNRSAPPTTTIIGSISTASKFRLL
GPNTFTRGWSVLLPIGIDNLQNLLNGQNQTLDSLKSKLKLQFKKASLGPSASERVLTVPPKNGARRTRTQAKSCRKMVRDVPTGGVSADENSAEIGHVGQPGIGVPPESR
EAVIDGGRKAILGSETVVRGDDESRKLGGEAKAVVLAIGPSAGADAEAAAVNVEKEGKLGRRNGSRLVETEVKMVDGVKEKNGSVVEDRDVEAWIGGADYGAIAVNAEDT
TALIDFKGSGGHGFKSTQKRREEMRTKGGKREELKER