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Lsi10G009790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G009790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontransmembrane protein 45A
Genome locationchr10:14146389..14147386
RNA-Seq ExpressionLsi10G009790
SyntenyLsi10G009790
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006904 - Protein of unknown function DUF716


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040055.1 transmembrane protein 45A [Cucumis melo var. makuwa]1.2e-3672.73Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAAS-TKMTPYDIASKSFIQMG
        GCFMHLEDGHKVVRCAGD PLHRAKSLIN+QFSWLLI+LTI  LSF+L+L KLYQQ     NP  YFSL+TND+EE    ++ TK T YD+ SKSFIQMG
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAAS-TKMTPYDIASKSFIQMG

Query:  HKFTETDMER
        HK T+TDMER
Subjt:  HKFTETDMER

KAG7010234.1 hypothetical protein SDJN02_27026, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-3169.72Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAASTKMTPYDIASKSFIQMGH
        GCFMHLEDGHKVVRC G+APLHRAKSLIN+QFSWLLI+LTIFALSFHL L KLYQQTP  KNP  Y SL+TN+EEE+           D  ++SFI+MGH
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAASTKMTPYDIASKSFIQMGH

Query:  KFTETDMER
        KFTE  M R
Subjt:  KFTETDMER

XP_004142158.1 transmembrane protein 45A [Cucumis sativus]9.3e-3468.64Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQ---TPTNKNPAHYFSLMTNDEEEKE-EAAS---TKMTPYDIAS-
        GCFMHLEDGHKVVRCAGD PLHRAKSLIN+QFSWLLI+LTI +LSF+L+L KLYQQ    P   NP  YFSL+TND+EE++ EAA+   TK + Y++ S 
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQ---TPTNKNPAHYFSLMTNDEEEKE-EAAS---TKMTPYDIAS-

Query:  -KSFIQMGHKFTETDMER
         KSFIQMGHK  +TDMER
Subjt:  -KSFIQMGHKFTETDMER

XP_008449792.1 PREDICTED: transmembrane protein 45A [Cucumis melo]1.2e-3672.73Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAAS-TKMTPYDIASKSFIQMG
        GCFMHLEDGHKVVRCAGD PLHRAKSLIN+QFSWLLI+LTI  LSF+L+L KLYQQ     NP  YFSL+TND+EE    ++ TK T YD+ SKSFIQMG
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAAS-TKMTPYDIASKSFIQMG

Query:  HKFTETDMER
        HK T+TDMER
Subjt:  HKFTETDMER

XP_038901896.1 transmembrane protein 45B-like [Benincasa hispida]5.5e-4283.64Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEK-EEAASTKMTPYDIASKSFIQMG
        GCFMHLEDGHKVVRCAG+ PL RAK+LINLQFSWLLI+LTIFALSFHLLL KLYQQ  T KN AHYFSLMT+DEE+  E AASTK+TPYD+AS+SFIQMG
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEK-EEAASTKMTPYDIASKSFIQMG

Query:  HKFTETDMER
        HKFTETDMER
Subjt:  HKFTETDMER

TrEMBL top hitse value%identityAlignment
A0A0A0KX38 Uncharacterized protein4.5e-3468.64Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQ---TPTNKNPAHYFSLMTNDEEEKE-EAAS---TKMTPYDIAS-
        GCFMHLEDGHKVVRCAGD PLHRAKSLIN+QFSWLLI+LTI +LSF+L+L KLYQQ    P   NP  YFSL+TND+EE++ EAA+   TK + Y++ S 
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQ---TPTNKNPAHYFSLMTNDEEEKE-EAAS---TKMTPYDIAS-

Query:  -KSFIQMGHKFTETDMER
         KSFIQMGHK  +TDMER
Subjt:  -KSFIQMGHKFTETDMER

A0A1S3BMV5 transmembrane protein 45A5.7e-3772.73Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAAS-TKMTPYDIASKSFIQMG
        GCFMHLEDGHKVVRCAGD PLHRAKSLIN+QFSWLLI+LTI  LSF+L+L KLYQQ     NP  YFSL+TND+EE    ++ TK T YD+ SKSFIQMG
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAAS-TKMTPYDIASKSFIQMG

Query:  HKFTETDMER
        HK T+TDMER
Subjt:  HKFTETDMER

A0A5D3DDV8 Transmembrane protein 45A5.7e-3772.73Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAAS-TKMTPYDIASKSFIQMG
        GCFMHLEDGHKVVRCAGD PLHRAKSLIN+QFSWLLI+LTI  LSF+L+L KLYQQ     NP  YFSL+TND+EE    ++ TK T YD+ SKSFIQMG
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAAS-TKMTPYDIASKSFIQMG

Query:  HKFTETDMER
        HK T+TDMER
Subjt:  HKFTETDMER

A0A6J1FXU7 transmembrane protein 45A-like9.8e-2968.27Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAASTKMTPYDIASKSFIQMGH
        GCFMHLEDGHKVVRC G+AP HRAKSLIN+QFSWLL +LTIFALSFHL L KLYQQTP  KNP  Y SL+TN+EEE+           D  ++SFI+MGH
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAASTKMTPYDIASKSFIQMGH

Query:  KFTE
        KF E
Subjt:  KFTE

A0A6J1JGR5 transmembrane protein 45A-like isoform X15.7e-2966.06Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAASTKMTPYDIASKSFIQMGH
        GCFMHLEDGHKVVRC G+APLHRAKSL+N+QFSWLLI+LTIFALS HL L KLYQQTP  KNP  Y SL+T++ EE+           D  ++SFI+MGH
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAASTKMTPYDIASKSFIQMGH

Query:  KFTETDMER
        KFTE  M R
Subjt:  KFTETDMER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55230.1 Family of unknown function (DUF716)7.9e-1542.7Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDE-----EEKEEAASTK
        GCF+H E+GH+V++C+ D  +HRAKSL+N++FSW  + +TIF +S  L+L  LY +       A Y  L+T D+     EEK++  S K
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDE-----EEKEEAASTK

AT1G55240.1 Family of unknown function (DUF716)6.7e-1440Show/hide
Query:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTN------DEEEKEEAASTKMTPYDIASKS
        GC++H E  H +V+C+ +  LHRAKSL+NL+FSWL ++ T+F ++ +L+L ++Y +         Y SL TN      DEE+  E+ ST+ T       S
Subjt:  GCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTN------DEEEKEEAASTKMTPYDIASKS

Query:  FIQMG
        F+QMG
Subjt:  FIQMG

AT5G19870.1 Family of unknown function (DUF716)6.9e-1149.06Show/hide
Query:  CFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLY
        CF+H+E+G   +RC+    LHRA SL+N+QFSW L+ +TIFA+ F++ L ++Y
Subjt:  CFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGCTTTATGCACTTGGAAGATGGGCACAAGGTGGTCCGATGCGCCGGGGACGCGCCACTTCATCGAGCAAAGTCGCTGATCAACCTTCAGTTCAGCTGGCTATT
AATTTCACTCACCATTTTCGCTTTATCATTTCATTTGCTTCTGTTTAAATTATACCAACAAACTCCCACGAACAAGAACCCCGCCCACTACTTTTCATTAATGACCAACG
ACGAAGAAGAAAAAGAAGAAGCAGCCTCAACAAAAATGACACCGTACGACATCGCTTCGAAGAGCTTTATTCAAATGGGCCACAAGTTCACGGAAACCGACATGGAAAGG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGCTTTATGCACTTGGAAGATGGGCACAAGGTGGTCCGATGCGCCGGGGACGCGCCACTTCATCGAGCAAAGTCGCTGATCAACCTTCAGTTCAGCTGGCTATT
AATTTCACTCACCATTTTCGCTTTATCATTTCATTTGCTTCTGTTTAAATTATACCAACAAACTCCCACGAACAAGAACCCCGCCCACTACTTTTCATTAATGACCAACG
ACGAAGAAGAAAAAGAAGAAGCAGCCTCAACAAAAATGACACCGTACGACATCGCTTCGAAGAGCTTTATTCAAATGGGCCACAAGTTCACGGAAACCGACATGGAAAGG
TAG
Protein sequenceShow/hide protein sequence
MGCFMHLEDGHKVVRCAGDAPLHRAKSLINLQFSWLLISLTIFALSFHLLLFKLYQQTPTNKNPAHYFSLMTNDEEEKEEAASTKMTPYDIASKSFIQMGHKFTETDMER