; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G009880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G009880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Genome locationchr10:14231786..14235252
RNA-Seq ExpressionLsi10G009880
SyntenyLsi10G009880
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0048564 - photosystem I assembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0047134 - protein-disulfide reductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040049.1 protein EMBRYO SAC DEVELOPMENT ARREST 3 [Cucumis melo var. makuwa]6.2e-7984.75Show/hide
Query:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL
        MEANSKPVVLH+TSNSDDES STGDS TPSKPLKGTQNLISRRWCLTCLCSSVTL+KNYGGT TEAIANTMDGKPVCRNCGGSGA               
Subjt:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL

Query:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
           VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNG  LP
Subjt:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

XP_016900745.1 PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X1 [Cucumis melo]2.0e-7784Show/hide
Query:  ANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLF
        +NSKPVVLH+TSNSDDES STGDS TPSKPLKGTQNLISRRWCLTCLCSSVTL+KNYGGT TEAIANTMDGKPVCRNCGGSGA                 
Subjt:  ANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLF

Query:  FVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
         VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNG  LP
Subjt:  FVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

XP_016900746.1 PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X2 [Cucumis melo]2.0e-7783.05Show/hide
Query:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL
        +  NSKPVVLH+TSNSDDES STGDS TPSKPLKGTQNLISRRWCLTCLCSSVTL+KNYGGT TEAIANTMDGKPVCRNCGGSGA               
Subjt:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL

Query:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
           VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNG  LP
Subjt:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

XP_016900747.1 PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X3 [Cucumis melo]1.4e-7884.18Show/hide
Query:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL
        +EANSKPVVLH+TSNSDDES STGDS TPSKPLKGTQNLISRRWCLTCLCSSVTL+KNYGGT TEAIANTMDGKPVCRNCGGSGA               
Subjt:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL

Query:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
           VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNG  LP
Subjt:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

XP_038901741.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Benincasa hispida]8.9e-7884.48Show/hide
Query:  NSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLFF
        NSKPVVLHVTS SD ES STG SN PSKPLKGTQNLISRRWCLTCLCSSVTL+KNYGGTGTEAIANTMDGKPVCRNCGGSGA                  
Subjt:  NSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLFF

Query:  VLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
        VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNG  LP
Subjt:  VLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

TrEMBL top hitse value%identityAlignment
A0A0A0KX46 Uncharacterized protein4.8e-7782.86Show/hide
Query:  ANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLF
        AN KPVVLHVTSNSDDES STGDS TPSKPLKGTQ LISRRWCLTCLCSSVTL+K+YGGT TEAIANTMDGKP CRNCGGSGA                 
Subjt:  ANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLF

Query:  FVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
         VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNG  LP
Subjt:  FVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

A0A1S4DXN8 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X29.6e-7883.05Show/hide
Query:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL
        +  NSKPVVLH+TSNSDDES STGDS TPSKPLKGTQNLISRRWCLTCLCSSVTL+KNYGGT TEAIANTMDGKPVCRNCGGSGA               
Subjt:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL

Query:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
           VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNG  LP
Subjt:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

A0A1S4DXP4 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X36.7e-7984.18Show/hide
Query:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL
        +EANSKPVVLH+TSNSDDES STGDS TPSKPLKGTQNLISRRWCLTCLCSSVTL+KNYGGT TEAIANTMDGKPVCRNCGGSGA               
Subjt:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL

Query:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
           VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNG  LP
Subjt:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

A0A1S4DYE8 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X19.6e-7884Show/hide
Query:  ANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLF
        +NSKPVVLH+TSNSDDES STGDS TPSKPLKGTQNLISRRWCLTCLCSSVTL+KNYGGT TEAIANTMDGKPVCRNCGGSGA                 
Subjt:  ANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLF

Query:  FVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
         VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNG  LP
Subjt:  FVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

A0A5A7TFL6 Protein EMBRYO SAC DEVELOPMENT ARREST 33.0e-7984.75Show/hide
Query:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL
        MEANSKPVVLH+TSNSDDES STGDS TPSKPLKGTQNLISRRWCLTCLCSSVTL+KNYGGT TEAIANTMDGKPVCRNCGGSGA               
Subjt:  MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCL

Query:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
           VL DMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNG  LP
Subjt:  LFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

SwissProt top hitse value%identityAlignment
A0A1D6KL43 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic8.7e-4465Show/hide
Query:  SRRWCLTCLCSSVTLIKNYG---GTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYG
        SRR CL CL  +VTLI   G   G   +A+      K VCRNC GSGA                  V+ DMCGGTGKWKALNRKRAKDVYEFTECPNCYG
Subjt:  SRRWCLTCLCSSVTLIKNYG---GTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGGTGKWKALNRKRAKDVYEFTECPNCYG

Query:  RGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
        RGKLVCPVCLGTGLPNNKGLLRRP+A++LLDKMYNG  LP
Subjt:  RGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

O64750 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic1.3e-4457.23Show/hide
Query:  NSDDESRSTGDSNTPSKPLKGTQNLISRR-WCLTCLCSSVTLIKNYGGTGTEAIANTMDGKP--VCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGG
        N   +S  +  S+  +   +G Q  +SRR W   C+C+S  LI N     +   A  +D KP   CRNC GSGA                  VL DMCGG
Subjt:  NSDDESRSTGDSNTPSKPLKGTQNLISRR-WCLTCLCSSVTLIKNYGGTGTEAIANTMDGKP--VCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGG

Query:  TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
        TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRP AR+LL+KMYNG  LP
Subjt:  TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

Q6YUA8 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic6.1e-4562.05Show/hide
Query:  NSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGT--GTEAIANTMDGKP-VCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGG
        + D E+ ST    T  K  + T    SRR CL CLC +VTLI   G T      +A+ M  KP VCRNC GSGA                  VL DMCGG
Subjt:  NSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGT--GTEAIANTMDGKP-VCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGG

Query:  TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
        TGKWKALNRKRAKDVY FTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDA+KLLDKMYNG  LP
Subjt:  TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

Arabidopsis top hitse value%identityAlignment
AT2G34860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein9.6e-4657.23Show/hide
Query:  NSDDESRSTGDSNTPSKPLKGTQNLISRR-WCLTCLCSSVTLIKNYGGTGTEAIANTMDGKP--VCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGG
        N   +S  +  S+  +   +G Q  +SRR W   C+C+S  LI N     +   A  +D KP   CRNC GSGA                  VL DMCGG
Subjt:  NSDDESRSTGDSNTPSKPLKGTQNLISRR-WCLTCLCSSVTLIKNYGGTGTEAIANTMDGKP--VCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGG

Query:  TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
        TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRP AR+LL+KMYNG  LP
Subjt:  TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP

AT2G34860.2 DnaJ/Hsp40 cysteine-rich domain superfamily protein9.6e-4657.23Show/hide
Query:  NSDDESRSTGDSNTPSKPLKGTQNLISRR-WCLTCLCSSVTLIKNYGGTGTEAIANTMDGKP--VCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGG
        N   +S  +  S+  +   +G Q  +SRR W   C+C+S  LI N     +   A  +D KP   CRNC GSGA                  VL DMCGG
Subjt:  NSDDESRSTGDSNTPSKPLKGTQNLISRR-WCLTCLCSSVTLIKNYGGTGTEAIANTMDGKP--VCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCGG

Query:  TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP
        TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRP AR+LL+KMYNG  LP
Subjt:  TGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTAACTCAAAGCCTGTTGTACTTCATGTGACATCAAATTCTGACGATGAAAGCCGCAGTACTGGAGATTCAAATACTCCATCAAAACCGCTGAAGGGAACTCA
AAACTTGATTTCTCGTCGATGGTGCCTCACATGTTTATGTTCATCTGTGACATTGATAAAGAATTATGGGGGCACAGGGACTGAAGCTATTGCAAATACCATGGATGGAA
AACCTGTGTGCCGAAATTGTGGAGGAAGTGGTGCCATTAGTTTTATCTATTTGTGCTCCCTATTTCCCATGGGATGCTTACTGTTCTTCGTTTTAGGTGACATGTGCGGT
GGTACAGGGAAATGGAAAGCTCTGAACAGAAAACGGGCTAAAGATGTCTATGAGTTTACAGAATGTCCAAATTGTTACGGTAGAGGAAAACTTGTATGTCCTGTTTGTCT
AGGAACCGGTTTACCAAACAACAAAGGTCTCCTAAGAAGGCCCGACGCGCGGAAATTGCTTGATAAGATGTACAATGGTGTTGCACTGCCTCCCGTAATAAATATTGAAG
CTAAAGCCTTCCTTGAAAATGAAGCTGTGGATTTAAAGATATCATTCTCTGATGAAGCAACTTACTTCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTAACTCAAAGCCTGTTGTACTTCATGTGACATCAAATTCTGACGATGAAAGCCGCAGTACTGGAGATTCAAATACTCCATCAAAACCGCTGAAGGGAACTCA
AAACTTGATTTCTCGTCGATGGTGCCTCACATGTTTATGTTCATCTGTGACATTGATAAAGAATTATGGGGGCACAGGGACTGAAGCTATTGCAAATACCATGGATGGAA
AACCTGTGTGCCGAAATTGTGGAGGAAGTGGTGCCATTAGTTTTATCTATTTGTGCTCCCTATTTCCCATGGGATGCTTACTGTTCTTCGTTTTAGGTGACATGTGCGGT
GGTACAGGGAAATGGAAAGCTCTGAACAGAAAACGGGCTAAAGATGTCTATGAGTTTACAGAATGTCCAAATTGTTACGGTAGAGGAAAACTTGTATGTCCTGTTTGTCT
AGGAACCGGTTTACCAAACAACAAAGGTCTCCTAAGAAGGCCCGACGCGCGGAAATTGCTTGATAAGATGTACAATGGTGTTGCACTGCCTCCCGTAATAAATATTGAAG
CTAAAGCCTTCCTTGAAAATGAAGCTGTGGATTTAAAGATATCATTCTCTGATGAAGCAACTTACTTCGAGTAG
Protein sequenceShow/hide protein sequence
MEANSKPVVLHVTSNSDDESRSTGDSNTPSKPLKGTQNLISRRWCLTCLCSSVTLIKNYGGTGTEAIANTMDGKPVCRNCGGSGAISFIYLCSLFPMGCLLFFVLGDMCG
GTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGVALPPVINIEAKAFLENEAVDLKISFSDEATYFE