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Lsi10G010270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G010270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLipoxygenase
Genome locationchr10:14552844..14553119
RNA-Seq ExpressionLsi10G010270
SyntenyLsi10G010270
Gene Ontology termsGO:0006631 - fatty acid metabolic process (biological process)
GO:0034440 - lipid oxidation (biological process)
GO:0046394 - carboxylic acid biosynthetic process (biological process)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605891.1 Linoleate 13S-lipoxygenase 2-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2270.73Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEYLGKNME SW DNP IKAAF+               RNAD NLKNRT AGVTPYELLKPF GPGVTGKGVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

XP_022153765.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Momordica charantia]1.5e-2167.07Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+GKNME SW D+PVIKAAF+               RNAD +LKNRT AGVTPYELLKPF GPGVTGKGVPY++ I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

XP_022958148.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita moschata]1.8e-2270.73Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEYLGKNME SW DNP IKAAF+               RNAD NLKNRT AGVTPYELLKPF GPGVTGKGVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

XP_022995022.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita maxima]1.8e-2270.73Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEYLGKNME SW DNP IKAAF+               RNAD NLKNRT AGVTPYELLKPF GPGVTGKGVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

XP_023532782.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita pepo subsp. pepo]1.8e-2270.73Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEYLGKNME SW DNP IKAAF+               RNAD NLKNRT AGVTPYELLKPF GPGVTGKGVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

TrEMBL top hitse value%identityAlignment
A0A5D3DDW6 Lipoxygenase4.8e-2168.29Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEYLGKNME SW+DNP IKAAFE               RN D  LKNRT AGVTPYELLKP  GPGVTGKGVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

A0A6J1DHR2 Lipoxygenase7.4e-2267.07Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+GKNME SW D+PVIKAAF+               RNAD +LKNRT AGVTPYELLKPF GPGVTGKGVPY++ I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

A0A6J1DLP5 Lipoxygenase9.6e-2265.85Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+GK ME SW D+PVIKAAF+               RNADCNLKNRT AG+TPYELLKPF GPGVTGKGVP ++ I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

A0A6J1H2B7 Lipoxygenase8.7e-2370.73Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEYLGKNME SW DNP IKAAF+               RNAD NLKNRT AGVTPYELLKPF GPGVTGKGVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

A0A6J1JXK9 Lipoxygenase8.7e-2370.73Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEYLGKNME SW DNP IKAAF+               RNAD NLKNRT AGVTPYELLKPF GPGVTGKGVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

SwissProt top hitse value%identityAlignment
O24370 Linoleate 13S-lipoxygenase 2-1, chloroplastic1.8e-1754.88Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+G+ +E  W ++PVI AAFE               RN D  L NR  AGV PYELLKP+  PGVTGKGVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

O24371 Linoleate 13S-lipoxygenase 3-1, chloroplastic1.1e-1148.19Show/hide
Query:  HSPDEEYLG-KNMESSWDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEYLG ++  S+W  +  I  AF               ERNA+  LKNR  AGV PYELL P  GPGVT +GVP ++ I
Subjt:  HSPDEEYLG-KNMESSWDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

P38418 Lipoxygenase 2, chloroplastic3.8e-1552.44Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+G+  E+SW + PVI AAF               ERN +  LKNR  AGV  YELLKP    GVTG GVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

Q8GSM2 Lipoxygenase 2.3, chloroplastic2.4e-1448.78Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+G+  E +W   P++KAAFE               RN +   KNR  AG+ PYELLKPF  PGVTG+G+P +I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

R9WS04 Lipoxygenase 2, chloroplastic1.8e-1754.88Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+G +ME+SW+  P IK+AFE               RN D  L+NRT AG+  Y+LLKPF G GVTGKGVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAFE---------------RNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 32.2e-1043.37Show/hide
Query:  HSPDEEYLGKNMESS-WDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+G+  + S W  +  I  AF               +RNAD + +NR  AGV PYELL P   PGVT +GVP ++ I
Subjt:  HSPDEEYLGKNMESS-WDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein1.4e-0944.05Show/hide
Query:  HSPDEEYL--GKNMESSW-DDNPVI--------------KAAFERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEYL   + ++  W  D  V+              K   ERN D  LKNRT AG+ PYELL P    GVTG+G+P +I I
Subjt:  HSPDEEYL--GKNMESSW-DDNPVI--------------KAAFERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein1.4e-0940.96Show/hide
Query:  HSPDEEYLGKNMESS-WDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+G+  + S W  +  I  AF               +RN D + +NR  AGV PYEL+ P   PGVT +GVP ++ I
Subjt:  HSPDEEYLGKNMESS-WDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI

AT3G45140.1 lipoxygenase 22.7e-1652.44Show/hide
Query:  HSPDEEYLGKNMESSWDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI
        HSPDEEY+G+  E+SW + PVI AAF               ERN +  LKNR  AGV  YELLKP    GVTG GVPY+I I
Subjt:  HSPDEEYLGKNMESSWDDNPVIKAAF---------------ERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTTCACTCTCCAGATGAGGAGTATCTTGGGAAGAATATGGAGTCGTCGTGGGACGATAATCCTGTAATAAAGGCAGCATTTGAAAGGAATGCTGATTGCAACTT
GAAGAATAGAACTGAAGCTGGGGTTACACCTTACGAACTTTTGAAGCCGTTTTTAGGGCCTGGAGTGACTGGAAAGGGAGTTCCATACAATATTTATATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTTCACTCTCCAGATGAGGAGTATCTTGGGAAGAATATGGAGTCGTCGTGGGACGATAATCCTGTAATAAAGGCAGCATTTGAAAGGAATGCTGATTGCAACTT
GAAGAATAGAACTGAAGCTGGGGTTACACCTTACGAACTTTTGAAGCCGTTTTTAGGGCCTGGAGTGACTGGAAAGGGAGTTCCATACAATATTTATATTTAG
Protein sequenceShow/hide protein sequence
MLVHSPDEEYLGKNMESSWDDNPVIKAAFERNADCNLKNRTEAGVTPYELLKPFLGPGVTGKGVPYNIYI