CuGenDBv2

Gene ID	Lsi10G010420
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr10:14648270..14648701
RNA-Seq Expression	Lsi10G010420
Synteny	Lsi10G010420
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041389.1 uncharacterized protein E6C27_scaffold206G00350 [Cucumis melo var. makuwa]

3.7e-67

94.93

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Query:  MDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACIVP
        MDRIQ TSESPSTRLMVLSIEC+KGSSRADEWTGDMLQTGDIVEELTIGSSL VRSPFK+GRSGIQKILH SFK+KQTSILVRVRRGRDDFSELQACIVP
Subjt:  MDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACIVP

Query:  NDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        NDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQ SR
Subjt:  NDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

XP_004142132.1 uncharacterized protein LOC101208319 [Cucumis sativus]

1.3e-67

93.57

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Query:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI
        MPMDRIQ TSESPSTRLMVLSIEC+KGSSRADEWTGDMLQTGDIVEELTIGSSL VRSPFK+GRSGIQKILH SFK+KQTSILVRVRRGRDDFSELQACI
Subjt:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI

Query:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        VPNDSAG+KQYVLRSI+DPNYVVGFMDRTESECFDLQ SR
Subjt:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

XP_008449741.1 PREDICTED: uncharacterized protein LOC103491533 [Cucumis melo]

2.0e-68

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Query:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI
        MPMDRIQ TSESPSTRLMVLSIEC+KGSSRADEWTGDMLQTGDIVEELTIGSSL VRSPFK+GRSGIQKILH SFK+KQTSILVRVRRGRDDFSELQACI
Subjt:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI

Query:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQ SR
Subjt:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

XP_023511791.1 uncharacterized protein LOC111776701 [Cucurbita pepo subsp. pepo]

5.4e-66

90.71

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Query:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI
        MPMDRIQA+SESPSTRL+VLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSS+ VR+PFKNGRSGIQ+ILH SFK+KQTSI+VRVRRGRD+FSELQACI
Subjt:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI

Query:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        VPNDS GKKQYVLRSITDPNYVVGF+DRTESECFDLQ SR
Subjt:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

XP_038901635.1 uncharacterized protein LOC120088425 [Benincasa hispida]

1.8e-69

95.71

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Query:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI
        MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSL VRSPFKNGRSGIQ++LH+SFK+KQTSILVRVRRGRDDFSELQACI
Subjt:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI

Query:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQ SR
Subjt:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L1X8 Uncharacterized protein

6.2e-68

93.57

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Query:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI
        MPMDRIQ TSESPSTRLMVLSIEC+KGSSRADEWTGDMLQTGDIVEELTIGSSL VRSPFK+GRSGIQKILH SFK+KQTSILVRVRRGRDDFSELQACI
Subjt:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI

Query:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        VPNDSAG+KQYVLRSI+DPNYVVGFMDRTESECFDLQ SR
Subjt:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

A0A1S3BNN9 uncharacterized protein LOC103491533

9.6e-69

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Query:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI
        MPMDRIQ TSESPSTRLMVLSIEC+KGSSRADEWTGDMLQTGDIVEELTIGSSL VRSPFK+GRSGIQKILH SFK+KQTSILVRVRRGRDDFSELQACI
Subjt:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI

Query:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQ SR
Subjt:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

A0A5A7TJ47 Uncharacterized protein

1.8e-67

94.93

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Query:  MDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACIVP
        MDRIQ TSESPSTRLMVLSIEC+KGSSRADEWTGDMLQTGDIVEELTIGSSL VRSPFK+GRSGIQKILH SFK+KQTSILVRVRRGRDDFSELQACIVP
Subjt:  MDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACIVP

Query:  NDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        NDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQ SR
Subjt:  NDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

A0A5D3BD54 Uncharacterized protein

9.6e-69

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Query:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI
        MPMDRIQ TSESPSTRLMVLSIEC+KGSSRADEWTGDMLQTGDIVEELTIGSSL VRSPFK+GRSGIQKILH SFK+KQTSILVRVRRGRDDFSELQACI
Subjt:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI

Query:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQ SR
Subjt:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

A0A6J1FVS6 uncharacterized protein LOC111448931

2.6e-66

90.71

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Query:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI
        MPMDRIQA+SESPSTRL+VLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSS+ VR+PFKNGRSGIQ+ILH SFK+KQTSI+VRVRRGRD+FSELQACI
Subjt:  MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACI

Query:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
        VPNDS GKKQYVLRSITDPNYVVGF+DRTESECFDLQ SR
Subjt:  VPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G12070.1 unknown protein

1.2e-47

64.58

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Query:  MDRIQATSESPSTR---LMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGS---SLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSEL
        MDR     ESP+ R    +VLSI+CLKGSS+++EW+GDMLQTGDIVEE+ IGS   S   ++PFK G++ +QK+LH SF+ K+TSI+VRVRRG DDFS+L
Subjt:  MDRIQATSESPSTR---LMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGS---SLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSEL

Query:  QACIVPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR
         ACIVPN+SAGK+QY+LRSI DPNY VGF DRTES+C  LQ SR
Subjt:  QACIVPNDSAGKKQYVLRSITDPNYVVGFMDRTESECFDLQGSR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCCCATGGACCGAATTCAGGCAACCTCCGAATCCCCGAGCACCAGGCTGATGGTTCTGTCCATCGAATGTCTCAAAGGAAGCTCACGCGCCGACGAGTGGACCGGCGA
CATGCTTCAGACCGGCGACATAGTGGAGGAGCTAACCATCGGCTCGTCTCTCCGCGTTAGATCCCCTTTCAAGAACGGCCGCTCCGGAATCCAAAAGATTCTACACACTT
CCTTCAAGGAAAAGCAGACTTCCATCCTGGTTCGGGTCCGCCGTGGCCGAGACGACTTCTCCGAGTTGCAGGCCTGTATTGTCCCCAACGATTCCGCCGGAAAAAAGCAG
TACGTTCTCCGTTCCATCACTGACCCGAATTACGTGGTCGGGTTCATGGATCGCACCGAGTCTGAATGCTTCGACCTTCAAGGTTCGCGCCGTGTTTTTTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MPMDRIQATSESPSTRLMVLSIECLKGSSRADEWTGDMLQTGDIVEELTIGSSLRVRSPFKNGRSGIQKILHTSFKEKQTSILVRVRRGRDDFSELQACIVPNDSAGKKQ
YVLRSITDPNYVVGFMDRTESECFDLQGSRRVF

Lsi10G010420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome