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Lsi10G010660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G010660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR13
Genome locationchr10:14890340..14890699
RNA-Seq ExpressionLsi10G010660
SyntenyLsi10G010660
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010272.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4384.17Show/hide
Query:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ-KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFF
        MAPS   MATRTR NLPNLKL KKIKKTKKQQQQ+ KQIPAA  ND V FTDD +DIDGGCSTPK+ER RIPEILTCPPAPKKPRP SDCS RRSPIAFF
Subjt:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ-KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFF

Query:  APPELELFFFVALPVPDISV
        APPELEL FF ALPVPDISV
Subjt:  APPELELFFFVALPVPDISV

XP_022944116.1 cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita moschata]3.1e-4382.11Show/hide
Query:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ    KQIPAA  ND V FTDD +DIDGGCSTPK+ER RIP+ILTCPPAPKKPRP SDCS RRSPI
Subjt:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELEL FF ALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

XP_022986710.1 cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima]7.5e-4583.74Show/hide
Query:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ    KQIPA   ND V FTDDCSDIDGGCSTPK+ER RIPEILTCPPAPKKPRP SDCS RRSPI
Subjt:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELEL FF ALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

XP_023522908.1 cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo]1.8e-4383.47Show/hide
Query:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ--KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAF
        MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ  KQIPA   ND V FTDD +DIDGGCSTPK+ER RIPEILTCPPAPKKPRP SDCS RRSPIAF
Subjt:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ--KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAF

Query:  FAPPELELFFFVALPVPDISV
        FAPPELEL FF ALPVPDISV
Subjt:  FAPPELELFFFVALPVPDISV

XP_038902266.1 cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida]9.4e-4891.07Show/hide
Query:  MATRTRRNLPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELF
        MATRTRRNLPNLKLTKKIKKTKK QQQQ QIPA  QND VQFTD+CSD DGGCSTPK+ERHRIPEILTCPPAPKKPR VSDCSFRRSPIAFFAPPELELF
Subjt:  MATRTRRNLPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELF

Query:  FFVALPVPDISV
        FFV+LPVPDISV
Subjt:  FFVALPVPDISV

TrEMBL top hitse value%identityAlignment
A0A0A0L0Q1 Uncharacterized protein7.1e-4181.3Show/hide
Query:  MAPSVATMATR-TRRNLPNLKLTKKIKKT--KKQQQQQKQIPA-ATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS A MATR TRR LPNLKLTKKIKKT  KKQ  Q+ +IP   TQND V+F D+CS  DGGCSTPK+ERHRIPEILTCPPAPKKPR VSDCS RRSPI
Subjt:  MAPSVATMATR-TRRNLPNLKLTKKIKKT--KKQQQQQKQIPA-ATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELELFFFVALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

A0A6J1D3Z6 cyclin-dependent protein kinase inhibitor SMR15-like2.4e-3375.22Show/hide
Query:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFA
        MAPS   MA RTR N  +LKL KK+KKTKKQQQQ+   P AT+ND VQ ++D  DIDGGCSTP++ER RIPEI+TCPPAPKK RPVSDCSFRRSPIAFFA
Subjt:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFA

Query:  PPELELFFFVALP
        PPELELFFF ALP
Subjt:  PPELELFFFVALP

A0A6J1FTJ6 cyclin-dependent protein kinase inhibitor SMR131.5e-4382.11Show/hide
Query:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ    KQIPAA  ND V FTDD +DIDGGCSTPK+ER RIP+ILTCPPAPKKPRP SDCS RRSPI
Subjt:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELEL FF ALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

A0A6J1JET4 cyclin-dependent protein kinase inhibitor SMR133.6e-4583.74Show/hide
Query:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ    KQIPA   ND V FTDDCSDIDGGCSTPK+ER RIPEILTCPPAPKKPRP SDCS RRSPI
Subjt:  MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELEL FF ALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

A0A6J1K7R4 cyclin-dependent protein kinase inhibitor SMR9-like6.0e-3272.65Show/hide
Query:  MATRTRRNLPNLKLTKKIKK--TKKQQQQQKQIPAATQNDFVQFTD---DCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPP
        MATR RRN+PN KL KK+KK  TKK QQ Q QIP   QND VQF D   D  D+ GG STPK+ER RIPEILTCPP PKK RPVSDCSFRRSPIAFFAPP
Subjt:  MATRTRRNLPNLKLTKKIKK--TKKQQQQQKQIPAATQNDFVQFTD---DCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPP

Query:  ELELFFFVALPVPDISV
        ELELFFF++   PDISV
Subjt:  ELELFFFVALPVPDISV

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR131.2e-1366.67Show/hide
Query:  GGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF
        GGC TPK+++ RIPE+LTCPPAPKK R   +C  RR  I FFAPPE+ELFF
Subjt:  GGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF

Q3ECS5 Cyclin-dependent protein kinase inhibitor SMR93.9e-1260.71Show/hide
Query:  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVAL
        + GC TP  E+ RIPE+LTCPPAPKK +   +C+ RR  IAFFAPP++ELFF  AL
Subjt:  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVAL

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein2.3e-0441.67Show/hide
Query:  STPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF
        +TP +   RIP +  CP APKK +P   CS+      +F+PP+LE  F
Subjt:  STPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF

AT1G51355.1 unknown protein2.8e-1360.71Show/hide
Query:  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVAL
        + GC TP  E+ RIPE+LTCPPAPKK +   +C+ RR  IAFFAPP++ELFF  AL
Subjt:  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVAL

AT1G60783.1 unknown protein1.4e-0443.75Show/hide
Query:  STPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF
        +TP ++  RIP ++ CPPAPKK +     S+   P  FF+PP+LE  F
Subjt:  STPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF

AT3G20898.1 unknown protein8.6e-1566.67Show/hide
Query:  GGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF
        GGC TPK+++ RIPE+LTCPPAPKK R   +C  RR  I FFAPPE+ELFF
Subjt:  GGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF

AT5G40460.1 unknown protein3.1e-0431.25Show/hide
Query:  LPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIA--FFAPP-ELELFF
        +  + +   +K  K + +   +I    + D     ++CS      +TP ++  +IPE+L CPPAP+K RP   C   RS +   FF PP +LE  F
Subjt:  LPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIA--FFAPP-ELELFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCCTTCAGTAGCAACAATGGCCACAAGAACCAGAAGAAATTTACCCAACTTGAAGCTCACTAAGAAAATCAAGAAGACGAAGAAACAACAGCAGCAGCAGAAGCA
GATTCCGGCCGCCACACAAAACGATTTCGTTCAATTTACCGACGACTGTTCTGACATCGACGGCGGCTGCAGCACTCCAAAATCCGAGAGACACAGAATCCCGGAGATTC
TGACGTGTCCGCCGGCGCCGAAGAAACCAAGACCCGTTTCCGATTGCTCATTCCGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTTGTA
GCCCTGCCGGTGCCGGACATTTCAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCCTTCAGTAGCAACAATGGCCACAAGAACCAGAAGAAATTTACCCAACTTGAAGCTCACTAAGAAAATCAAGAAGACGAAGAAACAACAGCAGCAGCAGAAGCA
GATTCCGGCCGCCACACAAAACGATTTCGTTCAATTTACCGACGACTGTTCTGACATCGACGGCGGCTGCAGCACTCCAAAATCCGAGAGACACAGAATCCCGGAGATTC
TGACGTGTCCGCCGGCGCCGAAGAAACCAAGACCCGTTTCCGATTGCTCATTCCGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTTGTA
GCCCTGCCGGTGCCGGACATTTCAGTCTGA
Protein sequenceShow/hide protein sequence
MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFV
ALPVPDISV