CuGenDBv2

Gene ID	Lsi10G010880
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ankyrin repeat domain-containing protein 2A isoform X1
Genome location	chr10:15181466..15184412
RNA-Seq Expression	Lsi10G010880
Synteny	Lsi10G010880
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570418.1 Ankyrin repeat domain-containing protein 2A, partial [Cucurbita argyrosperma subsp. sororia]

5.1e-25

42.86

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKV-----FGGAFKRI-------------------------
        +VVE NRSEEQS VETTM+DIEALVD++SSIS  I+SSIS  FT P+I   + +  + +  V        A  R+                         
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKV-----FGGAFKRI-------------------------

Query:  -----------RVEAARYNDFDDVTSLASAGVCLDSKDSEGRT--------------------GCECFECREEYTT------------------------
                    V+AARYND DDV SLASAGV LDSKDSEGRT                    G +      E  T                        
Subjt:  -----------RVEAARYNDFDDVTSLASAGVCLDSKDSEGRT--------------------GCECFECREEYTT------------------------

Query:  -TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVSPVET
          L  HE+TPMDEALTRGKMDVIDAINTAVAQ+ELTGISVS +ET
Subjt:  -TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVSPVET

XP_022943787.1 ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita moschata]

2.0e-21

43.14

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG
        +VVE NRSEEQS VETTM+DIEAL                                               VEAARYND DDV SLASAGV LDSKDSEG
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG

Query:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
        RT                    G +      E  T                          L  HE+TPMDEALTRGKMDVIDAINTAVAQ+ELTGISVS
Subjt:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS

Query:  PVET
         +ET
Subjt:  PVET

XP_022987031.1 ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita maxima]

2.2e-20

42.65

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG
        MVVE NR EEQS V TT DDIEALVD                                               AARYND DDV SLASAGV LDSKDSEG
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG

Query:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
        RT                    G +      E  T                          L  HE+TPMDEALTRGKMDVIDAINTAVAQ+ELTGISVS
Subjt:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS

Query:  PVET
         +ET
Subjt:  PVET

XP_022987034.1 ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita maxima]

1.5e-21

43.14

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG
        +VVE NRSEEQS VETTM+DIEAL                                               VEAARYND DDV SLASAGV LDSKDSEG
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG

Query:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
        RT                    G +      E  T                          L  HE+TPMDEALTRGKMDVIDAINTAVAQ+ELTGISVS
Subjt:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS

Query:  PVET
         +ET
Subjt:  PVET

XP_038900447.1 ankyrin repeat-containing protein P16F5.05c isoform X1 [Benincasa hispida]

1.1e-22

44.33

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG
        MV+E NRSEEQS VETTM+DIE LVD                                               AARYNDFDDV SLASAGVCLDSKDS G
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG

Query:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
        RT                    G +      E  T                          L  HERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
Subjt:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS

Query:  PVE
         VE
Subjt:  PVE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7V7Q8 Ankyrin repeat-containing protein P16F5.05c isoform X1

2.7e-19

39.71

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG
        MVVE N+SEEQS V+TTM+DIE LVD                                               AARYND +DV  L SAGVCLDSKDSEG
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG

Query:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
        RT                    G +      E  T                          L  HE+TP+DEALTRGKMDVIDAINT  AQ+ELTGI+VS
Subjt:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS

Query:  PVET
         VET
Subjt:  PVET

A0A6J1FU05 ankyrin repeat domain-containing protein 2A isoform X2

9.8e-22

43.14

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG
        +VVE NRSEEQS VETTM+DIEAL                                               VEAARYND DDV SLASAGV LDSKDSEG
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG

Query:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
        RT                    G +      E  T                          L  HE+TPMDEALTRGKMDVIDAINTAVAQ+ELTGISVS
Subjt:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS

Query:  PVET
         +ET
Subjt:  PVET

A0A6J1FVA9 ankyrin repeat domain-containing protein 2A isoform X1

1.4e-20

42.65

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG
        MVVE NR EEQS V TT DDIEALVD                                               AARYND DDV SLASAGV LDSKDSEG
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG

Query:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
        RT                    G +      E  T                          L  HE+TPMDEALTRGKMDVIDAINTAVAQ+ELTGISVS
Subjt:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS

Query:  PVET
         +ET
Subjt:  PVET

A0A6J1JCZ1 ankyrin repeat domain-containing protein 2A isoform X1

1.1e-20

42.65

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG
        MVVE NR EEQS V TT DDIEALVD                                               AARYND DDV SLASAGV LDSKDSEG
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG

Query:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
        RT                    G +      E  T                          L  HE+TPMDEALTRGKMDVIDAINTAVAQ+ELTGISVS
Subjt:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS

Query:  PVET
         +ET
Subjt:  PVET

A0A6J1JHQ8 ankyrin repeat domain-containing protein 2A isoform X2

7.5e-22

43.14

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Query:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG
        +VVE NRSEEQS VETTM+DIEAL                                               VEAARYND DDV SLASAGV LDSKDSEG
Subjt:  MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEG

Query:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS
        RT                    G +      E  T                          L  HE+TPMDEALTRGKMDVIDAINTAVAQ+ELTGISVS
Subjt:  RT--------------------GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVS

Query:  PVET
         +ET
Subjt:  PVET

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G12320.1 ankyrin repeat family protein

7.7e-11

34.88

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Query:  VEAARYNDFDDVTSLASAGVCLDSKDSEGRTGCECFECR-----EEYTTTLGI----------------------------------------HERTPMD
        +EAARYND DD+ +LAS G+ L S+DS+GRT              EY  + G+                                        +ERTPMD
Subjt:  VEAARYNDFDDVTSLASAGVCLDSKDSEGRTGCECFECR-----EEYTTTLGI----------------------------------------HERTPMD

Query:  EALTRGKMDVIDAINTAVAQVELTGISVS
        EA+   KM++IDAINT VAQ+EL   S++
Subjt:  EALTRGKMDVIDAINTAVAQVELTGISVS

Sequences

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CDS sequence

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mRNA sequence

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ATGGTGGTGGAAACGAATCGATCAGAAGAGCAGAGCATCGTGGAAACGACGATGGATGACATTGAGGCTCTTGTTGATGTACAATCTTCAATCTCTTGCTTTATTGAATC
CTCTATTTCTGGTTTGTTCACTTTTCCTTCCATCGCAGAACATCTCCTCATCTTCTTATCGATCTTCTATAAAGTTTTCGGCGGTGCTTTTAAGCGAATTCGCGTTGAAG
CTGCTAGATACAATGATTTCGATGATGTAACAAGTCTTGCTTCTGCTGGTGTTTGTCTCGACTCCAAGGATTCCGAGGGCCGAACTGGATGTGAATGCTTTGAATGCAGA
GAAGAATACACCACTACATTGGGCATCCATGAGAGAACTCCCATGGATGAAGCTCTGACTCGGGGGAAAATGGATGTCATTGATGCAATCAACACAGCGGTGGCGCAAGT
CGAGCTCACTGGAATCAGTGTTTCACCTGTGGAAACATAGTTAAGGGAAATCAAAATTTTGATCTATTGGCTTAATATGTGAGAAAAGATTACGAGTCTTGTGAAGACTG
CAGGAAATAGAGATATGATGGTTCTATAAGATTAGAAAAATGCATCCATTAACTCTTATTTAGAGTTTCAAATGACCTTAAAATGATAATTATGCAGTCAACTCCCCTTA
GGGTATGTAATATACATTCTTTCGAACCCCACAAATATATTCTTCGTGACCTTTTAAGTTTAATTTGTTTTATTAGTTAAA

Protein sequence

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MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRTGCECFECR
EEYTTTLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVSPVET

Lsi10G010880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome