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Lsi10G010930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G010930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:15198727..15201113
RNA-Seq ExpressionLsi10G010930
SyntenyLsi10G010930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1873070.1 hypothetical protein Lal_00016190 [Lupinus albus]2.1e-0947.06Show/hide
Query:  PEKRKNPPRTVQIKEFPVMKSGEMALRKSTNELAIITMSQTTK-----------------TGAAKRIATASKNGRKMMALAI--RKMGRDSTVEERRKLR
        PEKRK  PRTVQI EFP MKSGE AL+KST ELA+ TMSQTTK                 TG AKRI T +K GRK   LAI    +    T+++R  + 
Subjt:  PEKRKNPPRTVQIKEFPVMKSGEMALRKSTNELAIITMSQTTK-----------------TGAAKRIATASKNGRKMMALAI--RKMGRDSTVEERRKLR

Query:  LKAK---RPNLSATPSSSL
         +A+   RP+L    S  L
Subjt:  LKAK---RPNLSATPSSSL
TrEMBL top hitse value%identityAlignment
A0A6A5MPB2 Uncharacterized protein1.0e-0947.06Show/hide
Query:  PEKRKNPPRTVQIKEFPVMKSGEMALRKSTNELAIITMSQTTK-----------------TGAAKRIATASKNGRKMMALAI--RKMGRDSTVEERRKLR
        PEKRK  PRTVQI EFP MKSGE AL+KST ELA+ TMSQTTK                 TG AKRI T +K GRK   LAI    +    T+++R  + 
Subjt:  PEKRKNPPRTVQIKEFPVMKSGEMALRKSTNELAIITMSQTTK-----------------TGAAKRIATASKNGRKMMALAI--RKMGRDSTVEERRKLR

Query:  LKAK---RPNLSATPSSSL
         +A+   RP+L    S  L
Subjt:  LKAK---RPNLSATPSSSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTGTTGTGGAAGCTCTACGAGCAAGAACAATCCAACAGAGCAATCGATACAACACAAAGAAAGCAATCATAATCCCAACATTCATCCACCGGAGATCCCCATCAA
GCCCTCTGTTCTTCAGCACATCGTCGCCGGTGAGAACGCAGAGCCGCCGTCGCCCTTGTTCGATCCACGAATAACACTCCGATTTCACATCCCAGTACTCATTCACCAGC
ATCGCCTCCAAAGGGTATCGATACAGCGAGATGTAGTACATGAACATCCAAAATTTCGGAATGTTCTGTTTCGGAATGAACCGGAGAAGAGGAAGAATCCGCCGAGGACG
GTGCAGATTAAGGAGTTTCCGGTTATGAAATCCGGAGAAATGGCGCTCAGGAAGAGCACTAATGAACTAGCCATCATCACGATGAGCCAAACGACGAAGACTGGAGCGGC
GAAGAGAATCGCGACGGCGAGCAAAAATGGGAGGAAGATGATGGCGTTGGCTATTAGGAAAATGGGGAGGGATTCTACTGTGGAAGAGAGAAGGAAACTGAGACTGAAAG
CAAAGAGGCCCAATCTTTCTGCAACTCCTTCTTCATCTCTTTTCACTCTCAGCCCAATTCCTCCAACAATGGCTTGCAATGTTCTACCTAGAAATAGTTGCTTTGTTCTG
TATAATAACTTCCAGAATCTTGAGCAAAGTAGCATAATCTCTAGGAAATGTGATGAGGAAAAGATTGATATCTGTTTACTGAGAGTAGCTCAACAACTTGAAGAGCAGAA
GTGCTGTCCAAGCCTGAAGTTGGTTCATCAAGCAGAAGAATTGGTGGATCATGAATCATTTCTACTCCAATTGAAACCCTTTTCCTCTCTCCTCCAGATATCCCTCTTTT
CTCTTCATCTCCTACAAAACTATCTGCCACATGAAACAAACCAAGCTCCTGCATTAATCTCTCTACTCTTTCTTCTTTCTCTTCTGAACCCAATTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTGTTGTGGAAGCTCTACGAGCAAGAACAATCCAACAGAGCAATCGATACAACACAAAGAAAGCAATCATAATCCCAACATTCATCCACCGGAGATCCCCATCAA
GCCCTCTGTTCTTCAGCACATCGTCGCCGGTGAGAACGCAGAGCCGCCGTCGCCCTTGTTCGATCCACGAATAACACTCCGATTTCACATCCCAGTACTCATTCACCAGC
ATCGCCTCCAAAGGGTATCGATACAGCGAGATGTAGTACATGAACATCCAAAATTTCGGAATGTTCTGTTTCGGAATGAACCGGAGAAGAGGAAGAATCCGCCGAGGACG
GTGCAGATTAAGGAGTTTCCGGTTATGAAATCCGGAGAAATGGCGCTCAGGAAGAGCACTAATGAACTAGCCATCATCACGATGAGCCAAACGACGAAGACTGGAGCGGC
GAAGAGAATCGCGACGGCGAGCAAAAATGGGAGGAAGATGATGGCGTTGGCTATTAGGAAAATGGGGAGGGATTCTACTGTGGAAGAGAGAAGGAAACTGAGACTGAAAG
CAAAGAGGCCCAATCTTTCTGCAACTCCTTCTTCATCTCTTTTCACTCTCAGCCCAATTCCTCCAACAATGGCTTGCAATGTTCTACCTAGAAATAGTTGCTTTGTTCTG
TATAATAACTTCCAGAATCTTGAGCAAAGTAGCATAATCTCTAGGAAATGTGATGAGGAAAAGATTGATATCTGTTTACTGAGAGTAGCTCAACAACTTGAAGAGCAGAA
GTGCTGTCCAAGCCTGAAGTTGGTTCATCAAGCAGAAGAATTGGTGGATCATGAATCATTTCTACTCCAATTGAAACCCTTTTCCTCTCTCCTCCAGATATCCCTCTTTT
CTCTTCATCTCCTACAAAACTATCTGCCACATGAAACAAACCAAGCTCCTGCATTAATCTCTCTACTCTTTCTTCTTTCTCTTCTGAACCCAATTCTCTAA
Protein sequenceShow/hide protein sequence
MHCCGSSTSKNNPTEQSIQHKESNHNPNIHPPEIPIKPSVLQHIVAGENAEPPSPLFDPRITLRFHIPVLIHQHRLQRVSIQRDVVHEHPKFRNVLFRNEPEKRKNPPRT
VQIKEFPVMKSGEMALRKSTNELAIITMSQTTKTGAAKRIATASKNGRKMMALAIRKMGRDSTVEERRKLRLKAKRPNLSATPSSSLFTLSPIPPTMACNVLPRNSCFVL
YNNFQNLEQSSIISRKCDEEKIDICLLRVAQQLEEQKCCPSLKLVHQAEELVDHESFLLQLKPFSSLLQISLFSLHLLQNYLPHETNQAPALISLLFLLSLLNPIL