CuGenDBv2

Gene ID	Lsi10G011230
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein DGS1, mitochondrial
Genome location	chr10:15480441..15486879
RNA-Seq Expression	Lsi10G011230
Synteny	Lsi10G011230
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0061745.1 protein DGS1 [Cucumis melo var. makuwa]

2.3e-73

77.55

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Query:  SLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGRCHFALLVF
        SL GTNAQKVYFLICERGPRAFFSGTVQLMRQSLR+GFSLQHVA EASLYIA RI+ILSNLRCHLAVFVAQ                           VF
Subjt:  SLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGRCHFALLVF

Query:  MEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSLISIL
        MEIDKI  EAV+GQENSLPSL VTLNGLF DLEASICQLHAT HMDFIDDS SFPLFEKVPDVNK+GSQWTSCEI DAINLL+QNLHKLDS IS L
Subjt:  MEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSLISIL

TYJ96085.1 protein DGS1 [Cucumis melo var. makuwa]

8.6e-73

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Query:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR
        K LQ      EGTNAQKVYFLICERGPRAFFSGTVQLMRQSLR+GFSLQHVA EASLYIA RI+ILSNLRCHLAVFVAQ                     
Subjt:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR

Query:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL
              VFMEIDKI  EAV+GQENSLPSL VTLNGLF DLEASICQLHAT HMDFIDDS SFPLFEKVPDVNK+GSQW SCEI DAINLL+QNLHKLDS 
Subjt:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL

Query:  ISIL
        IS L
Subjt:  ISIL

XP_008449612.1 PREDICTED: protein DGS1, mitochondrial [Cucumis melo]

8.6e-73

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Query:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR
        K LQ      EGTNAQKVYFLICERGPRAFFSGTVQLMRQSLR+GFSLQHVA EASLYIA RI+ILSNLRCHLAVFVAQ                     
Subjt:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR

Query:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL
              VFMEIDKI  EAV+GQENSLPSL VTLNGLF DLEASICQLHAT HMDFIDDS SFPLFEKVPDVNK+GSQW SCEI DAINLL+QNLHKLDS 
Subjt:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL

Query:  ISIL
        IS L
Subjt:  ISIL

XP_031743318.1 protein DGS1, mitochondrial [Cucumis sativus]

2.7e-74

75.98

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Query:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR
        K LQ      EGTNAQKVYFLICERGPRAFFSGTVQLMRQSLR+GFSLQHVAREASLYIA RI+ILSNLRCHLAVFVAQ                     
Subjt:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR

Query:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL
              VFMEIDKI  EAV+GQENSLPSL VTLNGLF DLEASICQLHAT HMDFIDDS SFPLFEKVPDVNK+GSQWTSCEI DAINLL+QNLHKLDS 
Subjt:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL

Query:  ISIL
        IS L
Subjt:  ISIL

XP_031743463.1 protein DGS1, mitochondrial [Cucumis sativus]

6.0e-74

75.49

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Query:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR
        K LQ      EGTNAQKVYFLICERGPRAFFSGTVQLMRQSLR+GFSLQHVAREASLYIA RI+ILSNLRCHLAVFVAQ                     
Subjt:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR

Query:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL
              VFMEIDKI  EAV+GQENSLPSL VTLNGLF DLEASICQLHAT HMDFIDD+ SFPLFEKVPDVNK+GSQWTSCEI DAINLL+QNLHKLDS 
Subjt:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL

Query:  ISIL
        IS L
Subjt:  ISIL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BN30 protein DGS1, mitochondrial

4.2e-73

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Query:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR
        K LQ      EGTNAQKVYFLICERGPRAFFSGTVQLMRQSLR+GFSLQHVA EASLYIA RI+ILSNLRCHLAVFVAQ                     
Subjt:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR

Query:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL
              VFMEIDKI  EAV+GQENSLPSL VTLNGLF DLEASICQLHAT HMDFIDDS SFPLFEKVPDVNK+GSQW SCEI DAINLL+QNLHKLDS 
Subjt:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL

Query:  ISIL
        IS L
Subjt:  ISIL

A0A5A7V7A5 Protein DGS1

1.1e-73

77.55

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Query:  SLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGRCHFALLVF
        SL GTNAQKVYFLICERGPRAFFSGTVQLMRQSLR+GFSLQHVA EASLYIA RI+ILSNLRCHLAVFVAQ                           VF
Subjt:  SLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGRCHFALLVF

Query:  MEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSLISIL
        MEIDKI  EAV+GQENSLPSL VTLNGLF DLEASICQLHAT HMDFIDDS SFPLFEKVPDVNK+GSQWTSCEI DAINLL+QNLHKLDS IS L
Subjt:  MEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSLISIL

A0A5D3BC94 Protein DGS1

4.2e-73

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Query:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR
        K LQ      EGTNAQKVYFLICERGPRAFFSGTVQLMRQSLR+GFSLQHVA EASLYIA RI+ILSNLRCHLAVFVAQ                     
Subjt:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR

Query:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL
              VFMEIDKI  EAV+GQENSLPSL VTLNGLF DLEASICQLHAT HMDFIDDS SFPLFEKVPDVNK+GSQW SCEI DAINLL+QNLHKLDS 
Subjt:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL

Query:  ISIL
        IS L
Subjt:  ISIL

A0A6J1FT53 protein DGS1, mitochondrial-like isoform X2

2.1e-72

72.55

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Query:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR
        K LQ      EGTNAQKVYF+ICERGPRAFFSGT QLMRQ+ R+GFSLQHVAREASLYIADRITILSNLRCHLAVFVAQ                     
Subjt:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR

Query:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL
              VFMEIDKI  EAVN Q+NSLPSL VTLNGLF DLEASICQLHA H MD +D SFSFPLFEK+PDVNK+GSQWTSCEI DAINLL+QNLHKLDS 
Subjt:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL

Query:  ISIL
        I IL
Subjt:  ISIL

A0A6J1FUH4 protein DGS1, mitochondrial-like isoform X3

2.1e-72

72.55

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Query:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR
        K LQ      EGTNAQKVYF+ICERGPRAFFSGT QLMRQ+ R+GFSLQHVAREASLYIADRITILSNLRCHLAVFVAQ                     
Subjt:  KELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGR

Query:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL
              VFMEIDKI  EAVN Q+NSLPSL VTLNGLF DLEASICQLHA H MD +D SFSFPLFEK+PDVNK+GSQWTSCEI DAINLL+QNLHKLDS 
Subjt:  CHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSL

Query:  ISIL
        I IL
Subjt:  ISIL

SwissProt top hits

e value

%identity

Alignment

Q8GUK1 Protein DGS1, mitochondrial

4.8e-34

37.98

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Query:  MQKELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLL
        +QK L       EG+NA+K YF+I ERGP AF + + + + +SL    ++QH+ + +S ++ +R+ +L  LR  LA F+AQ                   
Subjt:  MQKELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLL

Query:  GRCHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMD-FIDDSFSFPL-FEKVPDVNKDGSQWTSCEIDDAINLLHQNLHK
                +++E+DK  E+ V   E +LPSL   +NGLF +LE S   LHA    D  +D S+  PL F+++P+VN++GSQWT CE+ DAINL+H+NL K
Subjt:  GRCHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMD-FIDDSFSFPL-FEKVPDVNKDGSQWTSCEIDDAINLLHQNLHK

Query:  LDSLISIL
        L+S +S++
Subjt:  LDSLISIL

Arabidopsis top hits

e value

%identity

Alignment

AT5G12290.1 dgd1 suppressor 1

3.4e-35

37.98

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Query:  MQKELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLL
        +QK L       EG+NA+K YF+I ERGP AF + + + + +SL    ++QH+ + +S ++ +R+ +L  LR  LA F+AQ                   
Subjt:  MQKELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLL

Query:  GRCHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMD-FIDDSFSFPL-FEKVPDVNKDGSQWTSCEIDDAINLLHQNLHK
                +++E+DK  E+ V   E +LPSL   +NGLF +LE S   LHA    D  +D S+  PL F+++P+VN++GSQWT CE+ DAINL+H+NL K
Subjt:  GRCHFALLVFMEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMD-FIDDSFSFPL-FEKVPDVNKDGSQWTSCEIDDAINLLHQNLHK

Query:  LDSLISIL
        L+S +S++
Subjt:  LDSLISIL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGAAGGAACTACAAGGAAAATTCCTCTCGTTAGAAGGTACAAATGCTCAAAAAGTTTACTTTCTGATTTGTGAGAGAGGTCCAAGGGCGTTTTTTAGTGGAACAGT
GCAGTTAATGCGCCAAAGTTTAAGGAATGGTTTTTCCTTACAACATGTAGCTCGTGAGGCATCTCTTTACATAGCTGACCGGATAACTATATTGAGCAACTTAAGATGTC
ATCTTGCAGTTTTTGTGGCTCAGGGCCACAATGTTGTATCCTTTGTGGGAGAGCGTCAAGAGGATCTTGATCACCTTCTAGGGAGATGTCATTTTGCCTTGTTGGTTTTT
ATGGAAATCGACAAAATTGCGGAAGAGGCAGTGAATGGTCAAGAAAATTCCTTACCATCATTGTTCGTCACATTGAATGGCTTATTTTTCGATCTAGAGGCATCAATTTG
TCAACTGCATGCAACACATCATATGGATTTTATCGATGACAGCTTTTCATTTCCTCTATTTGAAAAAGTTCCAGATGTTAACAAGGATGGATCTCAGTGGACGAGTTGTG
AAATTGATGATGCTATCAACTTGCTTCATCAGAACCTTCACAAGTTGGACTCTTTGATATCTATTCTTTCTAGAGGGATGGGGAGAGTCACTGCGGATAGAAAAGTGTTC
TCTGTTAACAAGAGTGGAAATGGGAGAAGGATTTTTTTAGAAGAGAGGAAAGGTGTAAAGGTTGGTAAGATCGATTTGGAGCTGGGCACATTGCCTTGGGTTAGAGATTG
TCTGGTGGTTGTTAAGGAGTTGAGCAATCACGTTGGTTTTTGGCATAGGAGAAGGTTAGATTCGACAATTATCTTCTTTCATGTTCTCTCTAATGCAAGGGGCCGTTTTG
CTCTTTTATCGCTAGAATCTTTTAAGGGAAGGAGATCTCAAGTTTTCATTCTACAAGGACAAAAGGCTGTGGGATGGAGTGCGGTTACCAAGGAGTTCTCTGATCTTCTT
CCCTACCTCGTCTCAATTAGAATCAAGAGTCCTCAACAGGAGAGTCATTCTGATGTTCATCTGTTAAGAAGAATGGTAAGAGAGTCGGAGGCTTGGGTAGCAAGAAGCGA
TGAGAGTAGAGTTGTGATTAAGGAAAAAAGAGGTCTAATTGAAGGTTCAGACTTGAGAGGGGTGAATAATTGGCTCGAAGAAGTCTGTTTTGAGGCAAAAGGAAATTTGA
ATGGCTTTACTTCGTTGGGTTGCTTCATCAACCATGAGAGTTGCTCCTTTTCGTCTGACCAAGGGATTGATGTCAGGTCAATTTGTATAGAGGGTTGTCAGTCATGTGAA
GGCCTCAGGGAGACGACAAAACTTTCAGGGAAGAAGTATCCAGCGGTTGAGTTGGTCTCTAGTGGGCCTGTTCTTTTGGAGGCCCATCGACCCCTAGACGTCCTACCCAA
AACATCAGCTAGGATGCGGGATCCCAGTGGTGGTAATGGACCTGTTTTATTGGAGACCCACAAGCCCATTGAAGTTATGACCAAAACCTTAGAGAGGGCTTGCGGAAAGG
AGAACTCAGTGGATCAGGTTGGGCTGTGTGCGCTTGAGGAGTTTAGAGGATTGTTGTGGGAAAAAGCCATGGGTGTTGGGGCGGATGATCCTTTAGACAATGATGAGGAT
TTCTGCTTAGATTTGTCTATCATTAGTTATTCCGAGGATGAGTCCTTGTTAACGCTGGTCATCCAAGAGCTGGATCCTTCGAGTAATATCAAGATGCTGTTTCAGGAAGG
CGAGACTTCGAAAGCGCACAGTCGGAAAGGCATTCACGGGTTCGCTTAA

mRNA sequence

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Protein sequence

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MQKELQGKFLSLEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRNGFSLQHVAREASLYIADRITILSNLRCHLAVFVAQGHNVVSFVGERQEDLDHLLGRCHFALLVF
MEIDKIAEEAVNGQENSLPSLFVTLNGLFFDLEASICQLHATHHMDFIDDSFSFPLFEKVPDVNKDGSQWTSCEIDDAINLLHQNLHKLDSLISILSRGMGRVTADRKVF
SVNKSGNGRRIFLEERKGVKVGKIDLELGTLPWVRDCLVVVKELSNHVGFWHRRRLDSTIIFFHVLSNARGRFALLSLESFKGRRSQVFILQGQKAVGWSAVTKEFSDLL
PYLVSIRIKSPQQESHSDVHLLRRMVRESEAWVARSDESRVVIKEKRGLIEGSDLRGVNNWLEEVCFEAKGNLNGFTSLGCFINHESCSFSSDQGIDVRSICIEGCQSCE
GLRETTKLSGKKYPAVELVSSGPVLLEAHRPLDVLPKTSARMRDPSGGNGPVLLETHKPIEVMTKTLERACGKENSVDQVGLCALEEFRGLLWEKAMGVGADDPLDNDED
FCLDLSIISYSEDESLLTLVIQELDPSSNIKMLFQEGETSKAHSRKGIHGFA

Lsi10G011230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome