; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G011240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G011240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein DGS1, mitochondrial
Genome locationchr10:15487259..15489755
RNA-Seq ExpressionLsi10G011240
SyntenyLsi10G011240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010315.1 Protein DGS1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4560Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEA P+ESE+KG+ SSISLYSLRLWNQIV+FLPS RDSNF+WKLSSLL RRRRKTGLPLPLPL SINSSV                    T Y LV    
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEA
          + +D  VL ++   R          LS                LTVTGWEP EASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEA
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEA
XP_022943965.1 protein DGS1, mitochondrial-like isoform X1 [Cucurbita moschata]6.1e-4455.9Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEA P+ESE+KG+ SSISLYSLRLWNQIV+FLPS RDSNF+WKLSSLL RRRRKTGLPLPLPL SINSSV                              
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
          I+  W+                    S  + S           LTVTGWEP EASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAE  +A K
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
XP_023512780.1 protein DGS1, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]4.0e-4354.87Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEA P+ESE+KG+ SSISLYSLR+WNQIV+FLPS RDSNF+WKLSS L RRRRKTGLPLPLPL SINSSV                              
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
          I+  W+                    S  + S           LTVTGWEP EASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAE  +A K
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
XP_038902646.1 protein DGS1, mitochondrial isoform X1 [Benincasa hispida]9.5e-4555.38Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEATPKESEDKG+ +SISLYSLRLWNQIVSFLPSRRDSNF+WKLS+LL RRRRKTGLPLPLPL SINSSV                              
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
                                                     LTVTGWEP EASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAE  +A K
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
XP_038902647.1 protein DGS1, mitochondrial isoform X2 [Benincasa hispida]9.5e-4555.38Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEATPKESEDKG+ +SISLYSLRLWNQIVSFLPSRRDSNF+WKLS+LL RRRRKTGLPLPLPL SINSSV                              
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
                                                     LTVTGWEP EASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAE  +A K
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
TrEMBL top hitse value%identityAlignment
A0A1S3BN30 protein DGS1, mitochondrial4.7e-4252.31Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEATP ESEDKG+ SSISLYS  LWNQIVSF+PSR DSNF+WKLSSLL R+RRKTGLP+PLPL SINSSV                              
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
                                                     LTVTGWEP EASRLYDVLGDLLEHCF NLHSIWKNLQFWQSRAE  +A K
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
A0A5D3BC94 Protein DGS14.7e-4252.31Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEATP ESEDKG+ SSISLYS  LWNQIVSF+PSR DSNF+WKLSSLL R+RRKTGLP+PLPL SINSSV                              
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
                                                     LTVTGWEP EASRLYDVLGDLLEHCF NLHSIWKNLQFWQSRAE  +A K
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
A0A6J1FT53 protein DGS1, mitochondrial-like isoform X23.3e-4353.85Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEA P+ESE+KG+ SSISLYSLRLWNQIV+FLPS RDSNF+WKLSSLL RRRRKTGLPLPLPL SINSSV                              
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
                                                     LTVTGWEP EASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAE  +A K
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
A0A6J1FYE1 protein DGS1, mitochondrial-like isoform X13.0e-4455.9Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEA P+ESE+KG+ SSISLYSLRLWNQIV+FLPS RDSNF+WKLSSLL RRRRKTGLPLPLPL SINSSV                              
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
          I+  W+                    S  + S           LTVTGWEP EASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAE  +A K
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
A0A6J1JE15 protein DGS1, mitochondrial-like isoform X11.2e-4254.36Show/hide
Query:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF
        MEA P+ESE+KG+ SSISLYSLR+WNQI +FLPS RDSNF+WK SSLL RRRRKTGLPLPLPL SINSSV                              
Subjt:  MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLF

Query:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
          I+  W+                    S  + S           LTVTGWEP EASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAE  +A K
Subjt:  LLISLDWKVLYVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12290.1 dgd1 suppressor 11.0e-0432.56Show/hide
Query:  SKPLSLAFLSS---HSASYPKRILTPL-------KYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK
        SKP+ L  +S+    + S  + I  PL          T+T     + +R++ VL +++     NLH I K+L FW+SRAE  +A K
Subjt:  SKPLSLAFLSS---HSASYPKRILTPL-------KYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAACGCCAAAAGAAAGTGAAGACAAGGGCATGGGATCCTCAATTTCATTATACTCCCTTCGTTTATGGAACCAAATTGTATCATTTTTGCCATCTCGTCGTGA
TTCCAATTTTATTTGGAAGCTTTCGAGTCTCCTTAGCCGGAGGAGACGCAAGACTGGTCTTCCTCTTCCTCTACCTTTGTACTCGATAAACTCTTCTGTATACAAATATT
GTGATTCTGTTCATTATATGGCCTCTCGACTGGGTGCCCTTCAGGCCTTCACAAAGTATTGTTTGGTGACTACCCTGTTTTTGTTGATCAGCCTAGATTGGAAGGTTCTA
TATGTAATAGGTTTCCTTCGTGGGGTTTCAAAGCCCCTTTCACTGGCCTTTCTTTCAAGTCATAGTGCCAGTTACCCAAAACGCATCTTAACCCCTCTAAAGTATTTAAC
AGTAACTGGCTGGGAACCAACAGAAGCATCTAGACTGTACGATGTTTTGGGTGATCTTTTGGAGCACTGTTTCTTGAATTTACATAGCATTTGGAAGAACTTGCAATTTT
GGCAATCTCGTGCAGAGGCAAAAGATGCCAGTAAGAAAATTTAG
mRNA sequenceShow/hide mRNA sequence
GAAAAAAAAGGTTGTGTTGTAATGGAAAACGAGAAAGAATAAAGAAAAAGGAAAAGACACTGTGCGTAAAATTAGTCTTATTTTACCTTCCAAGTTTCCAGGTGCTCGCT
TCCTCAACAGAAATTTGCTGAAGAGGAGAAGCTCAGCTCCAATGGAGGCAACGCCAAAAGAAAGTGAAGACAAGGGCATGGGATCCTCAATTTCATTATACTCCCTTCGT
TTATGGAACCAAATTGTATCATTTTTGCCATCTCGTCGTGATTCCAATTTTATTTGGAAGCTTTCGAGTCTCCTTAGCCGGAGGAGACGCAAGACTGGTCTTCCTCTTCC
TCTACCTTTGTACTCGATAAACTCTTCTGTATACAAATATTGTGATTCTGTTCATTATATGGCCTCTCGACTGGGTGCCCTTCAGGCCTTCACAAAGTATTGTTTGGTGA
CTACCCTGTTTTTGTTGATCAGCCTAGATTGGAAGGTTCTATATGTAATAGGTTTCCTTCGTGGGGTTTCAAAGCCCCTTTCACTGGCCTTTCTTTCAAGTCATAGTGCC
AGTTACCCAAAACGCATCTTAACCCCTCTAAAGTATTTAACAGTAACTGGCTGGGAACCAACAGAAGCATCTAGACTGTACGATGTTTTGGGTGATCTTTTGGAGCACTG
TTTCTTGAATTTACATAGCATTTGGAAGAACTTGCAATTTTGGCAATCTCGTGCAGAGGCAAAAGATGCCAGTAAGAAAATTTAG
Protein sequenceShow/hide protein sequence
MEATPKESEDKGMGSSISLYSLRLWNQIVSFLPSRRDSNFIWKLSSLLSRRRRKTGLPLPLPLYSINSSVYKYCDSVHYMASRLGALQAFTKYCLVTTLFLLISLDWKVL
YVIGFLRGVSKPLSLAFLSSHSASYPKRILTPLKYLTVTGWEPTEASRLYDVLGDLLEHCFLNLHSIWKNLQFWQSRAEAKDASKKI