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Lsi10G011300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G011300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase
Genome locationchr10:15574666..15575249
RNA-Seq ExpressionLsi10G011300
SyntenyLsi10G011300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061739.1 hypothetical protein E6C27_scaffold212G001140 [Cucumis melo var. makuwa]1.6e-8295.73Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        MESRFGDGPLPQNFDGLEQKFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHA RRDELLRRES+ARQHQYQKGIMDHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        DPRGNSGVT LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDT SRYY
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY

TYJ96079.1 hypothetical protein E5676_scaffold182G00380 [Cucumis melo var. makuwa]1.6e-8295.73Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        MESRFGDGPLPQNFDGLEQKFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHA RRDELLRRES+ARQHQYQKGIMDHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        DPRGNSGVT LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDT SRYY
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY

XP_004140174.2 uncharacterized protein LOC101221687 isoform X1 [Cucumis sativus]3.1e-8195.68Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        MESRFGDGPLPQNFDGLEQKFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHA RRDELLRRES+ARQHQYQKGIMDHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSR
        DPRGNSGVT LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDT SR
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSR

XP_031744069.1 uncharacterized protein LOC101221687 isoform X2 [Cucumis sativus]1.4e-8195.09Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        MESRFGDGPLPQNFDGLEQKFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHA RRDELLRRES+ARQHQYQKGIMDHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRY
        DPRGNSGVT LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDT SR+
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRY

XP_038901321.1 uncharacterized protein LOC120088240 [Benincasa hispida]2.3e-8497.56Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        ME+RFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERI+AINAQYEEQLAALRARHA RRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        DPRGNSGVT LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY

TrEMBL top hitse value%identityAlignment
A0A0A0KI70 Uncharacterized protein3.5e-8395.73Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        MESRFGDGPLPQNFDGLEQKFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHA RRDELLRRES+ARQHQYQKGIMDHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        DPRGNSGVT LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDT SRYY
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY

A0A1S3BME9 uncharacterized protein LOC1034914403.3e-8195.68Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        MESRFGDGPLPQNFDGLEQKFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHA RRDELLRRES+ARQHQYQKGIMDHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSR
        DPRGNSGVT LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDT SR
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSR

A0A5A7V7U3 Uncharacterized protein7.9e-8395.73Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        MESRFGDGPLPQNFDGLEQKFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHA RRDELLRRES+ARQHQYQKGIMDHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        DPRGNSGVT LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDT SRYY
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY

A0A5D3BAP0 Uncharacterized protein7.9e-8395.73Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        MESRFGDGPLPQNFDGLEQKFIDDIIKL KEQNDAEDEENARHRERI+AINAQYEEQLAALR RHA RRDELLRRES+ARQHQYQKGIMDHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        DPRGNSGVT LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDT SRYY
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY

A0A6J1DFR7 uncharacterized protein LOC1110206621.6e-8092.68Show/hide
Query:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG
        MESRFG+G LPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHR+RI+AINAQYEEQLAALRARHA RRDELLRRESS RQHQYQKG++DHYPNGGIGPG
Subjt:  MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPG

Query:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        DPRGNSGVT LAA+GQAHQNY+SEHFDSFRERARFLGNSARDPNLDPRG YPGGRVYDTGSRYY
Subjt:  DPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22040.1 unknown protein1.8e-3450.61Show/hide
Query:  QNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQK---GIMDHYPNGGIG------PGDP
        Q F+GLEQKF+DDI +LAK+Q +AED E ARHRE+I  INA+YEEQLA LRARH  +R+E++R+ES ARQ Q+++   G+MD Y    +G       G P
Subjt:  QNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQK---GIMDHYPNGGIG------PGDP

Query:  RG--NSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        +G   S     A +    ++Y S+ F+++ ERARF G + RD   +PRG YPGG VYDT SR+Y
Subjt:  RG--NSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY

AT5G22040.2 unknown protein1.8e-3450.61Show/hide
Query:  QNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQK---GIMDHYPNGGIG------PGDP
        Q F+GLEQKF+DDI +LAK+Q +AED E ARHRE+I  INA+YEEQLA LRARH  +R+E++R+ES ARQ Q+++   G+MD Y    +G       G P
Subjt:  QNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQK---GIMDHYPNGGIG------PGDP

Query:  RG--NSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        +G   S     A +    ++Y S+ F+++ ERARF G + RD   +PRG YPGG VYDT SR+Y
Subjt:  RG--NSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY

AT5G22040.3 unknown protein1.8e-3450.61Show/hide
Query:  QNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQK---GIMDHYPNGGIG------PGDP
        Q F+GLEQKF+DDI +LAK+Q +AED E ARHRE+I  INA+YEEQLA LRARH  +R+E++R+ES ARQ Q+++   G+MD Y    +G       G P
Subjt:  QNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQK---GIMDHYPNGGIG------PGDP

Query:  RG--NSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY
        +G   S     A +    ++Y S+ F+++ ERARF G + RD   +PRG YPGG VYDT SR+Y
Subjt:  RG--NSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTAGGTTTGGAGACGGTCCGCTGCCACAGAATTTTGATGGTCTCGAGCAGAAATTTATTGATGATATCATTAAATTGGCCAAGGAACAAAATGATGCAGAGGA
TGAGGAAAATGCTAGACATAGAGAGAGAATCATGGCCATCAATGCTCAGTATGAGGAACAATTAGCAGCACTTCGAGCTCGGCATGCTAATCGTCGTGATGAGTTACTAC
GAAGAGAATCAAGTGCACGACAACATCAGTACCAGAAGGGAATAATGGACCATTACCCGAATGGGGGCATTGGCCCAGGTGATCCTCGTGGCAATAGTGGAGTAACAACC
TTAGCTGCTTCTGGACAAGCACATCAAAATTATGAATCTGAACACTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGAAATTCTGCCCGGGATCCTAATTTGGATCC
TAGAGGTTCCTATCCTGGGGGCCGAGTTTATGACACTGGCTCACGGTACTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTAGGTTTGGAGACGGTCCGCTGCCACAGAATTTTGATGGTCTCGAGCAGAAATTTATTGATGATATCATTAAATTGGCCAAGGAACAAAATGATGCAGAGGA
TGAGGAAAATGCTAGACATAGAGAGAGAATCATGGCCATCAATGCTCAGTATGAGGAACAATTAGCAGCACTTCGAGCTCGGCATGCTAATCGTCGTGATGAGTTACTAC
GAAGAGAATCAAGTGCACGACAACATCAGTACCAGAAGGGAATAATGGACCATTACCCGAATGGGGGCATTGGCCCAGGTGATCCTCGTGGCAATAGTGGAGTAACAACC
TTAGCTGCTTCTGGACAAGCACATCAAAATTATGAATCTGAACACTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGAAATTCTGCCCGGGATCCTAATTTGGATCC
TAGAGGTTCCTATCCTGGGGGCCGAGTTTATGACACTGGCTCACGGTACTACTAA
Protein sequenceShow/hide protein sequence
MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPGDPRGNSGVTT
LAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY